| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,514,659 | A→T | 8.2% | intergenic (+38/+99) | mnaT → / ← cbpM | L‑amino acid N‑acyltransferase/chaperone modulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,514,659 | 0 | A | T | 8.2% | 216.2 / 7.9 | 73 | intergenic (+38/+99) | mnaT/cbpM | L‑amino acid N‑acyltransferase/chaperone modulatory protein |
| Reads supporting (aligned to +/- strand): ref base A (37/30); new base T (4/2); total (41/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.55e-01 | |||||||||||
TGGGCTTCGTGGTGACCGGCCAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGCATGCTGTTCT > NC_002947/5514512‑5514804 | tGGGCTTCGTGGTGACCGGCCAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCa > 3:188644/1‑148 (MQ=255) cTTCGTGGTGACCGGCCAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAagca < 3:207096/149‑1 (MQ=255) cGGACAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAAtt > 3:102820/1‑149 (MQ=255) ggCCAGATACCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATTGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAAttt > 3:336592/1‑149 (MQ=255) cAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGATTTGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGc < 1:298143/149‑1 (MQ=255) cAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGc < 4:188644/149‑1 (MQ=255) tGCCGCCGGTGGGGGTTATGTTTGGCCGCTGGCTTGATCTCACCTACATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTg < 8:359426/149‑1 (MQ=255) ccGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGa < 5:342324/149‑1 (MQ=255) ggTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCaaa < 1:68898/149‑1 (MQ=255) gTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCa > 6:68417/1‑146 (MQ=255) gggggTTACGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGTCAATTTTGCGGTGGAGCAAAGAt < 4:102820/149‑1 (MQ=255) gTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTgg > 3:299749/1‑149 (MQ=255) gTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCg < 3:271673/127‑1 (MQ=255) gTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCg > 4:271673/1‑127 (MQ=255) gTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTg < 4:98631/149‑1 (MQ=255) tttGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGc < 4:299749/149‑1 (MQ=255) gCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCa > 3:243400/1‑149 (MQ=255) gATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTgg < 8:187842/128‑1 (MQ=255) gATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATcgc > 8:141811/1‑149 (MQ=255) gATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATAGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTgg > 7:187842/1‑128 (MQ=255) gACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAag < 4:313432/133‑1 (MQ=255) gACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAag > 3:313432/1‑133 (MQ=255) ccTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACaa < 2:207019/149‑1 (MQ=255) cTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAg > 2:49711/1‑149 (MQ=255) cTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAg < 7:141811/149‑1 (MQ=255) aTGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCg > 2:90475/1‑149 (MQ=255) gCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCt > 4:94260/1‑149 (MQ=255) cTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCca < 4:243400/149‑1 (MQ=255) ggTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCca > 3:180489/1‑147 (MQ=255) gTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCcaca < 5:68417/148‑1 (MQ=255) gCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAt > 7:115457/1‑149 (MQ=255) cTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATg > 8:243910/1‑149 (MQ=255) tGAACCCGGGCGCCGAACCGCCCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGc > 3:331979/1‑149 (MQ=255) aaCCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCg > 1:218718/1‑149 (MQ=255) aaCCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCg > 2:154495/1‑149 (MQ=255) aCCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCgg > 2:313453/1‑149 (MQ=255) cccGGTCGCCTAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGa < 8:361457/122‑1 (MQ=255) cccGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAagcagc > 3:106212/1‑113 (MQ=255) cccGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAagcagc < 4:106212/113‑1 (MQ=255) cccGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGc > 5:314311/1‑149 (MQ=255) cccGGGCGCCGAACCGACCTGAAATGAGGTCCATCGTGTGAGCATCGAGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGa > 7:361457/1‑122 (MQ=255) ccGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGTGGCTGCAAAGCAGCCCATcgc < 4:95584/119‑1 (MQ=255) ccGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATcgc > 3:95584/1‑119 (MQ=255) gcgcCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCAcggc > 4:340951/1‑149 (MQ=255) cGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCCGTCGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCAcggccg > 1:298932/1‑149 (MQ=255) cGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATc < 5:252874/109‑1 (MQ=255) cGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATc > 6:252874/1‑109 (MQ=255) gAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACggccggcc < 4:180489/149‑1 (MQ=255) aaCCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACggccggcc > 3:231082/1‑148 (MQ=255) ccGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAt > 8:243407/1‑130 (MQ=255) ccGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGAt < 7:243407/130‑1 (MQ=255) ccGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTAc < 1:313453/149‑1 (MQ=255) ccGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTAc < 2:218718/149‑1 (MQ=255) cGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTAc > 8:251641/1‑148 (MQ=255) aTGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCTGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATa > 8:342612/1‑148 (MQ=255) aTGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATaa < 1:90475/149‑1 (MQ=255) ggTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCg > 1:216833/1‑149 (MQ=255) cATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGcc > 2:317063/1‑148 (MQ=255) aTCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCa < 4:231082/149‑1 (MQ=255) gtgtGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGc < 1:317063/148‑1 (MQ=255) tgAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCgct > 2:252840/1‑149 (MQ=255) gAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCgctg > 7:221951/1‑149 (MQ=255) gCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCgctgct > 4:23643/1‑149 (MQ=255) gcgAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGTACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGc < 7:243910/149‑1 (MQ=255) gcgAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGc < 4:336592/149‑1 (MQ=255) gccggggCTGCTTTGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACt > 3:304278/5‑118 (MQ=38) gccggggCTGCTTTGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACt < 4:304278/114‑1 (MQ=38) gccggggCTGCTTTGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACt < 4:309423/114‑1 (MQ=38) gccggggCTGCTTTGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACt > 3:309423/5‑118 (MQ=38) gccggggCTGCTTTGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGCAt > 2:356536/5‑149 (MQ=255) gccggggCTGCTTTGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGCAt > 2:310288/5‑149 (MQ=255) aaaGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGCATg < 6:314311/149‑1 (MQ=255) gCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGCATGCTGt > 7:138839/1‑148 (MQ=255) tGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCAAGCCGCTGCTTCAGCATGCTGTtct > 4:283326/1‑149 (MQ=255) | TGGGCTTCGTGGTGACCGGCCAGATGCCGCAGGTGGGGGTTAAGTTTGGCCGCTGGCTTGATCTGACCTTCATGCAACTGGTGCTGAACCCGGGCGCCGAACCGACCTGAAATGCGGTCCATCGTGTGAGCATCGCGAAAGGGCTGCAAAGCAGCCC‑‑CGGCAATTTTGCGGTGGAGCAAAGATCTGGGGCTGCAAAGCAGCCCATCGCGACACAAGGCCGCTCCCACAGATGCCGGCACGGCCGGCCTACAACTGGATAAACCGGCCCAGCCGCTGCTTCAGCATGCTGTTCT > NC_002947/5514512‑5514804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |