Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,887,637 A→G 6.6% K165E (AAG→GAG)  PP_5162 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,887,6370AG 6.6% 174.7 / 2.1 60K165E (AAG→GAG) PP_5162hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (30/26);  new base G (2/2);  total (32/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CATCACCCACCTGCCCGGCAGCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGCCGGCGCC  >  NC_002947/5887492‑5887785
                                                                                                                                                 |                                                                                                                                                    
cATCACCCACCTGCCCGGCAGCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAgg                                                                                                                                                   <  7:282071/149‑1 (MQ=255)
    acccaccTGCCCGGCAGCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCtt                                                                                                                                                <  8:104475/148‑1 (MQ=255)
      ccaccTGCCCGGCAGCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGc                                                                                                                                             >  5:284261/1‑149 (MQ=255)
        accTGCCCGGCAGCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTc                                                                                                                                           >  1:277873/1‑149 (MQ=255)
                    gCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAg                                                                                                                               <  3:172416/149‑1 (MQ=255)
                           cctgcctgCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACg                                                                                                                        >  7:196734/1‑149 (MQ=255)
                                      ccccGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATAcc                                                                                                             <  7:333815/149‑1 (MQ=255)
                                        ccGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTc                                                                                                                    <  6:337139/140‑1 (MQ=255)
                                        ccGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTc                                                                                                                    >  5:337139/1‑140 (MQ=255)
                                              gTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAAt                                                                                                                <  1:287581/138‑1 (MQ=255)
                                              gTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAAt                                                                                                                >  2:287581/1‑138 (MQ=255)
                                              gTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCgg                                                                                                      >  1:208230/1‑148 (MQ=255)
                                                 gCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCtt                                                                                                                                                <  6:213280/103‑1 (MQ=255)
                                                 gCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCtt                                                                                                                                                >  5:213280/1‑103 (MQ=255)
                                                   cATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGgct                                                                                                >  3:142968/1‑149 (MQ=255)
                                                   cATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGgct                                                                                                >  6:81037/1‑149 (MQ=255)
                                                    aTCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGgctg                                                                                               >  6:165878/1‑149 (MQ=255)
                                                          gACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGgcc                                                                                                                                    >  2:145722/1‑106 (MQ=255)
                                                               gCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCtt                                                                                    <  8:50537/149‑1 (MQ=255)
                                                                   ggCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTc                                                                                >  6:102197/1‑149 (MQ=255)
                                                                      cgccTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCggg                                                                             <  8:196734/149‑1 (MQ=255)
                                                                       gccTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGc                                                                            >  4:62965/1‑149 (MQ=255)
                                                                            gCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGAc                                                                        <  3:84440/148‑1 (MQ=255)
                                                                            gCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGAc                                                                        <  4:142968/148‑1 (MQ=255)
                                                                              ttATTTTGGCCCCTACAGCGAAGGTGCCGTCTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGa                                                                     >  1:32558/1‑149 (MQ=255)
                                                                              ttATTTTGGCCACTACAGCGAAGGTGCCGTGTGCAACACCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGa                                                                     >  1:258048/1‑149 (MQ=255)
                                                                                    tGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTc                                                                <  5:165878/148‑1 (MQ=255)
                                                                                      gCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGcc                                                             >  3:165438/1‑149 (MQ=255)
                                                                                        cccTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCt                                                                                     <  3:52287/123‑1 (MQ=255)
                                                                                        cccTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCt                                                                                     >  4:52287/1‑123 (MQ=255)
                                                                                        cccTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCgg                                                           <  6:284261/149‑1 (MQ=255)
                                                                                         ccTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCggg                                                          <  8:150617/149‑1 (MQ=255)
                                                                                          cTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCTAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGt                                                         >  5:69079/1‑149 (MQ=255)
                                                                                          cTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGt                                                         >  2:117539/1‑149 (MQ=255)
                                                                                              aGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTAcc                                                     <  2:277873/149‑1 (MQ=255)
                                                                                               gCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTAc                                                      <  5:112744/147‑1 (MQ=255)
                                                                                               gCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTAc                                                      >  6:112744/1‑147 (MQ=255)
                                                                                                        ccGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTc                                           <  5:102197/149‑1 (MQ=255)
                                                                                                               cAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTcgc                                         <  8:316378/144‑1 (MQ=255)
                                                                                                               cAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTcgc                                         >  7:316378/1‑144 (MQ=255)
                                                                                                                  cGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCgg                                 <  5:81037/149‑1 (MQ=255)
                                                                                                                   gCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTAcc                                                     <  5:165354/128‑1 (MQ=255)
                                                                                                                   gCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTAcc                                                     >  6:165354/1‑128 (MQ=255)
                                                                                                                        cAACAGCTTCATCGCGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTCCCCACCACCGTCGCGCCCGCGGGCACAt                           >  1:185095/1‑149 (MQ=255)
                                                                                                                           cAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTAAACGCCTCCAATACACTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGGCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATccc                        >  2:360521/1‑149 (MQ=255)
                                                                                                                             gCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATccctg                      <  2:258048/149‑3 (MQ=255)
                                                                                                                                 cgtCGAGCAAAGCCTTGAGGATTGGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCgg                      <  1:283638/143‑1 (MQ=255)
                                                                                                                                 cgtCGAGCAAAGCCTTGAGGATTGGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCgg                      >  2:283638/3‑145 (MQ=255)
                                                                                                                                 cATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGt                    <  2:208230/147‑1 (MQ=255)
                                                                                                                                   tCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTcac                 >  8:144681/1‑148 (MQ=255)
                                                                                                                                    cGAGCAAAGCCTTGAGGATTGGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCt                                                                           <  1:317909/89‑1 (MQ=37)
                                                                                                                                    cGAGCAAAGCCTTGAGGATTGGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCt                                                                           >  2:317909/1‑89 (MQ=37)
                                                                                                                                       gCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCacac            >  2:178106/1‑149 (MQ=255)
                                                                                                                                         cAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTg          >  3:91192/1‑149 (MQ=255)
                                                                                                                                          aaTCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGc         >  3:377047/1‑149 (MQ=255)
                                                                                                                                           aTCCTCAAGGCTTTGCTCGACGGTCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTc                                           >  6:48006/1‑114 (MQ=255)
                                                                                                                                           aTCCTCAAGGCTTTGCTCGACGGTCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTc                                           <  5:48006/114‑1 (MQ=255)
                                                                                                                                           aTCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGcc        <  4:91192/149‑1 (MQ=255)
                                                                                                                                              cTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGCCGgc     <  2:32558/149‑1 (MQ=255)
                                                                                                                                              cTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGCCGgc     >  2:220204/1‑149 (MQ=255)
                                                                                                                                                 aaGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGCCGGCGcc  >  6:119195/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CATCACCCACCTGCCCGGCAGCGAGCACCTGCCTGCGTCCCCGGCCGTGGCCATCTGGGACCGGCAAGGCCGCCTGGCTTATTTTGGCCCCTACAGCGAAGGTGCCGTGTGCAACGCCAGCAACAGCTTCATCGAGCCAATCCTCAAGGCTTTGCTCGACGGCCGCCAGGTCAACGCCTCCAATACCCTGGCGGTAGGCTGCTACTGCCCTTGGTCGGGCTGACGGACCCTCGCCGGGTTACCCACCACCGTCGCGCCCGCGGGCACATCCCGGGTCACCACACTGCCGGCGCC  >  NC_002947/5887492‑5887785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑