| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,819 | T→C | 29.2% | intergenic (+113/‑433) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,819 | 0 | T | C | 29.2% | 93.9 / 49.8 | 72 | intergenic (+113/‑433) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base T (26/25); new base C (10/11); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
AGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTC > NC_002947/5988672‑5988963 | agctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtgtg > 7:140238/1‑149 (MQ=255) gccggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGAGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtgtg < 1:269655/146‑1 (MQ=255) ctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTgg < 3:147038/148‑1 (MQ=255) tcaggttttcgccggtcgattttcaggggctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgtccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCgggattt < 4:133013‑M2/62‑4 (MQ=255) ttgttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAcg > 3:210866/1‑149 (MQ=255) gttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAcgcg > 7:282535/1‑149 (MQ=255) gttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCAcgc < 4:210866/148‑1 (MQ=255) ttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAg > 6:311968/1‑149 (MQ=255) aTTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCTGGCCAATCCCTCCTGTGCCAGGCGCGCGCGaccgc > 3:74657/1‑145 (MQ=17) ggATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTg < 4:189241/149‑1 (MQ=255) cGGACTGAGGCCTTTTGGCGGGTGCCTTGAGGGTTGTAGTGCCTGTGTGTTTGGGCGCGGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCGAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGgcgc < 8:140238/148‑1 (MQ=37) cGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCa > 6:27940/1‑149 (MQ=255) ggACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGcc < 4:324294/138‑1 (MQ=255) ggACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGcc > 3:324294/1‑138 (MQ=255) ggACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCAc > 1:86571/1‑149 (MQ=255) aCTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGc < 4:166799/149‑1 (MQ=255) cagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGgggcatgtc > 2:376134‑M2/63‑145 (MQ=255) gCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGa > 8:92494/1‑148 (MQ=255) cctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGTGCGACCGCCTTGGGGCATGTCTCGat < 2:109221‑M2/92‑1 (MQ=255) cTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGatat > 6:165027/1‑149 (MQ=255) gggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCACCTTGGGGCATGTCTCg > 8:356567‑M2/55‑144 (MQ=255) gggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCACCTTGGGGCATGTCTCg < 7:356567‑M2/90‑1 (MQ=255) tttGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATcg > 3:51869/1‑149 (MQ=255) ggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATcg < 6:62520‑M2/96‑1 (MQ=255) gtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGcgtc < 8:272975‑M2/100‑1 (MQ=255) gcgcGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGcgtc < 5:165027/149‑1 (MQ=255) tgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCgg > 7:241284‑M2/49‑105 (MQ=255) cgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTGGATATCGCGTCGTac > 5:41106‑M2/45‑148 (MQ=255) cgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTac > 7:178361‑M2/45‑148 (MQ=255) gccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTaca < 1:376134‑M2/105‑1 (MQ=255) ccTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTaca‑aa < 1:378874/149‑1 (MQ=255) ccTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTaca‑aa < 1:373060/149‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGat > 7:25546/1‑133 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGat < 8:25546/133‑1 (MQ=255) aGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAgg < 4:51869/149‑1 (MQ=255) ggTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGc < 8:97535/148‑1 (MQ=255) agtttcagcgcctgggagttcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCg < 7:195373‑M2/114‑1 (MQ=255) gTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCgg < 5:311968/149‑1 (MQ=255) tttcagcgcctgggagatcgggcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGc < 1:227727‑M2/113‑1 (MQ=255) tttcagcgcctgggagatcgggcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGc > 2:227727‑M2/34‑146 (MQ=255) tcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCGGTcg > 1:80611‑M2/32‑149 (MQ=255) tcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCGGTc < 8:349028‑M2/117‑1 (MQ=255) cgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCGGTcgcgcg < 2:80611‑M2/122‑1 (MQ=255) gcctgggagatcgagcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCGGTcgcgcgc < 4:84309‑M2/123‑1 (MQ=255) gcgaagcgccgcgcgggCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGcac > 5:203433‑M2/18‑149 (MQ=255) aTTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGGGCGCCTGGca > 8:223311/1‑148 (MQ=255) gcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCgcgcgcgc > 6:291016‑M2/13‑137 (MQ=255) gcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACaggag < 8:282535‑M2/137‑1 (MQ=255) gcgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGGTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCgcgcgcgc < 5:291016‑M2/125‑1 (MQ=255) cgccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACaggagg < 7:92494‑M2/138‑1 (MQ=255) gccgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAggg < 2:86571‑M2/139‑1 (MQ=255) cgcccgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGGGCGCCTGGCACAGGAGGGAt < 7:223311‑M2/141‑1 (MQ=255) cgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGCGCGCGACCgccttgt > 5:317666‑M2/5‑131 (MQ=255) cgcgCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGCGCGCGACCgccttgt < 6:317666‑M2/130‑4 (MQ=255) gCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGc > 2:294218‑M2/2‑146 (MQ=255) gcgcTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGGCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaa < 6:203433/149‑1 (MQ=255) cTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCGCGATGTCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCCCAGGAGGGATTGGCCAGaaaca > 3:89335/1‑148 (MQ=255) ttCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa < 4:311366/149‑1 (MQ=255) cgcg‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGaaacaaa < 1:347890/147‑1 (MQ=255) ggTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACACAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAg < 1:294218/149‑1 (MQ=255) aaCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCg > 8:119901/1‑149 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGa < 6:59615/53‑1 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGa > 5:59615/1‑53 (MQ=255) aCCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg > 5:289908/1‑149 (MQ=255) ccGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGtt > 7:356525/1‑149 (MQ=11) cGTTTGTTTCGGGCCAATTATTCCTGCGGGATTTGCGCGCGACCCCCATGGGGCAAGTCTCGATATCGCGTCGTACA‑AACAAGGCGGTAGCGCGCGACAGGGGCAGGAGGGACTGGCC‑GAAAAAATAGTAGGAGCGGGGTTACCcgcg > 2:374496/1‑148 (MQ=255) gtttgtttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCcgcg > 4:74657/1‑148 (MQ=255) tttCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAgcgc > 4:364196/1‑149 (MQ=255) gggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCa < 2:288527/109‑1 (MQ=255) gggCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCa > 1:288527/1‑109 (MQ=255) caattATTCCTGCGGGATTTGCGCGCGACCGCCTTGGGGCATGTCTCGATATCGCGTCGTACA‑AACAAGGCAGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggc > 2:247814/4‑149 (MQ=21) aGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggc > 5:103466/1‑149 (MQ=255) ttATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgggcgg > 7:209519/1‑149 (MQ=255) cTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAACGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTc > 6:184066/1‑148 (MQ=255) | AGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCG‑GGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTGTGGGACGCGCACGCGAGCCCCCTGGCGCACGCCTCGATATCGCGTCGTACA‑AACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTC > NC_002947/5988672‑5988963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |