| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,557,922 | T→G | 6.5% | intergenic (‑293/+38) | PP_4888 ← / ← purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,557,922 | 0 | T | G | 6.5% | 223.2 / 6.6 | 77 | intergenic (‑293/+38) | PP_4888/purA | methyl‑accepting chemotaxis transducer/adenylosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (34/38); new base G (3/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.31e-01 | |||||||||||
CCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGC > NC_002947/5557774‑5558068 | ccGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCtt > 7:359491/1‑149 (MQ=255) gCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTtct < 1:260334/149‑1 (MQ=255) cTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTtctc < 3:103956/149‑1 (MQ=255) cTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAgg > 5:343786/1‑149 (MQ=255) cTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAg < 2:133365/148‑1 (MQ=255) aCAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGc > 1:267380/1‑149 (MQ=255) cggccggcGCCCAACCATCGTTGGGTGCCCACTTCGCCGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCcgcg < 4:211717/149‑1 (MQ=38) ccTGCGCCCAACCATCGTTGGGGCCCCACTTAGTAGGGGGTTTACCCGGGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCgcggcg < 7:165260/149‑1 (MQ=38) cTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTGTCAGGGCCgcggcg > 6:71492/1‑148 (MQ=255) tGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGt > 5:167159/1‑148 (MQ=255) tGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTGAGAAGGGCcgcg > 1:270757/1‑144 (MQ=255) tGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTGAGAAGGGCcgcg < 2:270757/144‑1 (MQ=255) cgcCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAg < 2:267380/149‑1 (MQ=255) cccAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCGGCGGCGTCAGAt < 6:167159/149‑1 (MQ=255) aaCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAg > 1:277907/1‑149 (MQ=255) aCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATc > 5:203016/1‑146 (MQ=255) aCCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATc < 6:203016/146‑1 (MQ=255) cATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCt > 4:182280/1‑149 (MQ=255) aTCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGACAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTg > 1:98140/1‑149 (MQ=255) ttGTGTGCCCAATTAGTTGGGGGTTTACCCGCGAATACGGTAGCGGCGGCAAGGGTGGATTACGGGTGGATATTGGCCAGCACATACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGaa < 6:343786/148‑1 (MQ=38) tgtgCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAgg > 5:184559/1‑147 (MQ=255) tgtcCCCCCATAGGAGCGTGTTTACCCGCCAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGc < 6:360785/148‑1 (MQ=255) gCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCGTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCCGAt > 5:32559/1‑149 (MQ=255) cacaTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAACATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCa < 1:298509/149‑1 (MQ=255) cacaTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAg < 6:184559/149‑1 (MQ=255) acaTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAgg > 4:92232/1‑140 (MQ=255) acaTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAgg < 3:92232/140‑1 (MQ=255) acaTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAgg > 5:370155/1‑149 (MQ=255) acaTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAgg < 1:7809/149‑1 (MQ=255) aTAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCCGATCAGCCTGGAAGGCAGATCAGGCg > 2:292608/1‑149 (MQ=255) ggAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAAc < 6:362786/149‑1 (MQ=255) gAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACg < 7:440/149‑1 (MQ=255) gAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTGAGAAGGGCCGCGGCGtt > 6:342294/1‑117 (MQ=37) gAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTGAGAAGGGCCGCGGCGtt < 5:342294/118‑2 (MQ=37) cgCGGGTAAACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACgg > 8:148123/2‑149 (MQ=255) aGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACgg < 3:182280/149‑1 (MQ=255) cGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGaa < 5:131739/129‑1 (MQ=255) cGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGaa > 6:131739/1‑129 (MQ=255) gTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGAc > 2:38674/1‑149 (MQ=255) tACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACgc < 5:217733/148‑1 (MQ=255) cccGCTAATACGTTAGCGGCGGAAACGGTGTATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACgcag < 8:359491/148‑1 (MQ=255) aattgggTAGCGGCGGCAAGGGTGTTTTAGGGGTGTATATTGGCCAGCACACACATGCCAACAA‑TTCAAACCGCCGGGGCCCTTCTCAGGGCGGCGGCGTCAGATCAGCGTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGAt < 6:35644/143‑1 (MQ=255) cGGTAGCGGCGGCAACGGTGGATTACCGGTGGATTTTGCCCAGCACAGACATCCCCACAA‑ATGAAACCGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGtct < 7:328598/149‑1 (MQ=255) cGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGtc < 6:368577/148‑1 (MQ=255) ggTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACgcagc < 2:4295/138‑1 (MQ=255) ggTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACgcagc > 1:4295/1‑138 (MQ=255) cggcAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGt > 4:123494/1‑149 (MQ=255) cAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCa < 7:30346/103‑1 (MQ=255) cAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTATCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCa > 8:30346/1‑103 (MQ=255) aTTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCg < 1:38674/149‑1 (MQ=255) ccGGTGGATATTGGCCAGCACAGCCTTGCCCAAAA‑ATGAAACCGCCGCGGCCCTTCTCTGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGaaa < 6:32559/148‑1 (MQ=255) cGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGcc > 8:147477/1‑139 (MQ=255) cGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGcc < 7:147477/139‑1 (MQ=255) cGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAat > 7:61208/1‑148 (MQ=255) cGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAat > 6:226786/1‑148 (MQ=255) gTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAatga > 2:309355/1‑148 (MQ=255) gTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAatga < 1:309355/148‑1 (MQ=255) gATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCGCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGt < 6:370155/148‑1 (MQ=255) catatTGGCCAGCACAGACATGCCCACAA‑AGGAAAACGCCGCGGCCGTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTGGCGGTCCGGGCCGGTCGAAATGATGt < 1:203533/147‑1 (MQ=255) ttGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGATCGACATCATTTCGac < 2:277907/148‑2 (MQ=255) ccAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGa > 4:313101/1‑104 (MQ=255) ccAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGa < 3:313101/104‑1 (MQ=255) cAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGgcgc > 5:177808/1‑149 (MQ=255) cccACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGTCGGTCGAAATGATGt < 6:313310/126‑1 (MQ=255) cccACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGTCGGTCGAAATGATGt > 5:313310/1‑126 (MQ=255) cccACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGctct > 4:275871/1‑149 (MQ=255) cccACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGctct > 4:119240/1‑149 (MQ=255) acaA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAAAGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACAAGCTCTTc > 4:325243/1‑148 (MQ=255) aa‑aTGAAAACGCCGCGGCCCGTCTCACGGCCGCGGCGTCAGATAACCCAGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGAt > 4:53513/1‑149 (MQ=255) aa‑aTCAAAACGCCGCGGCCCTTCTCCGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGAt < 7:238209/149‑1 (MQ=255) a‑aTGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATg < 3:119240/149‑1 (MQ=255) aaaaCGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCt > 1:212326/1‑149 (MQ=255) ccgccgcGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGa < 4:179918/148‑1 (MQ=255) aCGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGa > 4:250924/1‑149 (MQ=255) cgcgGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTa < 5:226786/149‑1 (MQ=255) cgcgGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTa < 1:292608/149‑1 (MQ=255) cgcgGCCCTGAGAAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTa > 3:90773/1‑149 (MQ=255) cTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGaa < 6:321660/95‑1 (MQ=255) cTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGaa > 5:321660/1‑95 (MQ=255) cTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCAcgc > 8:44516/1‑149 (MQ=255) | CCGCTCCTACAACGGCCTGCGCCCAACCATCGTTGTGTGCCCACATAGGAGCGGGTTTACCCGCGAATACGGTAGCGGCGGCAACGGTGGATTACCGGTGGATATTGGCCAGCACAGACATGCCCACAA‑ATGAAAACGCCGCGGCCCTTCTCAGGGCCGCGGCGTCAGATCAGCCTGGAAGGCAGATCAGGCGAACGGGTGACGCAGCACGATGGTCTCGTTGCGGTCCGGGCCGGTCGAAATGATGTCGATCGGCGCGCCAACCAGCTCTTCGATGCGCTTGATGTAGTCACGC > NC_002947/5557774‑5558068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |