| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,087,362 | A→C | 5.8% | Q295P (CAG→CCG) | oruR → | ornithine utilization transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,087,362 | 0 | A | C | 5.8% | 270.3 / 4.0 | 86 | Q295P (CAG→CCG) | oruR | ornithine utilization transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (39/42); new base C (2/3); total (41/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01 | |||||||||||
CCTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCC > NC_002947/6087219‑6087508 | ccTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCTGCAAATGCCGgcgc < 8:283604/149‑1 (MQ=255) cTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCt > 2:367530/1‑149 (MQ=255) gAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTgg > 7:362065/1‑149 (MQ=255) aCCTTTAATTCTCCGTTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTggg < 7:171505/148‑1 (MQ=255) cTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTTCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcag > 1:328913/1‑149 (MQ=255) cTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcag > 1:334235/1‑149 (MQ=255) ttGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcag > 2:152919/1‑148 (MQ=255) ttGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcag > 8:223512/1‑148 (MQ=255) gAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcagca < 1:139337/148‑1 (MQ=255) gAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcagca < 3:21886/148‑1 (MQ=255) aaTTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGcagcag < 8:140895/148‑1 (MQ=255) ttCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTa > 2:248537/1‑149 (MQ=255) ttCACCGGTCGCCAGGCATGGCAGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTa > 7:55817/1‑149 (MQ=255) tCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTa > 3:226588/1‑148 (MQ=255) tCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTAt > 6:321350/1‑149 (MQ=255) ccGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa < 6:256236/149‑1 (MQ=255) ccGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCaa < 3:273977/149‑1 (MQ=255) ggTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcagca > 4:166223/1‑139 (MQ=255) ggTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgcagca < 3:166223/139‑1 (MQ=255) gTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAg > 5:25830/1‑149 (MQ=255) ccAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGt > 6:92848/1‑149 (MQ=255) aGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTg < 1:367530/149‑1 (MQ=255) ggCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTg > 3:376658/1‑148 (MQ=255) aTGGCTGGGACGGATTCGCCAGCTGCTGGCGCATCAACTGGACGCAGCCCATCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGa < 1:315916/149‑1 (MQ=255) aTGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCAGCGCCTGCAAATGCCGgcgca > 7:48952/1‑119 (MQ=255) aTGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCAGCGCCTGCAAATGCCGgcgca < 8:48952/120‑2 (MQ=255) ggACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGa < 1:152919/148‑1 (MQ=255) gACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATc > 3:272550/1‑126 (MQ=255) gACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATc < 4:272550/126‑1 (MQ=255) aCGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGt > 5:289247/1‑149 (MQ=255) aCGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGATGTTGGACGAGCTGAGGt > 5:315169/1‑149 (MQ=255) ggATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCAATTGCAGGCGCTGGGCAGCAGTTATCAACAGGTGTTGGACGAGCTGAGGtac > 8:176274/1‑147 (MQ=255) aTTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGa < 6:24626/149‑1 (MQ=255) ttCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAg > 3:220130/1‑149 (MQ=255) ccAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCggg > 3:67582/1‑149 (MQ=255) ctgGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGgca < 8:294863/100‑1 (MQ=255) ctgGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAg < 1:248537/147‑1 (MQ=255) gcgcAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGGTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGtt < 1:253901/149‑1 (MQ=255) gcagcaACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGc < 7:30295/149‑1 (MQ=255) cagcaACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCt < 4:226588/149‑1 (MQ=255) agcaACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTg > 6:137305/1‑149 (MQ=255) agcaACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTg < 2:378414/149‑1 (MQ=255) caACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGc < 2:334235/149‑1 (MQ=255) caACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGAAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGc < 2:328913/149‑1 (MQ=255) aCTGGACGCAT‑‑CACCCTGTTTGTATGGTCTTGCGATGCAGATGATCTGCTCTTCGCGCAACCTGCTGCGGAATTTGAAGGCGATGTGCAGCAGTTATTAAAATTTGTTGGACGAGCTGAGGTTCGAGAgg < 4:326427/130‑1 (MQ=255) aCTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCgg > 3:326427/1‑130 (MQ=255) cTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGa < 4:220130/149‑1 (MQ=255) tGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGAt < 3:73000/149‑1 (MQ=255) cacag‑‑caCCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTg < 8:8921/77‑1 (MQ=255) ag‑‑caCCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGaa > 8:335643/1‑145 (MQ=255) cccGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGcc > 6:273281/1‑149 (MQ=255) ccGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGcc > 3:50255/1‑148 (MQ=255) ccGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCg < 8:75839/149‑1 (MQ=255) cGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGa > 2:252512/1‑149 (MQ=255) gggCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGa > 6:11554/1‑148 (MQ=255) gCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATc > 7:303728/1‑148 (MQ=255) gggCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGAt > 8:76808/1‑149 (MQ=255) gCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCCGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTg < 3:109854/149‑1 (MQ=255) cTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTg > 2:60027/1‑148 (MQ=255) ttGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTg > 7:349506/1‑147 (MQ=255) gcgcGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGAt > 4:292073/1‑120 (MQ=255) gcgcGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGAt < 3:292073/120‑1 (MQ=255) gcgcGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCa < 5:321350/147‑1 (MQ=255) gcgcGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCa < 8:349506/147‑1 (MQ=255) cgcgGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCaga < 7:76808/148‑1 (MQ=255) gATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTgg < 4:50255/149‑1 (MQ=255) aTGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTggg < 5:137305/149‑1 (MQ=255) tGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCTGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTggg < 5:11554/148‑1 (MQ=255) caCTGCTCTTCGCGACCCCTGCGCCGGCATTTGCAGGCTCTGTGCAGCAGTTCTCAACAGCTGTTGGACGAGCTGAGGTTCGAGCTGGCAAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTggg < 6:315169/145‑1 (MQ=255) aCTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCgg < 6:189584/128‑1 (MQ=255) aCTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCgg > 5:189584/1‑128 (MQ=255) cTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGtt > 5:387677/1‑147 (MQ=255) ctctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAATTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAg < 8:362065/147‑1 (MQ=255) tctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGt > 2:345629/1‑147 (MQ=255) ctTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGt > 2:167461/1‑146 (MQ=255) gcgcACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGaa < 1:236007/100‑1 (MQ=255) gcgcACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGaa > 2:236007/1‑100 (MQ=255) gcACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGc > 6:2490/1‑148 (MQ=255) gcgcCTGCAAATGCCGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTc > 1:38629/1‑149 (MQ=255) gcgcCTGCAAATGCCGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTc < 2:38629/149‑1 (MQ=255) cgcCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTc < 5:2490/148‑1 (MQ=255) ccGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGc < 5:273281/149‑1 (MQ=255) tttGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGaa > 4:357572/1‑82 (MQ=255) tttGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGaa < 3:357572/82‑1 (MQ=255) gCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTc < 7:223512/148‑1 (MQ=255) cAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTcc < 1:150497/148‑1 (MQ=255) aGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGTCGATGAACAGATGCCGATCTACCTGATTGCAGAGACTTTGGGGTTCAGTgag < 8:125825/122‑1 (MQ=255) aGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGTCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTgag > 7:125825/1‑122 (MQ=255) | CCTGAACCTTGAATTCACCGGTCGCCAGGCATGGCTGGGACGGATTCGCCAGCTGCTGGCGCAGCAACTGGACGCAG‑‑CACCCGGGCTGGAAGGGCTTGCGCGGCAGATGAACTGCTCTTCGCGCACCCTGCGCCGGCATTTGCAGGCGCTGGGCAGCAGTTATCAACAGCTGTTGGACGAGCTGAGGTTCGAGCGGGCCAAGCAGTTGCTGGCCGATGAACAGATGCCGATCTACCGGATTGCAGAGACTTTGGGGTTCAGTGAGACGGCCAGTTTTCGGCATGCCTTCC > NC_002947/6087219‑6087508 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |