| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,356,815 | A→C | 8.8% | V649G (GTT→GGT) | infB ← | translation initiation factor IF‑2 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,356,815 | 0 | A | C | 8.8% | 227.6 / 10.4 | 78 | V649G (GTT→GGT) | infB | translation initiation factor IF‑2 |
| Reads supporting (aligned to +/- strand): ref base A (34/37); new base C (4/3); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.20e-01 | |||||||||||
TGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCTCGTCGGCAA > NC_002947/5356667‑5356959 | tGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCGAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGaa > 6:329650/1‑149 (MQ=255)tGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGaa > 6:135501/1‑149 (MQ=255) cATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCGGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAAc > 1:160862/1‑148 (MQ=255) cATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAAc > 5:12898/1‑148 (MQ=255) ttCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGAt < 6:223488/149‑1 (MQ=255) ttCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGCTCTTGAGAACGAt > 8:61663/1‑149 (MQ=255) aGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGTTCTCAAGACCGATGtgcg < 7:115092/149‑4 (MQ=255) aGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGt > 7:51815/1‑149 (MQ=255) ccAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTttc > 1:8727/1‑149 (MQ=255) gTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTtcttct < 8:51815/149‑1 (MQ=255) aTCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACg > 2:72216/1‑124 (MQ=255) aTCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACg < 1:72216/124‑1 (MQ=255) gCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGTTCTCAAGACCGATGt < 7:319790/125‑1 (MQ=255) gCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGTTCTCAAGACCGATGt > 8:319790/1‑125 (MQ=255) gCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTTCTGa < 8:71369/148‑1 (MQ=255) gCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGAc > 6:138862/1‑149 (MQ=255) tcGGTGATACCAACGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGAccc < 6:36443/147‑1 (MQ=255) ggTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATg < 6:221594/148‑1 (MQ=255) aTACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGtctc < 5:138862/149‑1 (MQ=255) accaccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCACAGAACCACGCACATCGGTCTAGAGAACGAGGTTGAGGGTTTTCATCTCTTCCTCACCCAAGCTCTCg > 5:388930/1‑148 (MQ=255) ccaccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGa < 3:75837/148‑1 (MQ=255) caccGACGCCCCCCCCAATCACGCGCACTTGCACTTCGGAGTTGCCCCGGCCGCCGAGCGAACACTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGCGGGTTGTCTTCTCTTACTGCCCAAGGGtcagctcg > 8:234199/1‑143 (MQ=255) caccGACGCCACCACCAATCACGCTCACTTTCACTTCGTCGTTGCCCAGTCAGCCTAGCGAACCCTGCAGCTCTTCCAGAGAACCACTCACATCTGGAGTGAGCACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATggg < 7:234199/142‑2 (MQ=255) caccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGt < 7:234195/142‑1 (MQ=255) caccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGt > 8:234195/1‑142 (MQ=255) ccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCTCTTACAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGAt < 1:41215/149‑1 (MQ=255) ccGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGAt < 8:45053/149‑1 (MQ=255) aCGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCGAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGtt < 5:329650/149‑1 (MQ=255) accaccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCa < 5:135501/149‑1 (MQ=255) caccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTttc < 2:363865/110‑1 (MQ=255) caccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTttc > 1:363865/1‑110 (MQ=255) ccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCtt > 2:278790/1‑149 (MQ=255) ccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCtt > 3:370982/1‑149 (MQ=255) ccaATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCtt > 3:66418/1‑149 (MQ=255) aCGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGc > 5:84861/1‑149 (MQ=255) aCGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGc > 5:14267/1‑149 (MQ=255) aCGCGCACTTGCACTTCGGCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGc < 3:324286/149‑1 (MQ=255) acttCGTCGTTGCCCGGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGc < 2:160862/149‑1 (MQ=255) acttCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGATTCCAGAGAACCACGCAAATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTACTGACACATCGTCTCGAAGATGTTTTCCAGCTTGCAGGCGTGAGCACggcc > 6:353699/1‑147 (MQ=255) ccAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACgg < 8:191830/134‑1 (MQ=255) ccAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACgg > 7:191830/1‑134 (MQ=255) gccgccGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGa > 2:145188/1‑148 (MQ=255) ccgccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATa < 1:278790/149‑1 (MQ=255) cgccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGTTCTCAAGACCGATGtgcg > 2:336657/1‑60 (MQ=25) cgccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGTTCTCAAGACCGATGtgcg < 1:336657/63‑4 (MQ=25) cgccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTcg > 5:122126/1‑143 (MQ=255) cgccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTcg < 6:122126/143‑1 (MQ=255) gccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACt > 5:130172/1‑149 (MQ=255) gccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACt > 4:221144/1‑149 (MQ=255) ccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACtt < 6:12898/149‑1 (MQ=255) ccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACtt > 3:205048/1‑149 (MQ=255) ccgAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCGTGACCTCGCGCTACtt > 7:281491/1‑149 (MQ=255) gAGCGAAGCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTGTTCTCTTCCGGACCCATGGTCTCGAAGATGTTTTc < 1:34172/102‑1 (MQ=255) gAGCGAACCCTGCAGAGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTACGGACCCATGGTCTCGAAGATGATTTc > 2:34172/1‑102 (MQ=255) aGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTCCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGcc < 2:8727/149‑1 (MQ=255) cAGCGCTTCCAGATAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGATCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACa < 5:353699/149‑1 (MQ=255) gcgcTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc > 6:32214/1‑141 (MQ=255) gcgcTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc < 5:32214/141‑1 (MQ=255) gcgcTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTCTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc < 1:76045/141‑1 (MQ=255) gcgcTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTCTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGAc > 2:76045/1‑141 (MQ=255) cTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCCTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGATGGAACAGGGc > 4:299692/1‑148 (MQ=255) ccAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCa < 6:282420/84‑1 (MQ=255) ccAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCa > 5:282420/1‑84 (MQ=255) cAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGc < 8:274302/93‑1 (MQ=255) cAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGc > 7:274302/1‑93 (MQ=255) agagAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACtt > 7:358456/1‑148 (MQ=255) gagaACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGa < 1:30868/111‑1 (MQ=255) gagaACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGa > 2:30868/1‑111 (MQ=255) aCCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACgg < 7:61663/148‑1 (MQ=255) ccACGCACATCGGTGTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACggg < 6:388930/148‑1 (MQ=255) ccACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGc < 3:221144/149‑1 (MQ=255) cctcaacaTCGTTCTCAAGACCGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTGGACGGAACAGGGCAACTTCCCGGGcg > 7:254928/6‑148 (MQ=255) tcaacaTCGTTCTCAAGACCGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCttt > 7:18219/4‑149 (MQ=255) cGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCttt < 4:205048/149‑1 (MQ=255) acaTCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTttctt < 6:84861/149‑1 (MQ=255) acaTCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTttctt < 4:66418/149‑1 (MQ=255) aTCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTAGCCGGCGTGAGCACGGGCCAGCTTCACATCCCGATACTTCCGTTGACGGAACAGGGCCTCTGAAAGGGCTttctagt > 8:74098/1‑146 (MQ=255) tCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCtcgtcg < 1:145188/149‑1 (MQ=255) tCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCtcgtcg < 6:14267/149‑1 (MQ=255) gagaACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCTCGTCGGCaa > 6:222231/1‑149 (MQ=255) | TGCATTCGAAGCCAGCGCCAGGTTGGCATCGCTCTCGGTGATACCACCGACGCCACCACCAATCACGCGCACTTGCACTTCGTCGTTGCCCAGGCCGCCGAGCGAACCCTGCAGCGCTTCCAGAGAACCACGCACATCGGTCTTGAGAACGATGTTGAGGGTTTTCTTCTCTTCCTGACCCATGGTCTCGAAGATGTTTTCCAGCTTGCCGGCGTGAGCACGGGCCAGCTTGACCTCGCGATACTTGCCTTGACGGAACAGGGCAACTTCACGGGCTTTCTTCTCGTCGGCAA > NC_002947/5356667‑5356959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |