| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 77,503 | A→T | 6.2% | V14E (GTG→GAG) | rsmB ← | ribosomal RNA small subunit methyltransferase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 77,503 | 0 | A | T | 6.2% | 215.7 / 3.0 | 74 | V14E (GTG→GAG) | rsmB | ribosomal RNA small subunit methyltransferase B |
| Reads supporting (aligned to +/- strand): ref base A (37/31); new base T (2/3); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.59e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01 | |||||||||||
CAGCAGCTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCTCAGGGC > NC_002947/77358‑77650 | cagcagCTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAg > 3:237387/1‑149 (MQ=255) agcagcTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGc > 2:90555/1‑149 (MQ=255) gcagcTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCg > 8:17189/1‑149 (MQ=255) cagcTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCg < 1:322267/148‑1 (MQ=255) cagcTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCg > 2:322267/1‑148 (MQ=255) tgtgCGGCCAGCAGGTCGAGTCGTGGCTGCGATCGTTCGGTACCGTACGCGAGGTCCTGGTTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCATCGAAGCCTTGGCGCTGAGCACAGCGGCCAg < 8:35230/149‑1 (MQ=255) ccAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCCCgg > 1:171713/1‑149 (MQ=255) agcagGTAGAGGCGTGGCTGCCAGCGTGCCGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTGATCTACATTTTACAGTTGCGCCCGCAGCGAGCTGTTCAGCGAAGCCATGCCCCAGAACCCAAAGGCCAGCGCACCggc > 2:302169/1‑149 (MQ=255) aGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAg < 5:37370/149‑1 (MQ=255) gCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGc > 1:265103/1‑149 (MQ=255) cTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGTGCTCAGCGGCAAg < 8:288363/123‑1 (MQ=255) cTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGTGCTCAGCGGCAAg > 7:288363/1‑123 (MQ=255) gCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGtt > 2:132165/1‑148 (MQ=255) gCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTg < 3:296001/149‑1 (MQ=255) cGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTgg < 1:132165/149‑1 (MQ=255) gCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGGATCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGcc > 1:63087/1‑149 (MQ=255) cGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGccc < 1:90555/148‑1 (MQ=255) gTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCTCGTTCATCTACCTTGTCCAGTTGCTCCGGCAGCGAGCTGTTCAGCGAATCCTTGCCGCTGAGCACAGCGGCCAGCGCACGTTCGGCGGCGAGGCGTGGTTTCATTGGCCCAGc < 1:302169/149‑1 (MQ=255) tACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCa > 5:311872/1‑149 (MQ=255) ccGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCAcc < 6:220088/149‑1 (MQ=255) ccGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCAc < 7:358904/148‑1 (MQ=255) cGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCt > 5:285081/1‑149 (MQ=255) gAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCtt > 6:185696/1‑149 (MQ=255) cAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCcggc > 3:216023/1‑149 (MQ=255) tCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCggcggc > 5:325582/1‑148 (MQ=255) tGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAAc > 2:307267/1‑149 (MQ=255) gCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGTTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTcgcg > 1:76935/1‑149 (MQ=255) gCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGggcggcggc < 6:284225/99‑1 (MQ=255) gCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGggcggcggc > 5:284225/1‑99 (MQ=255) gCCGCGG‑TCGCGTTAATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGCCCAGCGAACGGGCGGCGGCCAGGCGTGGGTTCAATGGCCCAGCACCTTGCCGGCGGCCAACTTCTcgcg > 8:335115/1‑149 (MQ=255) ccGCGG‑TCGCTTTCATGTAGCTTTTACAGTTGCGCCGGCAGCGAGCTGTTGAGCGAAGGGTTTGCGTTGATCAGAGGGGCCAGCTCACGTGCGGCGGCGAGGCGTGGGTTCATTGGACGTGGACTTTGCGGGGGGAGAACTtctggggg < 6:43951/149‑6 (MQ=255) ccGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTgg < 1:105165/107‑1 (MQ=255) ccGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTgg > 2:105165/1‑107 (MQ=255) ccGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCgcgg < 3:366689/149‑1 (MQ=255) ccGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGACCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCgcgg > 3:118543/1‑149 (MQ=255) gg‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGggcggcgg < 3:315764/93‑1 (MQ=255) gg‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGggcggcgg > 4:315764/1‑93 (MQ=255) gcgTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCTCAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGtt < 4:237387/149‑1 (MQ=255) cgTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTg < 5:380124/149‑1 (MQ=255) gTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTg > 6:360290/1‑148 (MQ=255) aTCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTg > 3:368203/1‑141 (MQ=255) aTCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTg < 4:368203/141‑1 (MQ=255) aTCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAg > 3:231052/1‑149 (MQ=255) aCCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTc > 4:202197/1‑148 (MQ=255) aCCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCa > 3:287948/1‑149 (MQ=255) gTCCAGTTGCGCCGGCAGCGAGCTGTTCATCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTg < 7:17189/147‑1 (MQ=255) tCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGaa < 2:171713/148‑1 (MQ=255) cAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGc < 4:216023/148‑1 (MQ=255) gcgcCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAAt < 5:185696/148‑1 (MQ=255) cGGCAGCGAGTTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCtt < 2:76935/149‑1 (MQ=255) cGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCtt > 8:17245/1‑149 (MQ=255) gCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTgc > 5:149549/1‑149 (MQ=255) gAGCTGTTCAGCGTAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTTGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCa < 7:335115/149‑1 (MQ=255) aGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCcg > 2:72443/1‑88 (MQ=255) aGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCcg < 1:72443/88‑1 (MQ=255) gCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAgg < 4:231052/149‑1 (MQ=255) gTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGcggcgg < 3:277783/105‑1 (MQ=255) gTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGcggcgg > 4:277783/1‑105 (MQ=255) gTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAg > 2:7177/1‑149 (MQ=255) cAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGtt < 1:7177/148‑1 (MQ=255) cGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAg > 5:4621/1‑149 (MQ=255) gCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCgg < 2:63087/149‑1 (MQ=255) gCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTACAGGCgg < 4:118543/149‑1 (MQ=255) ccTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCgg > 3:191903/1‑148 (MQ=255) ccTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCgg < 4:191903/148‑1 (MQ=255) ctggCCGCTGTGCTCAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAAt < 5:224971/117‑1 (MQ=255) ctggCCGCTGTGCTCAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAAt > 6:224971/4‑120 (MQ=255) ttGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGCACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTc > 4:139036/1‑149 (MQ=255) gCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTc < 3:202197/147‑1 (MQ=255) gCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCa < 6:325582/148‑1 (MQ=255) gCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCt > 8:25028/1‑149 (MQ=255) gCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTCGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCt > 2:300626/1‑149 (MQ=255) cTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCt > 5:316186/1‑148 (MQ=255) aGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCTCAgg > 6:172662/1‑149 (MQ=255) cacaGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCTCAGGGc < 4:287948/149‑1 (MQ=255) | CAGCAGCTGTGCGGCCAGCAGGTCGAGGCGTGGCTGCCAGCGTGCGGTACCGAACGCCAGGTCCTGGGTCAGGCCGCGG‑TCGCGTTCATCTACCTTGTCCAGTTGCGCCGGCAGCGAGCTGTTCAGCGAAGCCTTGCCGCTGAGCACAGCGGCCAGCGCACGGGCGGCGGCGAGGCGTGGGTTCATTGGCCCAGCACCTTGCCGGCGGCGAACTTCTCGCGGCGGCTGTTGAACAGGTCACTGAAGCTCAATGCCTTGCCGCCAGGCAGTTGCAGGCGGGTCAGGCTCAGGGC > NC_002947/77358‑77650 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |