| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,849,046 | C→T | 6.3% | intergenic (+21/‑250) | rlmI → / → ilvD | ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,849,046 | 0 | C | T | 6.3% | 237.3 / 3.5 | 79 | intergenic (+21/‑250) | rlmI/ilvD | ribosomal RNA large subunit methyltransferase I/dihydroxy‑acid dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (37/37); new base T (3/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCCGC > NC_002947/5848901‑5849190 | aCCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAg > 7:169392/1‑149 (MQ=255) tGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCgg > 3:255789/1‑149 (MQ=255) gACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCCTCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGATGATATCTGCCAAAAAGGGCCGCCCAGCGGcc > 8:146219/1‑149 (MQ=255) gACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCgg < 1:171767/147‑1 (MQ=255) gACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGcc < 2:49502/149‑1 (MQ=255) cGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGgccgcc > 5:147901/1‑138 (MQ=255) cGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGgccgcc < 6:147901/138‑1 (MQ=255) cGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACAGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCtt < 1:268057/149‑1 (MQ=255) cAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTc < 4:255789/149‑1 (MQ=255) cAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCCCTGGGCGGCCCtttt < 5:196193/149‑2 (MQ=255) aCATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCt < 3:242623/149‑1 (MQ=255) cATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTg > 7:361279/1‑149 (MQ=255) ggCAGCTGCGCGCGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCAGCGCCGAAACCCGCTACCTCAAAAGCCTCACCTGCCGGTTACTGCCAACCAGCTGATAGCTGCCAAAACGGGCCGCCCCGCGGCCCTTTCCTGcc < 3:250188/148‑1 (MQ=255) aGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCTGGGCGGCCCtttt < 5:338787/141‑2 (MQ=255) aGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCTGGGCGGCCCtttt > 6:338787/1‑140 (MQ=255) gctgctCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCaa < 8:287416/149‑1 (MQ=255) gctgctCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCa > 4:101458/1‑148 (MQ=255) ctgctCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAAt < 3:266693/149‑1 (MQ=255) ctCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATccc > 5:207731/1‑149 (MQ=255) tCGAGCGAGGCGGTCAGGGCCCGGATCACCCGGGTACACCCGCCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACACCTGATATCTGCCAAAAAGGGACGCCCAGCGGCCCTTTCCTGCAGCAATccc > 1:243043/1‑149 (MQ=255) tCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATcccc > 6:130262/1‑149 (MQ=255) gCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAAcc < 6:186980/149‑1 (MQ=255) aGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGcc > 6:346386/1‑125 (MQ=255) aGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGcc < 5:346386/125‑1 (MQ=255) ggCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACAt > 1:95318/1‑149 (MQ=255) ggATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCa < 1:175024/149‑1 (MQ=255) gATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCAt > 7:148815/1‑149 (MQ=255) cACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTcc > 3:9477/1‑149 (MQ=255) aCCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTTCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTcc < 6:361326/148‑1 (MQ=255) ccc‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCt > 4:259042/1‑149 (MQ=255) ccc‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCt < 8:148815/149‑1 (MQ=255) cc‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCAtt < 8:248059/144‑1 (MQ=255) cc‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCAtt > 7:248059/1‑144 (MQ=255) cc‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCt > 3:376650/1‑148 (MQ=255) cc‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTAACTGCCAACCAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTCCCGCAATCCCCCCGCCACCCCTCCCCATCTGCATTCCCt > 5:51185/1‑148 (MQ=255) cGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTc > 3:76578/1‑96 (MQ=255) cGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTc < 4:76578/96‑1 (MQ=255) aTCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgtg > 2:303627/1‑149 (MQ=255) aTCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgtg > 1:337161/1‑149 (MQ=255) gCCGAAAGCCGCTACATCAAAAGCATGACCTGGCTGTTACTGCCAAACAGCTGATATGTGCCATAATGGGCCGCCCAGGGGCCCGTTCCTGCCGGATTCCGCCCGCCAAGCTTGCTCATCTGCAGTCCCTCACCGCGCCAGCGGTGTa < 6:51185/148‑1 (MQ=255) aCCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATACCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCgg < 7:146219/149‑1 (MQ=255) cccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGc < 2:95318/149‑1 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGcc > 6:325471/1‑149 (MQ=255) ccGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGc > 5:98343/1‑148 (MQ=255) cGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGcc > 4:52200/1‑148 (MQ=255) gCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATccc < 3:350026/91‑1 (MQ=255) gCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATccc > 4:350026/1‑91 (MQ=255) aTCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgtgt < 7:70392/132‑1 (MQ=255) aTCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgtgt > 8:70392/1‑132 (MQ=255) aTCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCAt < 7:213176/149‑1 (MQ=255) tCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCgcgc > 1:5903/1‑122 (MQ=255) tCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCgcgc < 2:5903/122‑1 (MQ=255) tCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATc > 8:283131/1‑149 (MQ=255) aaaaGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGc < 4:376650/149‑1 (MQ=255) aaaaGCATCACCTGCCGGTTACTGCCAAACAGCTCATATCTGCCAAAAAGGCCCGCCCAGCCGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATATGCATTCCCTCACCCCCCCCGCGGTGTAGAATCGGCCAAATCCTCGc > 5:71795/1‑149 (MQ=255) tCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgt < 1:190401/120‑1 (MQ=255) tCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgt > 2:190401/1‑120 (MQ=255) ccTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATccc < 8:361279/149‑1 (MQ=255) ccTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATccc < 6:98343/149‑1 (MQ=255) ccGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCcggc > 1:370385/1‑149 (MQ=255) ttACTGCCAAACAGCTGATAGCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTGCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCTGGt < 6:71795/149‑1 (MQ=255) aCTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGtt < 3:101458/148‑1 (MQ=255) tGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTAt < 2:337161/149‑1 (MQ=255) ccAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgt > 4:211864/1‑103 (MQ=255) ccAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGgt < 3:211864/103‑1 (MQ=255) ccAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTAt < 5:325471/147‑1 (MQ=255) ccAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTAt < 3:52200/147‑1 (MQ=255) ccAAACAGATGATATCTGCCAAAAAGTGCCGCCCAGCGGCCCTTTCCTGCCGCAATCGCCCCGCAAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGACTATTCATCGCCAGTCATCCCCGGCGGGTTTAt < 5:310233/147‑1 (MQ=255) cAAACAGCTGATATATGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCCCAATCCCCCCGACAACAATACACATCTGCATTCCCTCACCACGCCAGCGGTGTAGAATCCGCCTATTAATCGCCAGTCATCCCCGCCGCGTTTAt > 5:385661/1‑146 (MQ=255) tGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCggg > 3:36738/1‑133 (MQ=255) tGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCggg < 4:36738/133‑1 (MQ=255) atatCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCaa < 6:207731/149‑1 (MQ=255) atatCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCaa < 5:130262/149‑1 (MQ=255) cAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcgg > 5:151700/1‑149 (MQ=255) aaaaaGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcggc > 5:106436/1‑149 (MQ=255) aaaaaGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTACCTAACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcggc > 6:266103/1‑149 (MQ=255) gaaaGGGCCGCTGGGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACgcggc > 5:58483/2‑148 (MQ=255) aaGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGTGTTTATGAGCTCTGGTCAAGCACGCGGCGAt > 2:69379/1‑149 (MQ=255) aGGGCCGCTGGGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATc > 8:208792/1‑149 (MQ=255) ggCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGAt > 6:154323/1‑146 (MQ=255) ggCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGAt < 5:154323/146‑1 (MQ=255) ccgccCAGCGGCCCTTTCCTGCCGCAATCCCCCCACCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCcgc > 3:290613/1‑149 (MQ=255) | ACCTGGACCGCAACATGCAGCTGCTCGAGCGAGGCGGTCAGGGCCCGGATCACCC‑GGTACACCCGGCCATCGCCGAAACCCGCTACATCAAAAGCATCACCTGCCGGTTACTGCCAAACAGCTGATATCTGCCAAAAAGGGCCGCCCAGCGGCCCTTTCCTGCCGCAATCCCCCCGCCAACCATCCACATCTGCATTCCCTCACCGCGCCAGCGGTGTAGAATCGGCCTATTCATCGCCAGTCATCCCCGGCGGGTTTATGAGCTCTGGTCAAGCACGCGGCGATCCCGC > NC_002947/5848901‑5849190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |