| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 68,342 | A→T | 10.5% | intergenic (+30/+145) | PP_0057 → / ← PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 68,342 | 0 | A | T | 10.5% | 256.4 / 14.2 | 93 | intergenic (+30/+145) | PP_0057/PP_0058 | major facilitator family transporter/1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (43/40); new base T (6/4); total (49/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGG > NC_002947/68196‑68486 | tataCCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACATAGTCTGATGTGCACATGCCATAAAAAAACCGGCTGTa > 8:584/1‑147 (MQ=255) taCCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTaaaa < 8:134259/148‑1 (MQ=255) taCCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTaaaa < 8:139419/148‑1 (MQ=255) cGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCg > 6:153358/1‑149 (MQ=255) cGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCg > 1:305444/1‑149 (MQ=255) ggggATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCgg < 6:31286/149‑1 (MQ=255) gggATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGt > 1:226931/1‑149 (MQ=255) ggATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGtt > 2:115568/1‑149 (MQ=255) gATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGttt < 3:11610/149‑1 (MQ=255) tatCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGttt‑t‑t < 6:38385/149‑1 (MQ=255) cttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCGGttt‑t‑t < 7:294609/146‑1 (MQ=255) cttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTTACAGCCGGttt‑t‑t > 8:294609/1‑146 (MQ=255) cttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTa > 2:912/1‑149 (MQ=255) ttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGGCATAAAAAAACCGGCTTTTACAGCCgg < 2:348944/140‑1 (MQ=255) ttctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGGCATAAAAAAACCGGCTTTTACAGCCgg > 1:348944/1‑140 (MQ=255) ctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTa < 2:269024/146‑1 (MQ=255) ctACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTAt < 6:205585/147‑1 (MQ=255) atccGGCCTGTGGTACCCGGTGCTTGTGACCGGGATCAGCCTGGTGGTTGGTATCTTCTGTCTGAGATAAAACAAGGATGTAGATATCGACAAAGTCTGATGTTCACATGTCATAAAAAATCCTTTTTTTACAGCCGGTTT‑T‑TTTATg < 7:239054/145‑1 (MQ=255) gggCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTc > 2:44772/1‑148 (MQ=255) gggCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTc > 3:123511/1‑148 (MQ=255) cccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTAt < 6:81372/149‑1 (MQ=255) cccGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTAt < 2:305444/149‑1 (MQ=255) cGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATg > 5:310715/1‑148 (MQ=255) ccGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAg < 5:291874/148‑1 (MQ=255) cGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGAtt‑tt < 8:18609/144‑1 (MQ=255) cGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGAtt‑tt > 7:18609/1‑144 (MQ=255) cGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGa > 5:19491/1‑148 (MQ=255) gggATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGAtt‑tt > 1:308708/1‑143 (MQ=255) gggATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGAtt‑tt < 2:308708/143‑1 (MQ=255) ggATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGaaa > 8:71581/1‑148 (MQ=255) gATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCAGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACTATT‑TTCaagatag > 1:102506/1‑143 (MQ=255) cttCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTc < 2:102506/140‑1 (MQ=255) aTCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGaaaaaa > 2:169720/1‑149 (MQ=255) tCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAAt < 2:226931/149‑1 (MQ=255) aGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTc < 8:189133/149‑1 (MQ=255) aGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTc < 6:19491/149‑1 (MQ=255) tggtggTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCAGGATT‑TTCAGAAAAAATTCATa > 4:58776/1‑148 (MQ=255) tggtggTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATa > 4:198119/1‑148 (MQ=255) tggtTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTTTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACaaa < 2:317299/149‑1 (MQ=255) ggtTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACa > 3:220775/1‑146 (MQ=255) ttctGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAg > 5:7335/1‑149 (MQ=255) ctgtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACt < 1:115568/145‑1 (MQ=255) gtctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCaaa > 1:206100/1‑149 (MQ=255) tctgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCaaa < 5:153358/148‑1 (MQ=255) tgAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAAtt > 7:262826/1‑148 (MQ=255) agagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGAtt < 1:287627/108‑1 (MQ=255) agagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGAtt > 2:287627/1‑108 (MQ=255) agagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCa < 1:169720/148‑1 (MQ=255) gagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCGTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATa > 2:38636/1‑149 (MQ=255) gagaAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCAGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATAAAAAGAAATAACTAGAAAATTCATa > 7:31053/1‑149 (MQ=255) tccAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAATTCCGGGTGTAATAGCCGGTTT‑T‑TTTATGCCTCAAATTAACTTATGCACGATT‑TTCAGAAATAATTCATACAAAGAAATAACTAGCAAATTCATACACtt < 6:312475/148‑1 (MQ=255) aCCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACtt < 3:152669/149‑1 (MQ=255) ccAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACAGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCAAGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACtt > 1:148758/1‑148 (MQ=255) cAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTa < 4:333274/131‑1 (MQ=255) cAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTa > 3:333274/1‑131 (MQ=255) aaGGATGTAGATATCGACAAAGTCTGATGTGCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTc > 1:30459/1‑138 (MQ=255) aaGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTc < 2:30459/138‑1 (MQ=255) ggATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGata > 5:135433/1‑149 (MQ=255) gATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAAtt < 2:206100/148‑1 (MQ=255) gATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTc < 1:912/149‑1 (MQ=255) atatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTc < 6:364759/103‑1 (MQ=255) atatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTc > 5:364759/1‑103 (MQ=255) atatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTc > 8:90745/1‑148 (MQ=255) tatCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAATAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCaa < 6:135433/149‑1 (MQ=255) atCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAg > 6:340857/1‑149 (MQ=255) atCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAg > 8:140433/1‑149 (MQ=255) aCAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCAtt > 7:118721/1‑149 (MQ=255) cAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATa < 8:129183/99‑1 (MQ=255) cAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATa > 7:129183/1‑99 (MQ=255) aaaGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCATATTCATACACTTAGATATCAATTCAAGCATTTa < 1:44772/149‑1 (MQ=255) aaaGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTa < 4:123511/149‑1 (MQ=255) aGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTaa > 4:72811/1‑148 (MQ=255) gTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCAAGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATc < 3:58776/149‑1 (MQ=255) tGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTTGT‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGa > 1:79168/1‑126 (MQ=255) tGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGa < 2:79168/125‑1 (MQ=255) aTGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCa < 8:34437/128‑1 (MQ=255) aTGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCa > 7:34437/1‑128 (MQ=255) tGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCaaaaa < 7:71581/149‑1 (MQ=255) gTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAAc > 8:326029/1‑149 (MQ=255) acaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGca < 3:72811/149‑1 (MQ=255) acaTGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGc > 4:142920/1‑148 (MQ=255) tAAAAAAACCGGGTTTTACAGCCGGTTT‑T‑TTTATGCCTCAAAAAACCTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCAAAAAACTGACCACAAGt > 7:144512/1‑148 (MQ=255) tAAAAAAACCGGCTTTTACAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTTGATATAAATTAAAGCATTTAATCCAAAAACTACACaaaacg > 8:333911/1‑146 (MQ=38) tAAAAAAACCGGCTGTAAAAGCCGGTTT‑TATTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGt > 1:221001/1‑149 (MQ=255) tAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGtt < 5:340857/149‑1 (MQ=255) aaaaaCCGGCTGTAAAAGCCTGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc < 3:198119/149‑1 (MQ=255) aaaaaCCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATc < 7:90745/149‑1 (MQ=255) aaaCCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCca < 7:140433/149‑1 (MQ=255) aaCCGGCTTTTACAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATcaa > 5:302834/1‑146 (MQ=255) aCCGGCTTTTACAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCcaca > 3:74483/1‑149 (MQ=255) ccGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCca > 6:72968/1‑146 (MQ=255) cGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAg > 3:291996/1‑148 (MQ=255) ggCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGaa < 4:220775/149‑1 (MQ=255) cTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAg < 7:326029/148‑1 (MQ=255) tGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATTGTTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCAAAAAACTGCACACAAGTTATCAACAGAAgg > 1:274246/1‑149 (MQ=255) tGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATACAAAAAATGAAAACAAGTTATCAACATAAgg > 7:163103/1‑148 (MQ=255) | TATACCGGGGATATCTTCTACGGGCTGTGGTACCCGGTGCTGGTGACCGGGATCAGCCTGGTGGTTGGGATCTTCTGTCTGAGAGAAACCAAGGATGTAGATATCGACAAAGTCTGATGTCCACATGCCATAAAAAAACCGGCTGTAAAAGCCGGTTT‑T‑TTTATGCCTCAAAAAAACTTATGCACGATT‑TTCAGAAAAAATTCATACAAAGAAATAACTAGCAAATTCATACACTTAGATATCAATTCAAGCATTTAATCCAAAAACTGCACACAAGTTATCCACAGAAGG > NC_002947/68196‑68486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |