| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,851,171 | T→A | 6.3% | intergenic (+34/+34) | ilvD → / ← PP_5129 | dihydroxy‑acid dehydratase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,851,171 | 0 | T | A | 6.3% | 263.8 / 5.1 | 89 | intergenic (+34/+34) | ilvD/PP_5129 | dihydroxy‑acid dehydratase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (41/42); new base A (3/2); total (45/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.35e-01 | |||||||||||
GCCAGCCGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCCCTCC > NC_002947/5851023‑5851318 | gccagccGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCt > 5:164364/1‑149 (MQ=255) gccGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGgc > 3:315245/1‑149 (MQ=255) aGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCGCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCg < 5:387961/149‑1 (MQ=255) gtccgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑t > 6:135363/1‑149 (MQ=255) tccgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑tt < 2:887/149‑1 (MQ=255) ccgtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑ttt > 7:189132/1‑149 (MQ=255) gtccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑ttttt < 4:190105/149‑1 (MQ=255) tccACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCG‑CCTGGGCGCCGG‑ttttttt < 1:357608/149‑1 (MQ=255) cGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGa > 1:9131/1‑149 (MQ=255) gCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGAt < 3:237028/149‑1 (MQ=255) cAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGAtt < 6:164364/149‑1 (MQ=255) cAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGGGCGGTGCGTAACAAGGCAATCCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGAtt < 7:162108/149‑1 (MQ=255) aaGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGTACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTg > 1:208862/1‑149 (MQ=255) atgTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGTGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTATGAGGTTCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCTCCGG‑TTTTTTTTGATTGt < 4:309577/147‑1 (MQ=255) ggTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGtt > 8:276358/1‑149 (MQ=255) gTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTc < 2:263140/149‑1 (MQ=255) tAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCa > 3:364224/1‑149 (MQ=255) tAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCa < 3:21227/149‑1 (MQ=255) accaccGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCAtt < 1:337286/149‑1 (MQ=255) gcgcTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAATGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGt < 5:299767/149‑1 (MQ=255) tGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGt < 7:305167/149‑1 (MQ=255) cccTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCTTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTg < 8:189132/148‑1 (MQ=255) ctgctgGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAATCGAGGTGGCt < 2:9131/149‑1 (MQ=255) ctgctgGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCt < 6:325982/149‑1 (MQ=255) gctgGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAACTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTgg < 6:190757/149‑1 (MQ=255) ctgGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACg > 8:124417/1‑126 (MQ=255) ctgGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACg < 7:124417/126‑1 (MQ=255) ctgGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTgg < 4:315245/148‑1 (MQ=255) tgGCCACCACTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCACTCAGCTGCTATTAGCGTGAAATAAGAACCGGAGCCCTGGCCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCTGTGAAGCGAGGTGGATggg > 6:235928/1‑148 (MQ=255) gCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCg < 7:274805/149‑1 (MQ=255) ccaccaGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCAGGGCGCCGG‑ttc > 4:285119/1‑101 (MQ=255) ccaccaGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCAGGGCGCCGG‑ttc < 3:285119/102‑2 (MQ=255) ccaGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATc > 2:176608/1‑149 (MQ=255) cGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACa > 6:390554/1‑149 (MQ=255) aCAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACAtt > 4:130571/1‑148 (MQ=255) aCAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTg < 4:364224/149‑1 (MQ=255) cAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGa < 7:276358/149‑1 (MQ=255) aGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGTACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACa < 2:208862/149‑1 (MQ=255) gTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGagag < 2:7657/149‑1 (MQ=255) gTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGagag < 1:176608/149‑1 (MQ=255) cAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGAGAGCTTTTGGAGAGCGAt > 4:180512/1‑149 (MQ=255) aaGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTTTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGAtt > 7:357629/1‑149 (MQ=255) ggCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGt > 6:214635/1‑90 (MQ=255) ggCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGt < 5:214635/90‑1 (MQ=255) cAATGCTGGATGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCaa < 5:135363/149‑1 (MQ=255) aaTGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAg > 5:80073/1‑149 (MQ=255) gCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGgag < 1:155732/134‑1 (MQ=255) gCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGgag > 2:155732/1‑134 (MQ=255) tGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATGGAAACATTGACAGCTTTTGGAGAGCGATTACAAGTGCCt > 8:318972/1‑149 (MQ=255) gAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGagag > 1:236173/1‑132 (MQ=255) gAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGagag < 2:236173/132‑1 (MQ=255) ccTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATc > 8:295150/1‑149 (MQ=255) ctctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTgg < 4:265466/94‑1 (MQ=255) ctctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTgg > 3:265466/1‑94 (MQ=255) ctctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATc > 7:64855/1‑148 (MQ=255) ctctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATc > 7:180989/1‑148 (MQ=255) tctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGaa < 2:239685/80‑1 (MQ=255) tctGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGaa > 1:239685/1‑80 (MQ=255) tGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGttt > 4:11208/1‑149 (MQ=255) tGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGttt < 3:130571/149‑1 (MQ=255) gCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGttt > 8:231496/1‑148 (MQ=255) ttttAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGa < 6:139912/48‑1 (MQ=255) ttttAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGa > 5:139912/1‑48 (MQ=255) tAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGGTTTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCtt < 5:390554/148‑1 (MQ=255) gTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGa < 6:242263/149‑1 (MQ=255) gTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGa < 8:180989/149‑1 (MQ=255) aaaaaaaaCCGGCGCCCCGGGCGCCGG‑TTTTTTTTGAGTGTGCAGGGCCGGTCAGGGCAGCGAGGGGGCGGGGGCGGATCGAAACATTGACAGCTGTGGGAGCGCGATTCCACGTGCCTCGTCAGCGACCAGTTGGCGTTTTCGagcag > 3:259863/7‑149 (MQ=255) aaaaaaaaCCGGCGCCCAGGGCGCCGG‑TTTTTTTTGATTGTTAATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGagcag > 2:61865/7‑149 (MQ=255) aaTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAAc > 2:95860/1‑130 (MQ=255) aaTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAAc < 1:95860/130‑1 (MQ=255) aTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAAc < 8:348154/84‑1 (MQ=255) aTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAAc > 7:348154/1‑84 (MQ=255) aTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGagcagc > 2:81470/1‑149 (MQ=255) aTAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGagcagc < 7:231496/149‑1 (MQ=255) tAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCg > 5:10850/1‑149 (MQ=255) tAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCg > 8:290665/1‑149 (MQ=255) gAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCa > 1:378560/1‑149 (MQ=255) gAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCa > 4:113117/1‑149 (MQ=255) aaCCGGCGCCCTGGGTGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGc < 8:67652/147‑1 (MQ=255) aaCCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGc > 7:67652/1‑147 (MQ=255) aCCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCTGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCAcc > 7:131723/1‑149 (MQ=255) ccGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGAGCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCAcc > 8:127641/1‑148 (MQ=255) ccGGCGCCCAGGGCGCCGG‑TTTTTTTTGATTGTTCACTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGc > 6:343972/1‑109 (MQ=255) ccGGCGCCCAGGGCGCCGG‑TTTTTTTTGATTGTTCACTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGc < 5:343972/109‑1 (MQ=255) ctcccTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTTGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTAccc < 5:235928/147‑1 (MQ=255) cccTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCcct > 6:283839/1‑149 (MQ=255) ccTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGTCGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCcctc > 1:236785/1‑149 (MQ=255) ccTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGc < 2:142657/102‑1 (MQ=255) ccTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGc > 1:142657/1‑102 (MQ=255) cTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACAcctcc > 4:329524/1‑149 (MQ=255) | GCCAGCCGAGGTCCGTCCACGCAAGGTAACCACCGCGCTCAAGGCCTATGCCCTGCTGGCCACCAGTGCCGACAAGGGTGCGGTGCGTAACAAGGCAATGCTGGAAGGCCTCTGAGGTGCTTTTAGCGTGAAATAAGAACCGGCGCCCTGGGCGCCGG‑TTTTTTTTGATTGTTCATTGACGGTCAGTGAAGCGAGGTGGCTGGGTCGGATCGAAACATTGACAGCTTTTGGAGAGCGATTCCAAGTGCCTCGTCATCGAACAGTTTGCTTTTTCGAGCAGCGGCACCTACCCCTCC > NC_002947/5851023‑5851318 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |