| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,641,186 | C→G | 7.7% | G283G (GGC→GGG) ‡ | PP_4951 → | EmrB/QacA family drug resistance transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,641,186 | 0 | C | G | 7.7% | 235.4 / 7.4 | 75 | G283G (GGC→GGG) ‡ | PP_4951 | EmrB/QacA family drug resistance transporter |
| Reads supporting (aligned to +/- strand): ref base C (35/34); new base G (2/4); total (37/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCTGTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATCGCA > NC_002947/5641041‑5641334 | tgctgTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGgcgcg > 1:279633/1‑149 (MQ=255) gTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAgcggc < 3:47325/142‑1 (MQ=255) gTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAgcggc > 4:47325/1‑142 (MQ=255) gTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAgcggc > 4:52223/1‑142 (MQ=255) gTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGc > 3:9372/1‑149 (MQ=255) tCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGccc > 7:293804/1‑148 (MQ=255) gCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGcccag < 3:259834/149‑4 (MQ=255) gCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGccca < 3:61982/148‑3 (MQ=255) ccGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTc < 2:284464/149‑1 (MQ=255) ggCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCt > 2:41716/1‑149 (MQ=255) gCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTg < 8:178779/149‑1 (MQ=255) gCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGCGCCGCTGcccaggcgg < 8:293804/149‑8 (MQ=255) cATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCt > 3:265008/1‑147 (MQ=255) cATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCt < 4:265008/147‑1 (MQ=255) aTGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGt < 8:81290/149‑1 (MQ=255) ctgcctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCAt > 4:154297/1‑149 (MQ=255) gcctgGCCGCGTACTGGCTGCGCGCCGGGCTCGACCCGGAGCCGCTGTGATCGCCAAGCCTGTTCCGGGTGCGTACTTTCGCCATCGGCATCCTCGGCTACCTGTTCGCCCGCGTGGGCAGCGgcgcgc < 7:85353/129‑1 (MQ=255) gcctgCCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTCTTCACGCCAAGCCTGTTCCGCGTGCGTACTTTCGCAATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGTCAGCCgcgcgc > 8:85353/1‑129 (MQ=255) cctgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtg < 7:352380/148‑1 (MQ=255) tgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTg > 2:262348/1‑137 (MQ=255) tgGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTg < 1:262348/137‑1 (MQ=255) gcgTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctgctgc > 4:171669/1‑148 (MQ=255) gcgTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtgctgctgc < 3:171669/148‑1 (MQ=255) cgTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAg < 3:176336/149‑1 (MQ=255) cgcgcCGGGCGCGACCCGGAGCCGCTGGTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTggg < 5:262617/149‑1 (MQ=255) gcgcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGc > 4:138799/1‑149 (MQ=255) cgcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTTGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGc > 8:245132/1‑148 (MQ=255) cgcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTg < 7:22715/145‑1 (MQ=255) cgcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTg > 8:22715/1‑145 (MQ=255) gcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGc < 6:298385/121‑1 (MQ=255) gcCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGc > 5:298385/1‑121 (MQ=255) gcCGGGCGCGACCCGGACCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCAATAGGCATCCTCGGCAACCTGTTCGCCAGCCTGGGCAGCGGCGCGCTCCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTa > 2:25829/1‑149 (MQ=255) ccGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTg < 2:43154/107‑1 (MQ=255) ccGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTg > 1:43154/1‑107 (MQ=255) ccGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTAc < 3:154297/149‑1 (MQ=255) ggCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCa > 6:88104/1‑149 (MQ=255) gcgcGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGAGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCAc > 7:235908/1‑149 (MQ=255) cgACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCAtt > 8:230483/1‑117 (MQ=255) cgACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCAtt < 7:230483/117‑1 (MQ=255) aCCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGcc > 6:224405/1‑149 (MQ=255) cccGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTcc > 1:106946/1‑104 (MQ=255) cccGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTcc < 2:106946/104‑1 (MQ=255) cGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGt < 2:372970/106‑1 (MQ=255) cGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGt > 1:372970/1‑106 (MQ=255) cGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTg < 8:341368/131‑1 (MQ=255) cGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTg > 7:341368/1‑131 (MQ=255) ttCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTTGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGgcatg < 7:245132/147‑1 (MQ=255) ttCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGgcatgag > 4:334467/1‑149 (MQ=255) ttCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGgcatga < 1:41716/148‑1 (MQ=255) ttCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGgcatga < 1:379382/148‑1 (MQ=255) ttCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGgcatga < 8:235908/148‑1 (MQ=255) ttCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGgcatg < 2:279633/147‑1 (MQ=255) tcGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTggg < 7:244058/119‑1 (MQ=255) tcGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTggg > 8:244058/1‑119 (MQ=255) tcAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGAt < 7:151746/148‑1 (MQ=255) tGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTg > 1:160828/1‑149 (MQ=255) ttCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTggc > 8:142741/1‑149 (MQ=255) ccGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTggcg < 5:88104/148‑1 (MQ=255) gcgtgcgtACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAgg > 6:98422/1‑120 (MQ=255) gcgtACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtg > 5:332292/1‑79 (MQ=255) gcgtACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATtg < 6:332292/79‑1 (MQ=255) gCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGc < 2:160828/149‑1 (MQ=255) tCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCaaa < 7:142741/149‑1 (MQ=255) gCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACGCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATc > 7:200798/1‑148 (MQ=255) cATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCa > 6:234583/1‑149 (MQ=255) tCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCAtt < 5:234583/149‑1 (MQ=255) tCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCAtt < 8:200798/149‑1 (MQ=255) ccTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTg > 8:302638/1‑149 (MQ=255) cTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGc > 3:23517/1‑149 (MQ=255) tCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGc > 7:72474/1‑94 (MQ=255) tCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGc < 8:72474/94‑1 (MQ=255) aaCCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGagc > 1:134891/1‑147 (MQ=255) ttCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCg > 6:302681/1‑102 (MQ=255) ttCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCg < 5:302681/102‑1 (MQ=255) ccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGa > 6:3835/1‑143 (MQ=255) ccgccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGa < 5:3835/143‑1 (MQ=255) gccTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACgg > 4:259425/1‑149 (MQ=255) tGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTc > 8:86625/1‑149 (MQ=255) cggCAGCGCGCCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTg > 2:341915/2‑112 (MQ=255) cggCAGCGCGCCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTg < 1:341915/111‑1 (MQ=255) ggCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCgg < 3:334467/149‑1 (MQ=255) gcggcgCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTAt < 3:259425/149‑1 (MQ=255) cgcgcTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATCGca < 2:134891/149‑1 (MQ=255) | TGCTGTTCGCCGGCATGGCCTGCCTGGCCGCGTACTGGCTGCGCGCCGGGCGCGACCCGGAGCCGCTGTTCTCGCCAAGCCTGTTCCGCGTGCGTACTTTCGCCATCGGCATCCTCGGCAACCTGTTCGCCCGCCTGGGCAGCGGCGCGCTGCCGTTCCTGGTGCCATTGCTGCTGCAGGTTGCGCTGGGCTACTCACCCGCCCAGGCCGGCATGAGCATGATCCCGCTGGCGGCGGCGGCCATGCTGGCCAAATCCATTGCCCGACCGCTGATCGAACGGTTCGGCTATCGCA > NC_002947/5641041‑5641334 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |