| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,061,027 | G→A | 5.6% | intergenic (‑108/+41) | PP_5312 ← / ← hupA | hypothetical protein/DNA‑binding protein HU‑alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,061,027 | 0 | G | A | 5.6% | 264.0 / 2.8 | 88 | intergenic (‑108/+41) | PP_5312/hupA | hypothetical protein/DNA‑binding protein HU‑alpha |
| Reads supporting (aligned to +/- strand): ref base G (44/39); new base A (2/3); total (46/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.97e-01 | |||||||||||
AGCCCCATGGCCCAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCGGTTCCC > NC_002947/6060885‑6061174 | aGCCCCATGGCCCAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGgcgc > 3:347673/1‑149 (MQ=255)aGCCCCATGGCAAAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGAGCAGTTTATCCTTTTCCAGAACTATTTATGAAAGTTCGAAAGATTATGCCTGCAGAAAGCACAACGGCCGCCTTGGGgcgc > 4:19271/1‑149 (MQ=255) ccccATGGCCCAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGccc < 1:161982/149‑1 (MQ=255) ccccATGGCCCAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGccc > 3:257192/1‑149 (MQ=255) aTGGCCCAGAGAAGAACGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCCCAAGGCGCCCgttg < 1:271253/149‑4 (MQ=255) tGGCCCAGAGAAGAAACCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTg < 1:169277/149‑1 (MQ=255) ccggtgagagAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTg < 8:289312/143‑1 (MQ=255) cAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACGAAGGCGCGCAGTTTAACCGTTTCCAGAACTAGTTATGCAAGTTCGAAACATTTTGCCTGCAGCACGCACAACGGGCGCCATGGGGCGCCCGCTTGGCCGa > 7:327880/1‑149 (MQ=255) agagAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGa > 1:183540/1‑148 (MQ=255) gagaAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGaca > 5:148650/1‑149 (MQ=255) gagaAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCCCAAGGCGCCCgttgtgc > 5:301602/1‑138 (MQ=255) gagaAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCCCAAGGCGCCCgttgtgc < 6:301602/144‑7 (MQ=255) aagaaAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTg > 8:292527/1‑149 (MQ=255) aacaacgCGGAACTTCATCAACGCGCCTCGAATGAAACGTCACTAAGGCGCGCAGTTTATCCTTTTCCACAACTATTTATGCAAGTTCTAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTg < 4:165516/143‑1 (MQ=255) aaaGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTgggg > 4:252456/1‑149 (MQ=255) cctatctaCTTCATCAACTCGCGTCTAATGAAATGTGAATAAGGCGCTCTGTTTATCCTTTTCCATAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACACCGGGCGCCTGGGGGCGCCCGCTTGGCCGACACTgggg < 4:225417/141‑1 (MQ=255) ggAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTc < 2:253161/149‑1 (MQ=255) taaCTACCTCAACGCGCCTCTAATGAAATTTGACTTAGGCGCGCAGTTTATCCTTTTCCATAACTATTTATGCATGTTCGAAACATTTTGCCTGCACAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCa < 4:347673/148‑1 (MQ=255) aCTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATTCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCaga < 7:140566/149‑1 (MQ=255) aCTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCaga < 3:119524/149‑1 (MQ=255) cTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTgggg > 3:225417/1‑140 (MQ=255) ttCATCAACGCGCCTCTATTTAAAATTTAATAAGCCGGGCATTTTATCCTTTACCAGAAATTTTTTTGCAAGTTCTAAAAATTTTGCGTGCAGAAAGCAAAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCagaga < 4:11004/149‑1 (MQ=255) ttCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCagaga < 3:252456/149‑1 (MQ=255) tattcaACGCGCCGCGAAGGAAATGGTACTACGGCGCGCAGTTTATCCTTTTCCAGAACAATTTTTGCAAGTTCGAAACTTTTGGCCTGCCGAAAGCACACCGGGCGCGTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCagaga < 8:327880/145‑1 (MQ=255) tcaACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGa > 7:94591/1‑149 (MQ=255) caACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGa > 6:49194/1‑148 (MQ=255) aaCGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTggg > 4:33720/1‑109 (MQ=255) aaCGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTggg < 3:33720/109‑1 (MQ=255) aaCGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGAt > 6:56608/1‑148 (MQ=255) aCGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCa > 6:335678/1‑149 (MQ=255) aCGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGCGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATc > 7:280716/1‑148 (MQ=255) gcCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑g < 7:292527/149‑1 (MQ=255) gcCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCCCAAGGCGCCCgtt < 7:165797/113‑3 (MQ=255) gcCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCCCAAGGCGCCCgtt > 8:165797/1‑111 (MQ=255) cTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑Gcc > 6:152594/1‑149 (MQ=255) gAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCttt > 4:54739/1‑149 (MQ=255) aaTGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTc > 3:267014/1‑149 (MQ=255) aTGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCGTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCt < 5:355334/149‑1 (MQ=255) aaaGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTTTTTATCCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTtggc < 2:199724/149‑1 (MQ=255) aaaGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTtggc < 5:49194/149‑1 (MQ=255) cTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTg > 5:120159/1‑149 (MQ=255) cTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTg > 4:291351/1‑149 (MQ=255) aGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCg < 7:92156/149‑1 (MQ=255) aGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAAAATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACAATGGGGTAGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCg > 7:296613/1‑149 (MQ=255) gcgcgcAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGCCTTGGCggt > 2:262011/1‑148 (MQ=255) gcgcgcAGTTTATCCCTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCggg > 7:44429/1‑149 (MQ=255) cgcAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTc > 1:188576/1‑129 (MQ=255) cgcAGTTTATCCTTATCCCGAACTCTTTATGCAAGTGCGAAACATTTTGCCTGCCGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGc < 4:257192/149‑1 (MQ=255) gTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGtt > 3:325925/1‑148 (MQ=255) ttATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAAc > 6:352024/1‑149 (MQ=255) tCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGc < 5:352024/148‑1 (MQ=255) tCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCt < 8:94591/149‑1 (MQ=255) tCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCt < 5:335678/149‑1 (MQ=255) cTTTTCCAGAACTATTTAGGCAAGTTCGAATCATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGt < 5:178197/149‑1 (MQ=255) ttttCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCggg < 7:236424/134‑1 (MQ=255) ttttCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCggg > 8:236424/1‑134 (MQ=255) ttttCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGt > 2:166124/1‑148 (MQ=255) ttttCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGt > 1:378713/1‑148 (MQ=255) agagCTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACtt < 1:63049/104‑1 (MQ=255) aGATCTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACtt > 2:63049/1‑104 (MQ=255) gAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTTCGCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAg < 1:79199/149‑1 (MQ=255) tATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCt > 1:217035/1‑149 (MQ=255) aTGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGc > 3:369316/1‑147 (MQ=255) tGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCa < 6:120159/148‑1 (MQ=255) gCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGc < 2:133637/135‑1 (MQ=255) gCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGc > 1:133637/1‑135 (MQ=255) gTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTg < 3:291351/149‑1 (MQ=255) gAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAg < 5:152594/148‑1 (MQ=255) gAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGCGCGCCCGCTTGGCCGACACTCGGGTTCTCAGAGACCGATCACTT‑GCCTTACTTGGCTGGCTTGGCGCGCGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAgg > 8:358164/1‑149 (MQ=255) ttttGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACgg < 1:166124/149‑1 (MQ=255) tGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTa < 8:44429/148‑1 (MQ=255) tGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTa < 4:369316/148‑1 (MQ=255) gcgtGCAGAAAGCACAACGGGCGCTTTGGGGCGCCCGCTTGGCCGACACTTGGGTTGTCAGAGAGCGATGACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACTCTTTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTAt < 8:296613/145‑1 (MQ=255) tGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTtggctggc > 6:360071/1‑87 (MQ=255) cAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTgg > 2:11859/1‑149 (MQ=255) gAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGATTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGcc > 1:275546/1‑149 (MQ=255) aaaGCACAACGGGCGCCTTGGGGGGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCt < 3:19271/149‑1 (MQ=255) aaaGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCt < 3:173896/149‑1 (MQ=255) aaaGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCt > 5:260297/1‑149 (MQ=255) cacaACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGAt > 6:192678/1‑149 (MQ=255) caACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCt > 5:24125/1‑149 (MQ=255) aaCGGGGGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGc < 8:79521/51‑1 (MQ=255) aaCGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGc > 7:79521/1‑51 (MQ=255) aaCGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCtt > 5:226518/1‑149 (MQ=255) aaCGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCtt < 6:148650/149‑1 (MQ=255) gggCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGAc < 3:54739/149‑1 (MQ=255) cgcCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCgg > 3:114975/1‑149 (MQ=255) cTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCGGTTc > 7:357805/1‑149 (MQ=255) cTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCGGTTc < 2:378713/149‑1 (MQ=255) ttGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCGGTTcc > 2:201830/1‑149 (MQ=255) ggggCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCGGTTccc < 5:192678/148‑1 (MQ=255) | AGCCCCATGGCCCAGAGAAGAAAGCGGAACTTCATCAACGCGCCTCGAATGAAAAGTGACTAAGGCGCGCAGTTTATCCTTTTCCAGAACTATTTATGCAAGTTCGAAACATTTTGCCTGCAGAAAGCACAACGGGCGCCTTGGGGCGCCCGCTTGGCCGACACTGGGGTTGTCAGAGAGCGATCACTT‑GCCTTTCTTGGCTGGCTTGGCGGGGGCGTTAACGCTGTCACGCAGGTTCTTGCCAGGCTTGAAGGCCACGGTATTGCTGGCCTTGATCTTGACCGGTTCCC > NC_002947/6060885‑6061174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |