Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,777,402 C→G 8.3% intergenic (+21/+22) betA‑II → / ← PP_5065 choline dehydrogenase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,777,4020CG 8.3% 180.7 / 5.9 60intergenic (+21/+22)betA‑II/PP_5065choline dehydrogenase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (28/26);  new base G (2/3);  total (31/29)
Fisher's exact test for biased strand distribution p-value = 6.71e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01

GATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCT  >  NC_002947/5777255‑5777544
                                                                                                                                                    |                                                                                                                                              
gATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCa                                                                                                                                               <  7:209864/149‑1 (MQ=255)
      cGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGcc                                                                                                                                         >  4:206507/1‑149 (MQ=255)
       gagaAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCgcgc                                                                                                                                                <  3:250367/141‑1 (MQ=255)
       gagaAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCgcgc                                                                                                                                                >  4:250367/1‑141 (MQ=255)
        agaagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACTGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGcccc                                                                                                                                       <  1:257782/149‑1 (MQ=255)
          aagaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCTGCGCGGCCCCtg                                                                                                                                     <  1:217716/149‑2 (MQ=255)
            gaTTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCttt                                                                                                                                    >  3:204071/1‑148 (MQ=255)
               ttCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCAc                                                                                                                                 <  6:248361/148‑1 (MQ=255)
                 cGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTc                                                                                                                                   <  7:13509/144‑1 (MQ=255)
                 cGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTc                                                                                                                                   >  8:13509/1‑144 (MQ=255)
                      aaGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCt                                                                                                                          >  5:219473/1‑148 (MQ=255)
                        gATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGGGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAg                                                                                                                       >  6:335322/1‑149 (MQ=255)
                           ccGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAACGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTGGGTCAGGGGCCGCGAAGCGGCCCCGTTCACGTTTGCTCAgggg                                                                                                                    >  8:358346/1‑147 (MQ=255)
                           ccGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACg                                                                                                                                <  1:346832/137‑1 (MQ=255)
                           ccGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACg                                                                                                                                >  2:346832/1‑137 (MQ=255)
                                 tCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAgc                                                                                                              >  1:138200/1‑149 (MQ=255)
                                  cGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAgcg                                                                                                             >  3:163979/1‑149 (MQ=255)
                                  cGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAgcg                                                                                                             <  1:296414/149‑1 (MQ=255)
                                     aaGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCa                                                                                                           >  5:61346/1‑148 (MQ=255)
                                     aaGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCa                                                                                                           >  6:239955/1‑148 (MQ=255)
                                              ccGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGTCGATGCGTGAAGCGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATTTgc                                                                                                 <  3:249381/149‑1 (MQ=255)
                                              ccGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAAtgtg                                                                                                  <  6:38203/148‑1 (MQ=255)
                                              ccGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAAtgt                                                                                                   <  4:163979/147‑1 (MQ=255)
                                              ccGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTgc                                                                                                 <  3:206507/149‑1 (MQ=255)
                                              ccGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTgc                                                                                                 >  1:378728/1‑149 (MQ=255)
                                                 cgcAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCa                                                                                              <  1:168383/149‑1 (MQ=255)
                                                    tcccccGCCACGTAGTACTTGGCGGGGGATGCACCAGTGAAAGGCAAACCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATc                                                                                            >  1:275635/5‑148 (MQ=255)
                                                     gcaCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCaa                                                                                          <  4:200112/149‑1 (MQ=255)
                                                      caCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACGAGGGCTGAGGCATTGATAAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGGTAAGGCGGCCAGCGCAAAAAATGTGCGAAACaa                                                                                          >  1:302929/1‑149 (MQ=255)
                                                      caCCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAAc                                                                                         <  4:204071/149‑1 (MQ=255)
                                                        ccGCCACGTAGTACTTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACg                                                                                        >  3:252406/1‑148 (MQ=255)
                                                            cAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGtt                                                                                                                              >  8:278601/1‑106 (MQ=255)
                                                            cAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGtt                                                                                                                              <  7:278601/106‑1 (MQ=255)
                                                              aGTACTACGTTGCGGTGGATGCACCAGTGAAAGTCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAatcatc                                                                                 <  7:213570/149‑1 (MQ=255)
                                                                  ctacGGGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTc                                                                              <  6:287681/148‑1 (MQ=255)
                                                                   tacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAAtgt                                                                                                   >  4:169912/1‑126 (MQ=255)
                                                                   tacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAAtgt                                                                                                   <  3:169912/126‑1 (MQ=255)
                                                                   tacGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGTGCATCAACGAATCATCCTCGa                                                                            >  5:158302/1‑149 (MQ=255)
                                                                           gggggATGCCCCAGTGAAAGGCAAGCCGAGGCGGGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCGGTCACGTGTGCGCAGGCGGGCAGCGCACACAATGTGCGCAGCACCGCAGCATCATCGCCCCCCAGt                                                                    >  2:95292/1‑149 (MQ=255)
                                                                           gggggATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTc                                                                              >  8:346691/1‑139 (MQ=255)
                                                                           gggggATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTc                                                                              <  7:346691/139‑1 (MQ=255)
                                                                            ggggATGCACCAGCGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTc                                                                   <  5:335322/149‑1 (MQ=255)
                                                                                         tGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAgcgc                                                      <  4:252406/149‑1 (MQ=255)
                                                                                               gCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGc                                                 >  2:327381/1‑148 (MQ=255)
                                                                                               gCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGc                                                 >  3:55115/1‑148 (MQ=255)
                                                                                                 aaGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGAt                                              <  2:378728/149‑1 (MQ=255)
                                                                                                  aGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATc                                             <  5:239955/149‑1 (MQ=255)
                                                                                                            ggcagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACCCCCAGGCGCCCCGCCAGCGCCTGGCGATCGAACACCTGt                                   <  1:95292/146‑1 (MQ=255)
                                                                                                             gaagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGaa                                                                                      >  3:224443/1‑97 (MQ=255)
                                                                                                             gaagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGaa                                                                                      <  4:224443/97‑1 (MQ=255)
                                                                                                              aagtgaaACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTc                                  <  2:302929/148‑1 (MQ=255)
                                                                                                                   aaaCAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTgc                            <  2:275635/149‑1 (MQ=255)
                                                                                                                                   cTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTTACGCACgg             >  4:335698/1‑149 (MQ=255)
                                                                                                                                    ttGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGGGATCGAACAACTGTc                                  <  6:76150/127‑1 (MQ=255)
                                                                                                                                    ttGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGGGATCGAACAACTGTc                                  >  5:76150/1‑127 (MQ=255)
                                                                                                                                    ttGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGc            >  2:206392/1‑149 (MQ=255)
                                                                                                                                     gtgaaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCt                                <  1:346165/123‑1 (MQ=255)
                                                                                                                                     gtgaaaGGGGCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCt                                >  2:346165/6‑128 (MQ=255)
                                                                                                                                      gATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCt          >  6:239967/1‑149 (MQ=255)
                                                                                                                                       aTCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCtt         >  8:123701/1‑149 (MQ=255)
                                                                                                                                            gggCCGCTGCGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGc    >  3:77574/1‑149 (MQ=255)
                                                                                                                                              gCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCt  >  6:60840/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
GATCGCCGAGAAGATTTCGGACAAGATCCGTGGTCGCAAGCCACTGCCGCGCAGCACCGCCAAGTACTACGTGGCGGGGGATGCACCAGTGAAAGGCAAGCCGATGCGTGAAGTGAAACAGGGCTGAGGCCTTGATCAGGGGCCGCGCAGCGGCCCCTTTCACGTTTGCTCAGGCGGGCAGCGCAAAAAATGTGCGCATCAACGAATCATCCTCGACACCCAGTCGCCCCGCCAGCGCCTGGCGATCGAACAACTGTCCTGTGCGCATTTCACGCACGGCCTTCCCGCCT  >  NC_002947/5777255‑5777544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: