| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,518,736 | T→A | 10.4% | K59* (AAA→TAA) ‡ | PP_4851 ← | phosphate starvation‑inducible protein PsiF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,518,736 | 0 | T | A | 10.4% | 183.0 / 9.5 | 67 | K59* (AAA→TAA) ‡ | PP_4851 | phosphate starvation‑inducible protein PsiF |
| Reads supporting (aligned to +/- strand): ref base T (32/28); new base A (3/4); total (35/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.43e-01 | |||||||||||
TCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCA > NC_002947/5518590‑5518876 | tCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTACATATTTTCTAGCTGCGATTGTGTCACATCCTATTAAAGGCAGGTCATAATCAACGCTTTGc > 8:349096/1‑149 (MQ=255) aTTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑CTTGGT‑GGTGGCGTCAGCATTGCAGGTCTACATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGt < 2:224757/149‑1 (MQ=255) tttCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGt < 1:324949/148‑1 (MQ=255) tcttcttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCa > 4:2540/1‑149 (MQ=255) ttcttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATc > 3:18744/1‑149 (MQ=255) attctaGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCg < 7:166798/144‑1 (MQ=255) cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTTTGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATAAACGCAAAGCGTTCAtga < 1:126965/148‑3 (MQ=255) cttcAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAtga < 5:357076/148‑3 (MQ=255) ggCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTg < 4:18744/149‑1 (MQ=255) ggCAATAGCTAATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGGATTGCAGGTCTTCATTTTTTATTGCTGGGTTTGGGGCGCATCGTTTTTAAGGCAGGTGCTCATGAACGCTTTGCGTtcgtcg > 8:166798/1‑143 (MQ=255) cAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTGTTCATTTTTTCTTGCGGGGTTTGGGGGCCATCCTTTTGGAGGCAGGTGCTCATGAAAGCTTTGCGTTCGTCGCCCTTgcg > 7:363534/1‑147 (MQ=255) cAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAg < 4:120465/149‑1 (MQ=255) gCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGAGTTCATCGCCCTTGAGGGCCt > 3:252333/1‑149 (MQ=255) cTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCtt > 3:77005/1‑149 (MQ=255) cTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCtt < 4:77005/149‑1 (MQ=255) tCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGCTTTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGGGTTCATCGCACTTGAGGGGCtt > 1:68482/1‑149 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCa > 5:93422/1‑127 (MQ=255) gAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCa < 6:93422/127‑1 (MQ=255) cTCATCCCCCTTCAGGGC‑TTTGGTGGGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAtga > 1:196655/1‑117 (MQ=255) cTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCAAAGCGTTCAtga < 2:196655/118‑3 (MQ=255) cATCCCCCTTCCGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTGTGCTTGCTGTGTTTGCGGCACATCCTTATTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTg < 6:75545/149‑1 (MQ=255) aTCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTg > 5:129538/1‑148 (MQ=255) ccccTTCAGGGC‑TTTGGT‑GGTTGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAg < 1:372295/148‑1 (MQ=255) ccccTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGTGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAg < 4:369332/148‑1 (MQ=255) cccTTCAGGGA‑GTTGGT‑GGTGGCGGCAGCATTGCAGTTCTTCATTTTTTCTTGCTGGGGTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGt < 1:243685/149‑1 (MQ=255) cAGGGC‑TTTGTT‑GGTGGCCGCAGCATGGCAGCTCTTCATTTTTTCTTGCTCCGTTTGGGGCACATCCTTTTTCAGCCTGGTTCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCa < 2:68482/149‑1 (MQ=255) tggttccGTCAGCATTGCAGGTCTTCATTTTTTCTTTCAGGGTTTGGGTCACCTACTTTATCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCctg < 4:252333/142‑1 (MQ=255) aTTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTgg < 7:135630/149‑1 (MQ=255) cTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAAc > 8:301063/1‑149 (MQ=255) ttCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAAcc > 2:46944/1‑149 (MQ=255) aTTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGc > 6:310112/1‑103 (MQ=255) ttttttCTTGCGTGGTTTGGGTCACTTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGGGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTgg < 7:349096/149‑1 (MQ=255) cTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACt < 3:2540/148‑1 (MQ=255) ttGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCATTTCCTGCTGCGCGGTATTGTCAGCGAAACCTTTGGCACTg > 3:202698/1‑148 (MQ=255) ggcttggcttgTGGCCCATCCTTTTTCATGCAGGAGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGaa < 8:363534/148‑1 (MQ=255) gggCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgc > 2:194683/1‑147 (MQ=255) cacaTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGcc < 6:188281/58‑1 (MQ=255) cacaTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGcc > 5:188281/1‑58 (MQ=255) acaTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc > 7:86748/1‑149 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGcc > 1:149377/1‑55 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGcc < 2:149377/55‑1 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgcca < 6:129538/149‑1 (MQ=255) aTCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgc > 1:83637/1‑147 (MQ=255) tCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag > 2:163171/1‑149 (MQ=255) ccTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagcgccag > 7:73860/1‑148 (MQ=255) ctatttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTAATCTTTTCCTGCTCCGCGGTATTGGCACCGAAAACATGGGCAAGTAAAAACACCGCCACCGCCAGt > 2:377129/4‑148 (MQ=255) ttCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGAAGCGAAACCTTGGGCACTGAACAACACCGCCCGCGCCAGTAACgg > 3:212251/1‑149 (MQ=255) caggcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGa > 4:144577/1‑149 (MQ=255) ggcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGAtt < 2:83637/149‑1 (MQ=255) gcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACggg > 8:60712/1‑145 (MQ=255) gcaggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACggg < 7:60712/145‑1 (MQ=255) aggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTgc < 8:86748/149‑1 (MQ=255) ggggCTCATGAACTCCTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTgca < 7:334595/146‑1 (MQ=255) ggTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTgca < 3:144577/149‑1 (MQ=255) gCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTAt > 5:268180/1‑89 (MQ=255) gCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTAt < 6:268180/89‑1 (MQ=255) tCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACt > 3:83964/1‑149 (MQ=255) gaTGAACGCAAAGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTTGCAGCGACACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACtt > 1:290838/2‑149 (MQ=255) gaTGAACGCAAAGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGa > 5:180095/2‑137 (MQ=255) gaTGAACGCAAAGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGa < 6:180095/136‑1 (MQ=255) cATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACtt > 5:79477/1‑149 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACttt > 4:46042/1‑149 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACttt > 8:197158/1‑149 (MQ=255) aTGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACttt > 6:98726/1‑149 (MQ=255) gAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACt < 5:163893/145‑1 (MQ=255) gAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACt > 6:163893/1‑145 (MQ=255) aaCGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCa < 7:301063/148‑1 (MQ=255) tttGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagc < 6:92391/115‑1 (MQ=255) tttGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACcgccagc > 5:92391/1‑115 (MQ=255) | TCATTTCTTCTTCAGGCAATCGCTCATGAAGGCCTTGCGCTCATCCCCCTTCAGGGC‑TTTGGT‑GGTGGCGTCAGCATTGCAGGTCTTCATTTTTTCTTGCTGGGTTTGGGGCACATCCTTTTTCAGGCAGGTGCTCATGAACGCTTTGCGTTCATCGCCCTTGAGGGCCTTGGCGGTGGCGTCGGCGTTGCAGGTTTTCATCTTTTCCTGCTGCGCGGTATTGGCAGCGAAACCTTGGGCACTGAACAACACCGCCAGCGCCAGTAACGGGATTTGCAGCACTTTCA > NC_002947/5518590‑5518876 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |