| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 733,245 | A→G | 5.9% | intergenic (+220/‑143) | clpB → / → PP_t07 | chaperone protein ClpB/tRNA‑Asn |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 733,245 | 0 | A | G | 5.9% | 254.4 / 4.3 | 84 | intergenic (+220/‑143) | clpB/PP_t07 | chaperone protein ClpB/tRNA‑Asn |
| Reads supporting (aligned to +/- strand): ref base A (37/42); new base G (2/3); total (39/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
GGGCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAAGTTCAGTT > NC_002947/733102‑733388 | gggCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCa < 6:341312/148‑1 (MQ=255)gggCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAg > 4:107276/1‑149 (MQ=255) gCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTAAGGCACTAAGCGAAACACAAGCAACATCGGTGATCGCAAAACAACTTACaaaaaagt > 7:294390/1‑143 (MQ=255) tttGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGt > 3:176371/1‑149 (MQ=255) tttGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGt > 1:177148/1‑149 (MQ=255) ggCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTtga < 1:153172/148‑1 (MQ=255) gCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACTGATTTGTAAGTtgttt > 3:62880/1‑146 (MQ=255) gCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTtgaat < 3:107276/149‑1 (MQ=255) ccAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACTGATTTGTAAGTtgtttt < 5:317577/149‑5 (MQ=255) ccAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTtgaat > 6:311272/1‑148 (MQ=255) cAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACTGATTTGTAAGTtgttttg < 4:62880/149‑6 (MQ=255) cAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTtgaatg > 4:173982/1‑148 (MQ=255) aaCCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTtgaa > 4:284233/1‑145 (MQ=255) aaCCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTtgaa < 3:284233/145‑1 (MQ=255) aCCCGGTGTAACCGCCTGAAATTTTTGAAATTTTTTCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCTCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCTGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGaaa < 3:206341/149‑1 (MQ=255) ccGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGaaaa > 7:9048/1‑148 (MQ=255) ggggTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGaaaaaaa < 8:300692/149‑1 (MQ=255) ggggTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGaaaaaaa < 2:31216/149‑1 (MQ=255) gTAACCGGCTGAAATTTTTGAAATTTTTTCTTGCATCAAATTTAGATTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTg < 8:294390/149‑1 (MQ=255) gTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAgag > 7:282367/1‑147 (MQ=255) gTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTg < 3:334983/149‑1 (MQ=255) gTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTg < 5:311272/149‑1 (MQ=255) aCCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGtt < 3:283270/149‑1 (MQ=255) cGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGa > 1:168807/1‑149 (MQ=255) ccTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGAc > 5:41369/1‑148 (MQ=255) aatttttgaaatttttgCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCaa < 7:271683/149‑1 (MQ=255) ttgaaatttttgCTTGCATGAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAATCACCAGCAACATCGGTTATCGCAAAACAACTTACAAATCAGTAAGTTGTATGAAAAAAAGTGGTTGACAAGCAAAACg < 8:29518/148‑1 (MQ=255) tgaaatttttgCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACga < 5:193717/148‑1 (MQ=255) tctatttttgCTTTAATAAAATTTTGATTGACCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATAGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACgaa < 6:87869/145‑1 (MQ=255) tttttgCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATg < 5:132619/149‑1 (MQ=255) tttttgCTTGCATCAAATTTAGAGTGCCACTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACAAGCAACATAGGAGATCCCAAAACAACTTACAAATAAGTAAGTTGAAATAAAAAAAGTGGTTGACAAGCAAAACgaa > 5:87869/1‑144 (MQ=255) gcATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAAGACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAAAGTAGAATAGc > 3:141781/1‑149 (MQ=255) tCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCgg > 7:327265/1‑149 (MQ=255) tCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCgg < 3:173982/149‑1 (MQ=255) cAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAg < 8:83365/139‑1 (MQ=255) cAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAg > 7:83365/1‑139 (MQ=255) aaTTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCt < 8:282367/149‑1 (MQ=255) tttAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTca < 6:63268/149‑1 (MQ=255) gagTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTcagcag < 2:168807/149‑1 (MQ=255) gTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCg < 4:176371/149‑1 (MQ=255) cccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCaaaa > 1:277585/1‑113 (MQ=255) cccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCaaaa < 2:277585/113‑1 (MQ=255) cccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACaa > 2:244635/1‑149 (MQ=255) cccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGATGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACaa > 1:94728/1‑149 (MQ=255) cccTAATACACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACaa > 8:205610/1‑149 (MQ=255) ccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAAc > 2:162266/1‑149 (MQ=255) ccTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAAc > 8:337921/1‑149 (MQ=255) cTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTa < 2:277624/122‑1 (MQ=255) cTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTa > 1:277624/1‑122 (MQ=255) tAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAAcgc > 7:114750/1‑149 (MQ=255) atatACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAAcgcg < 6:41369/148‑1 (MQ=255) tataCGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTa > 3:191136/1‑118 (MQ=255) tataCGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTa < 4:191136/118‑1 (MQ=255) taCGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGaaa < 7:337921/148‑1 (MQ=255) taCGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGaaa < 8:9048/148‑1 (MQ=255) aCGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGc > 4:368741/1‑149 (MQ=255) gccgcGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGa < 8:147355/135‑1 (MQ=255) gccgcGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGa > 7:147355/1‑135 (MQ=255) ccgcGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCgaa < 2:94728/149‑1 (MQ=255) aGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTaaa < 8:114750/148‑1 (MQ=255) ggCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAaga < 7:205610/149‑1 (MQ=255) aCTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTaaa < 3:12983/144‑1 (MQ=255) aCTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTaaa > 4:12983/1‑144 (MQ=255) aCTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTc < 3:368741/149‑1 (MQ=255) tAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTcc > 3:8513/1‑148 (MQ=255) cGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGc > 6:201499/1‑149 (MQ=255) gAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCg < 1:36882/100‑1 (MQ=255) gAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCg > 2:36882/1‑100 (MQ=255) gAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGGTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCg < 8:327265/149‑1 (MQ=255) aaCACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGACGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGaa < 2:177148/149‑1 (MQ=255) acCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGC‑AAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGaa < 6:302616/145‑1 (MQ=255) acCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGC‑AAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGaa > 5:302616/1‑145 (MQ=255) cAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCt > 7:186758/1‑149 (MQ=255) cAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAACAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCt > 1:302752/1‑149 (MQ=255) aCATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTc < 5:201499/149‑1 (MQ=255) aaaaCAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCg < 3:257394/100‑1 (MQ=255) aaaaCAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCg > 4:257394/1‑100 (MQ=255) aaaaCAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTaaa < 8:258216/111‑1 (MQ=255) aaaaCAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTaaa > 7:258216/1‑111 (MQ=255) ttcaacTTACTGATTTGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTc < 2:222491/112‑1 (MQ=255) ttcaacTTACTGATTTGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTc > 1:222491/3‑114 (MQ=255) cTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAagttcagt > 3:139319/1‑149 (MQ=255) ttACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAagttcagtt > 3:277139/1‑149 (MQ=255) aCAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCt < 3:218346/98‑1 (MQ=255) aCAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCt > 4:218346/1‑98 (MQ=255) | GGGCCTTTGGGCCAACCCGGGGTAACCGCCTGAAATTTTTGAAATTTTTGCTTGCATCAAATTTAGAGTGCCCCTAATATACGCCGCGTTGTCAGGCACTAAGCGAAACACCAGCAACATCGGTGATCGCAAAACAACTTACAAATCAGTAAGTTGAATGAAAAAAAGTGGTTGACAAGCAAAACGAAGAATGTAGAATAGCCGGCCTCAGCAGCGACAACGCGAAAGCGAAGAAGCTAAAGAGTCCGAAGCGAACACAGTCTTCGGAGTTGTACCGAAGTTCAGTT > NC_002947/733102‑733388 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |