| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,845,237 | C→A | 8.0% | R50R (CGG→AGG) | coaD → | phosphopantetheine adenylyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,845,237 | 0 | C | A | 8.0% | 227.0 / 8.5 | 75 | R50R (CGG→AGG) | coaD | phosphopantetheine adenylyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (31/38); new base A (4/2); total (35/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.35e-01 | |||||||||||
ACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTCGAGTACGAGTT > NC_002947/5845094‑5845385 | aCCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGtt < 5:281605/149‑1 (MQ=255)aCCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGtt < 4:138889/149‑1 (MQ=255)aCCGAGTGTTCTACCCGGGGACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGCTCCAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCATTGTTCCCCCTGCAACAACGGGtt < 5:72067/149‑1 (MQ=255) cGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGa < 1:29568/149‑1 (MQ=255) cGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAG‑AAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAg > 4:250527/1‑149 (MQ=255) ttgtACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGc < 7:990/149‑1 (MQ=255) ttgtACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGc < 5:93822/149‑1 (MQ=255) ccGGGTACTTTCGACCCCATTAGAAAAGGCCATGGCGATCTGGTCGAGCGCGCTGCGCGGCTATTCGACCACGTGAACATCGCGGTGGCGGCCCGCCCCAAGAAAAACCATTTGTACCCCCTGGAACAACGGGTAGAGAGCGCCCga > 7:58154/1‑146 (MQ=255) ccGGGTACTTTCGACCCCATTAGAAAAGACAATGGCAATCTGGTCGAGCGCGATTCGCGGATATTAAACAAAGTGATAAAAGAGGTGGCGGCCAGCCCAAAAAAAAACCATTTTTAACAACTGGAACAACGGTTTAAAAACGCCCGt > 7:56680/1‑147 (MQ=255) gggTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAgg < 1:222348/149‑1 (MQ=255) gggTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAgg > 7:155667/1‑149 (MQ=255) ggTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAG‑AAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTc < 3:250527/149‑1 (MQ=255) gACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCACCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCa > 2:259629/1‑149 (MQ=255) cccATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCt > 7:143983/1‑149 (MQ=255) cATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGaacaac < 7:160994/113‑1 (MQ=255) cATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGaacaac > 8:160994/1‑113 (MQ=255) cATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGGGGAACAAAggg < 6:363791/116‑1 (MQ=255) cATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCGTTGTTCCAGGGGGAACAAAggg > 5:363791/1‑116 (MQ=255) aTTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGcc > 7:28797/1‑149 (MQ=255) ttACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGccc < 5:287542/149‑1 (MQ=255) ccAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGa < 5:236852/127‑1 (MQ=255) ccAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGa > 6:236852/1‑127 (MQ=255) ccAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAAt > 6:312525/1‑149 (MQ=255) aaaGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAGCAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGt > 6:166488/1‑149 (MQ=255) gCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAGCAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGaa < 5:166488/149‑1 (MQ=255) gCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGaa < 8:143983/149‑1 (MQ=255) ccATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGGCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAg < 7:178888/149‑1 (MQ=255) ccATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAg > 2:287077/1‑149 (MQ=255) ccATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAg > 2:282309/1‑149 (MQ=255) aTGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGt > 4:232825/1‑148 (MQ=255) cGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCg > 5:78168/1‑149 (MQ=255) gATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGc > 5:86078/1‑107 (MQ=255) gATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGc < 6:86078/107‑1 (MQ=255) ggTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTtct > 7:253930/1‑149 (MQ=255) ggTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTtct > 2:69571/1‑149 (MQ=255) ggcGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGGGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTtc < 8:58154/145‑1 (MQ=255) gTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTtc < 8:56680/147‑1 (MQ=255) tCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTctct > 1:135452/1‑149 (MQ=255) tCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTctct < 1:69571/149‑1 (MQ=255) gAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTc < 4:98409/149‑1 (MQ=255) cTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTg > 8:176710/1‑149 (MQ=255) ttCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTACCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCAACATGGACCTGCCGATTGTCGAAGTCATCGGCTTCGCTTCCCTGTTgg > 4:270005/1‑149 (MQ=255) gCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCAtt < 8:155667/149‑1 (MQ=255) gCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCAtt > 5:87894/1‑149 (MQ=255) cTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGTAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCAttt < 1:259629/149‑1 (MQ=255) ttCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCg < 5:49035/148‑1 (MQ=255) cGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGAAATGCGcc < 2:135452/148‑1 (MQ=255) cACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGAAATGCGCCaacag < 1:358078/149‑4 (MQ=255) gTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGaa > 2:189153/1‑147 (MQ=255) atcatcGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAggg < 1:287077/149‑1 (MQ=255) atcatcGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAggg < 1:282309/149‑1 (MQ=255) atcGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGgcgc > 6:284736/1‑149 (MQ=255) cgGTGGCGGGCAGCCCCAAGAAAAACGCTTTGTTCGCCCTTGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAAc < 4:191822/149‑1 (MQ=255) ggTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACg > 8:352775/1‑149 (MQ=255) gTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGt < 5:284736/149‑1 (MQ=255) cggcCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTc < 7:176710/149‑1 (MQ=255) ggcCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGccc > 2:98823/1‑56 (MQ=255) cAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGc < 5:312525/149‑1 (MQ=255) cccAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTgg > 2:186610/1‑149 (MQ=255) ccAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGc > 5:70108/1‑149 (MQ=255) aaGAAAAACCCATTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGGCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCt < 6:295560/149‑1 (MQ=255) gctcaaCCCGTTGTTCCAGGGGGAACAAAGGGTTGAGCTCGCCCGTGAGGTCACCGAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgc > 5:306570/5‑149 (MQ=255) gAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGGCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgc < 7:352775/149‑1 (MQ=255) caaCCCGTTGTTCCAGGGGGAACAAAGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgcgtg > 3:95940/2‑149 (MQ=255) aaCCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgcgtgc > 4:149709/1‑149 (MQ=255) aaCCCGTTGTTCCAGGGGGAACAAAGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCtgcgtgc > 7:78340/1‑149 (MQ=255) aCCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAACTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCCCCAACGTCTTCCTGCGTGGCCtgcgtgcg < 1:119543/149‑1 (MQ=255) ccTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGGGTGGCCTGCGTGCGgt > 7:108860/1‑149 (MQ=255) ccTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGgt < 6:87894/149‑1 (MQ=255) gTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCaa < 5:144273/102‑1 (MQ=255) gTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCaa > 6:144273/1‑102 (MQ=255) gTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTcc < 4:39278/148‑1 (MQ=255) ccccTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACtt < 8:28797/149‑1 (MQ=255) cccTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTc > 3:56698/1‑149 (MQ=255) cccTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTc < 6:78168/149‑1 (MQ=255) agggggAACAAAGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTc < 4:95940/145‑1 (MQ=255) ccTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTCg < 3:232825/149‑1 (MQ=255) aacaacGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTCGAGTAc > 5:384121/1‑149 (MQ=255) acaaaGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTCGAGTAc < 8:78340/148‑1 (MQ=255) caacGGTTTGAGCTCGCACGTGAGGTCACCAAGCACCTGCCCAATTTCGAAGTCATCGTCTTATCTTCCCTGTTGGCGCATTTCTCCAAGGAACAGTGCGCCAACGTCTTc < 2:91113/111‑1 (MQ=255) caacGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCAGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACttcttc > 1:91113/1‑111 (MQ=255) cGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTCGAGTACGAGtt > 8:181463/1‑149 (MQ=255) | ACCGAGTGTTGTACCCGGGTACTTTCGACCCCATTACCAAAGGCCATGGCGATCTGGTCGAGCGCGCTTCGCGGCTATTCGACCACGTGATCATCGCGGTGGCGGCCAGCCCCAAGAAAAACCCTTTGTTCCCCCTGGAACAACGGGTTGAGCTCGCCCGTGAGGTCACCAAGCACCTGCCCAATGTCGAAGTCATCGGCTTCTCTTCCCTGTTGGCGCATTTCGCCAAGGAACAGGGCGCCAACGTCTTCCTGCGTGGCCTGCGTGCGGTGTCCGACTTCGAGTACGAGTT > NC_002947/5845094‑5845385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |