| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 60,731 | T→A | 6.5% | intergenic (‑123/‑100) | PP_0051 ← / → PP_0052 | sigma‑54 dependent transcriptional regulator/beta‑lactamase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 60,731 | 0 | T | A | 6.5% | 230.6 / 4.2 | 77 | intergenic (‑123/‑100) | PP_0051/PP_0052 | sigma‑54 dependent transcriptional regulator/beta‑lactamase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (32/40); new base A (3/2); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.91e-01 | |||||||||||
ATGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAGG > NC_002947/60586‑60876 | aTGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACt > 5:69751/1‑149 (MQ=255) agagGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGc < 4:75230/149‑1 (MQ=255) agGATGGGCTTCAGGCATGTCGGGACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCa < 1:209897/149‑1 (MQ=255) agGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCa < 1:352824/149‑1 (MQ=255) agGATGGGCTTCAGGCATGGCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCa < 5:315808/149‑1 (MQ=255) ggATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCag < 6:241463/149‑1 (MQ=255) gATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagt < 5:17338/149‑1 (MQ=255) tGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtga < 4:55428/149‑1 (MQ=255) tGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtga < 3:308475/149‑1 (MQ=255) ggCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagt < 5:150511/149‑1 (MQ=255) ggCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagt < 3:80623/149‑1 (MQ=255) cTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagtg > 1:180886/1‑148 (MQ=255) cTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagtg < 2:180886/148‑1 (MQ=255) cTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTgg > 8:71513/1‑149 (MQ=255) ttCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTgg > 7:48089/1‑148 (MQ=255) tCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCt < 7:284723/148‑1 (MQ=255) ggCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCAGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgc < 4:211606/149‑1 (MQ=255) cACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgcat < 7:71513/149‑1 (MQ=255) ccGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCCGATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgcatg > 1:83912/1‑149 (MQ=255) gTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGgcatgcat > 2:226455/1‑149 (MQ=255) gATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGa < 8:203566/149‑1 (MQ=255) tAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACt > 1:100734/1‑149 (MQ=255) tAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACt < 6:69751/149‑1 (MQ=255) cAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGcc > 4:254274/1‑149 (MQ=255) aaaCACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagt > 3:312398/1‑89 (MQ=255) aaaCACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagt < 4:312398/89‑1 (MQ=255) aaaCACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACt > 8:36896/1‑135 (MQ=255) aaaCACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACt < 7:36896/135‑1 (MQ=255) acTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACt < 5:345992/131‑1 (MQ=255) acTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACt > 6:345992/1‑131 (MQ=255) tGCC‑ATTGGCTGTCAGTTGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcg > 8:15935/1‑149 (MQ=255) cc‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCTTTCTGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcg < 1:125828/147‑1 (MQ=255) cc‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtgagtg > 2:272291/1‑86 (MQ=255) aTTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcggggc > 7:60661/1‑149 (MQ=255) ttGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCag > 3:54614/1‑77 (MQ=38) ttGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCAGTAAAACCGGCCag < 4:54614/77‑1 (MQ=38) ggCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGa > 8:187888/1‑149 (MQ=255) ggCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGa > 3:343828/1‑149 (MQ=255) gCTGTCAGTTGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGATTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGAt < 7:15935/149‑1 (MQ=255) cAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAAt < 6:26880/148‑1 (MQ=255) gTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtga < 4:304266/70‑1 (MQ=255) gTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCagtga > 3:304266/1‑70 (MQ=255) tCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGAt > 4:81790/1‑141 (MQ=255) tCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGAt < 3:81790/141‑1 (MQ=255) tCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGga < 2:100734/149‑1 (MQ=255) tCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGga < 5:8173/149‑1 (MQ=255) cACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGt > 5:272614/1‑101 (MQ=255) cACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGt < 6:272614/101‑1 (MQ=255) aCCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgat < 3:188603/149‑1 (MQ=255) aCCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgat < 4:343828/149‑1 (MQ=255) cTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgatga > 8:243532/1‑149 (MQ=255) cTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACTCCTGTACAAGGCGGGGCGGATATATTGGAGAACGTGATGatcatc < 8:60661/149‑1 (MQ=255) cTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGatcatc < 7:243532/149‑1 (MQ=255) tGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCg > 3:23161/1‑149 (MQ=255) ccAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCgg > 2:362679/1‑148 (MQ=255) ccAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCgg > 4:361411/1‑148 (MQ=255) ccAGTTTTGCCCGCAGCTGTCTCCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAAt > 7:241406/1‑126 (MQ=255) gTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGcaac < 4:23161/149‑1 (MQ=255) ttttGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGTTAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGcaaca < 1:226455/149‑1 (MQ=255) tttGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGcaacaa > 5:354132/1‑149 (MQ=255) tGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcgg > 5:144415/1‑108 (MQ=255) tGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAggcgg < 6:144415/108‑1 (MQ=255) tGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCaacaac < 1:362679/148‑1 (MQ=255) tGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCaacaac < 3:254274/148‑1 (MQ=255) cGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTc < 2:96979/148‑1 (MQ=255) cGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTc > 1:96979/1‑148 (MQ=255) cGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCa < 8:133174/149‑1 (MQ=255) tCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgat < 2:11566/120‑1 (MQ=255) tCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGtgat > 1:11566/1‑120 (MQ=255) tGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTGCAAGTGGACGcc > 6:265007/1‑149 (MQ=255) gCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGGGAACGtg > 6:250981/1‑115 (MQ=255) gCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGGGAACGtg < 5:250981/115‑1 (MQ=255) tcaCTGGCCAGTAAAACCGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCtt > 7:37712/3‑149 (MQ=255) tcaCTGGCCAGTAAAACCGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCtt > 1:290033/3‑149 (MQ=255) cAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGcc < 8:48089/147‑1 (MQ=255) ccGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTacgac > 2:143253/1‑149 (MQ=255) cGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTacgac > 2:201761/1‑148 (MQ=255) ttttACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAgg < 3:361411/149‑1 (MQ=255) | ATGAGAGGATGGGCTTCAGGCATGTCGGCACCGTATGGATGACCGACGCAGGGTAACAAGGACTGCCAAACACTGCC‑ATTGGCTGTCAGTCGACTGCCACCTGGGCTGCCAGTTTTGCCCGCAGCTGTCTGCAACTGGCCGGTTTTACTGGCCAGTGAGTGGCAAAAAGCCTGGCATGCATCTTGATAAAGCTCCTGTCACTGCCTACGCCTGTACAAGGCGGGGCGGATAAATTGGAGAACGTGATGATCATCGGCAACAACCTTCACGTGGACGCCTTCTACGACGAGG > NC_002947/60586‑60876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |