| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,645,311 | C→T | 6.5% | L222L (CTG→TTG) ‡ | PP_4954 → | membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,645,311 | 0 | C | T | 6.5% | 230.8 / 3.6 | 77 | L222L (CTG→TTG) ‡ | PP_4954 | membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (34/38); new base T (3/2); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGGTACAGCAGAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAACGCACTGACCGA > NC_002947/5645164‑5645459 | ccGGTACAGCAGAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCt < 4:359891/149‑1 (MQ=255) ggTACAGCAGAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGa < 6:211911/149‑1 (MQ=255) gcagAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAg > 6:235824/1‑149 (MQ=255) cagAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGc > 1:15698/1‑149 (MQ=255) agagCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGc > 3:89293/1‑148 (MQ=255) gACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGat‑catc < 1:368755/149‑1 (MQ=255) cGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCggg > 4:24917/1‑149 (MQ=255) aGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCTAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTg < 2:231393/149‑1 (MQ=255) ggCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGCT‑CATCCTGCACCGGGTGGGCaa > 7:228837/1‑149 (MQ=255) ggCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGc < 1:42501/147‑1 (MQ=255) gCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTgg > 8:297353/1‑144 (MQ=255) gCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTgg < 7:297353/144‑1 (MQ=255) aGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAg < 3:24917/149‑1 (MQ=255) ccTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGccaa > 7:182973/1‑148 (MQ=255) ccTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGccaa < 8:182973/148‑1 (MQ=255) gAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTgg < 4:226748/134‑1 (MQ=255) gAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTgg > 3:226748/1‑134 (MQ=255) gCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACt > 5:91198/1‑149 (MQ=255) tCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTc > 1:260435/1‑148 (MQ=255) ggCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAAc > 2:318095/1‑130 (MQ=255) ggCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAAc < 1:318095/130‑1 (MQ=255) ggCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGGAgg > 3:116677/1‑149 (MQ=255) cAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAg > 2:174604/1‑95 (MQ=255) cAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAg < 1:174604/95‑1 (MQ=255) cAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGGAGGTaa < 4:116677/149‑1 (MQ=255) cAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGt > 3:107633/1‑147 (MQ=255) cAGCCTGTTTGAACCGGGCCGCAAGCTCGACGTCGAGGCACTGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAATGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTaa < 5:256106/149‑1 (MQ=255) gCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGc < 6:91198/149‑1 (MQ=255) ccTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGcc < 4:169908/149‑1 (MQ=255) ccTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGcc < 2:260435/149‑1 (MQ=255) tttGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTa > 3:216163/1‑149 (MQ=255) ttGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTAc > 7:198562/1‑149 (MQ=255) tGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTa > 3:78791/1‑147 (MQ=255) tGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTa < 4:78791/147‑1 (MQ=255) tGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑AATCCTGCACAGGGTGCGCAACAGCCCACCAAACTCGAAGGTAAGCCGCTAc > 2:363851/1‑148 (MQ=255) gAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTAcc < 5:235824/148‑1 (MQ=255) cGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAg > 2:232227/1‑149 (MQ=255) cGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAg < 4:216163/149‑1 (MQ=255) cGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGt < 1:379564/148‑1 (MQ=255) tCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGt > 6:332020/1‑94 (MQ=255) tCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGt < 5:332020/94‑1 (MQ=255) tCGAGGCACGGCGCCTGGAACTGGCCCAGCATAACGGCAAGGTGGTGCCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTTGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAg < 8:261315/149‑1 (MQ=255) cGAGGCACTGCGCCTGTAACTTGCCCAGCAGAACGGCAAGGTGGTGTCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAg < 8:266410/148‑1 (MQ=255) gAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAg > 5:167623/1‑95 (MQ=255) gAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAgg < 3:167595/148‑1 (MQ=255) gAGGCACGGCGACTGGAACTGGCCCAGCAGAACTGCAAGGTGGTGGACGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAg < 6:167623/95‑1 (MQ=255) aGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGat < 2:15698/149‑1 (MQ=255) aCGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATcc < 1:38201/149‑1 (MQ=255) aCGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATc > 3:93842/1‑148 (MQ=255) gcCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAg > 3:65129/1‑149 (MQ=255) ggAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAg < 1:220502/115‑1 (MQ=255) gAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCgt < 4:93842/147‑1 (MQ=255) gAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCgt < 3:137150/147‑1 (MQ=255) gCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAATGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTg < 1:363851/148‑1 (MQ=255) ccAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGc < 6:7573/137‑1 (MQ=255) ccAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGc > 5:7573/1‑137 (MQ=255) ccAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCt > 2:312623/1‑149 (MQ=255) agcagAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCg > 2:333596/1‑149 (MQ=255) cagAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCa < 4:107633/149‑1 (MQ=255) agAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCAc > 5:284525/1‑149 (MQ=255) ggCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTAccc < 8:228837/149‑1 (MQ=255) cAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGc > 3:155740/1‑125 (MQ=255) cAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGc < 4:155740/125‑1 (MQ=255) cAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTAcccc > 4:253779/1‑148 (MQ=255) gtggtgGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACaa > 5:256054/1‑149 (MQ=255) tggtggCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAAc < 8:198562/149‑1 (MQ=255) ccttggCTGCGTTCAGCGCGGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAAc > 1:39673/4‑149 (MQ=255) ttggCTGCGTTCAGCGCGGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTAccc > 7:99996/2‑140 (MQ=255) ttggCTGCGTTCAGCGCGGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTAccc < 8:99996/139‑1 (MQ=255) ttggCTGCGTTCAGCGCGGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAAc > 7:54876/2‑147 (MQ=255) ttggCTGCGTTCAGCGCGGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTCTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAAc < 8:54876/146‑1 (MQ=255) gtggCCGCGCTGAACGCAGCCAAGGAGATGCATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAACg > 1:28958/1‑149 (MQ=255) gtggCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTAc < 2:81777/138‑1 (MQ=255) gtggCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTAc > 1:81777/1‑138 (MQ=255) cgcgCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCa > 6:104679/1‑108 (MQ=255) cgcgCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCa < 5:104679/108‑1 (MQ=255) cgcgCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAACGCACTGa > 8:253375/1‑149 (MQ=255) cTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAACGCACTGACCGa < 1:333596/149‑1 (MQ=255) | CCGGTACAGCAGAGCCTGGCCAGACTGTTCTTCGAGCTGGGCAGCTACCTGAAGCTCAAGGCCAGCCTGTTTGAACCGGTCCGCACGCTCGACGTCGAGGCACGGCGCCTGGAACTGGCCCAGCAGAACGGCAAGGTGGTGGCCGCGCTGAACGCAGCCAAGGAGAT‑CATCCTGCACCGGGTGGGCAACAGCCAACCAAACTCGAAGGTAAGCCGCTACCTCAAGCTGTACTTCCTGGCCCAGGATATCCACGAGCGTGTCAGTGCCTCGCACTACCCCTACAACGCACTGACCGA > NC_002947/5645164‑5645459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |