| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 801,356 | T→C | 5.3% | intergenic (+29/‑160) | rpmA → / → obg | 50S ribosomal protein L27/GTPase Obg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 801,356 | 0 | T | C | 5.3% | 284.9 / 4.3 | 95 | intergenic (+29/‑160) | rpmA/obg | 50S ribosomal protein L27/GTPase Obg |
| Reads supporting (aligned to +/- strand): ref base T (41/48); new base C (2/3); total (44/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.87e-01 | |||||||||||
GCTGGCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGCCGAC > NC_002947/801208‑801501 | gCTGGCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCAt > 6:93642/1‑149 (MQ=255) tACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACg > 4:349520/1‑149 (MQ=255) gCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCGCATGACGGGGc < 4:71120/149‑1 (MQ=255) gCGTTGGCATGGGCAAGGACCACACCTTGCTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGc < 7:230530/149‑1 (MQ=255) gTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCtt > 7:103452/1‑149 (MQ=255) gCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTc < 5:93642/149‑1 (MQ=255) ggCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGttt < 4:318390/148‑1 (MQ=255) gCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTc < 1:237368/143‑1 (MQ=255) gCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTc > 2:237368/1‑143 (MQ=255) gCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgt > 6:38707/1‑149 (MQ=255) cAAGGACCACACCTTGTTCGCCAAGATCGCAGGCGTGAGCAAGTTCGAGAAGACAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGACGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 7:132343/149‑1 (MQ=255) cAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtttg > 5:35402/1‑149 (MQ=255) cAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 6:220020/149‑1 (MQ=255) cAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 8:103452/149‑1 (MQ=255) aCCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAg > 4:183864/1‑149 (MQ=255) ccACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACgggg > 7:87525/1‑129 (MQ=255) ccACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACgggg < 8:87525/129‑1 (MQ=255) ccACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGc > 5:142010/1‑149 (MQ=255) acacCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCct < 5:251916/149‑1 (MQ=255) acCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCctct > 8:80459/1‑149 (MQ=255) acCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCAGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCAAGCCACCGGGCTATTTCGTTTGTGGTGAGCctct > 2:343942/1‑149 (MQ=255) ccTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCtt < 5:38707/149‑1 (MQ=255) cTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTTAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTg > 5:88166/1‑149 (MQ=255) tCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTTAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCaaa < 6:88166/148‑1 (MQ=255) cGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAg < 4:251225/148‑1 (MQ=255) gCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGc > 8:357038/1‑148 (MQ=255) gCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGc < 7:357038/148‑1 (MQ=255) ccAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGa < 6:262791/133‑1 (MQ=255) ccAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGa > 5:262791/1‑133 (MQ=255) ccAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCCTTTGTGGTGAGCCTCTTGCaaacgtg > 8:338738/1‑145 (MQ=255) cAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGt > 5:304822/1‑149 (MQ=255) cAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGt < 4:174091/149‑1 (MQ=255) cAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGt < 6:374355/149‑1 (MQ=255) cAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGt > 4:362480/1‑149 (MQ=255) gAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCt < 4:327096/148‑1 (MQ=255) aaGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg > 4:325931/1‑120 (MQ=255) aaGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTtgtg < 3:325931/120‑1 (MQ=255) aaGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTgg < 6:142010/149‑1 (MQ=255) aaGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTgg < 3:362480/149‑1 (MQ=255) aGGCGTGATCAAGTTCGAGAAGAAAGGCTAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTggg < 3:229916/149‑1 (MQ=255) tGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGcc < 5:104829/149‑1 (MQ=255) aTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCtt < 4:356322/123‑1 (MQ=255) aTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCtt < 6:231203/123‑1 (MQ=255) aTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCtt > 5:231203/1‑123 (MQ=255) aTCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCtt > 3:356322/1‑123 (MQ=255) cAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCg > 2:353011/1‑149 (MQ=255) aaGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCTCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGt < 4:351636/149‑1 (MQ=255) aaGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGt > 1:174792/1‑149 (MQ=255) ttCGAGAAGATAGGCGTGTTCATGCGGCGTTAGGTGAGCATCGTCGCGGCTTAATCGCGACGTCGCTCCAGAAGCCGCGTCATGCGTCGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTgg < 1:343942/149‑1 (MQ=255) tCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCt < 2:79406/132‑1 (MQ=255) tCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCt > 1:79406/1‑132 (MQ=255) gagattaaaTGCGATTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCATATCTGTTTGTCTGTGtt < 8:212277/129‑1 (MQ=255) gagaAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGACGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCCACGGGGCTTTTTCGTTTGTGGTGAGACACTTGCAAAGATGTTTGTCTGGGtt > 7:212277/1‑135 (MQ=255) gagaAGAAAGGCGAGTTCATCCCCCGTTACGTGAGCATCGTCGCCGCTTAATAGAGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTATTCGTTTGTGGTGAGCCTCTTCAAAAGCTCATTGTCAGGGTTGCCGGCGTAGGtt > 6:41416/1‑148 (MQ=255) gaaAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACg > 5:355631/1‑149 (MQ=255) gCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCg > 1:87106/1‑148 (MQ=255) gAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGt > 5:245968/1‑135 (MQ=255) gAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGt < 6:245968/135‑1 (MQ=255) aGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACg < 6:35402/149‑1 (MQ=255) ttCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACggg > 7:282431/1‑149 (MQ=255) tCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACggg < 6:355631/148‑1 (MQ=255) gcgcCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGt < 4:170870/123‑1 (MQ=255) gcgcCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGt > 3:170870/1‑123 (MQ=255) gcgcCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGgccgc > 6:191144/1‑149 (MQ=255) cGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCcgcg < 8:282431/149‑1 (MQ=255) tGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttt < 2:174792/149‑1 (MQ=255) aGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt < 3:349520/149‑1 (MQ=255) aGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt < 7:338738/149‑1 (MQ=255) gCATCGTCGCCGCTTAAACGCGACGTAGCTCCAGAAGCCCCGTCATGCGACCGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTg > 2:262995/1‑149 (MQ=255) gtcgCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAaga < 6:304822/149‑1 (MQ=255) gccgcTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGc < 7:80459/148‑1 (MQ=255) ccgcTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCt > 4:339308/1‑149 (MQ=255) cgcTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCt > 2:166182/1‑148 (MQ=255) cTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTc > 8:244433/1‑130 (MQ=255) cTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTc < 7:244433/130‑1 (MQ=255) cTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCAt < 5:191144/149‑1 (MQ=255) ttAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGc < 8:67224/143‑1 (MQ=255) ttAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGc > 7:67224/1‑143 (MQ=255) aaTCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGtt > 6:319488/1‑149 (MQ=255) gcgACGTCGCTCGAGAAGCCCCGTCTTGCGACGGGGCTTTTTAGTTTGTGGTGAGCCTCTTGCAAATCTGTTTTTCTGTGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGATCATTTTTGCAAGAGCCTCATGttttt < 5:41416/148‑1 (MQ=255) gcgACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTAATGttttt > 5:25424/1‑148 (MQ=255) cgACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGa < 6:25424/149‑1 (MQ=255) gCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCAtt > 7:13185/1‑148 (MQ=255) gCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTc < 3:339308/149‑1 (MQ=255) cAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt > 7:23399/1‑117 (MQ=255) cAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCAttttt < 8:23399/117‑1 (MQ=255) aaaaaGCCCCGTCGCATGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAagag > 3:88002/4‑124 (MQ=255) aaaaaGCCCCGTCGCATGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAagag < 4:88002/121‑1 (MQ=255) aGCCCCGTCGCATGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTc > 3:275595/1‑146 (MQ=255) aGCCCCGTCGCATGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTc < 4:275595/146‑1 (MQ=255) cccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGc < 5:319488/149‑1 (MQ=255) ccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGtt > 4:69353/1‑71 (MQ=255) ccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGtt < 3:69353/71‑1 (MQ=255) ccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGcc > 2:110092/1‑149 (MQ=255) ccGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGATCGTCTGcc > 4:304926/1‑149 (MQ=255) tCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGCcgac < 3:183864/149‑1 (MQ=255) tGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGCcgac > 5:15187/1‑146 (MQ=255) | GCTGGCTACGGCGTTGGCATGGGCAAGGACCACACCTTGTTCGCCAAGATCGAAGGCGTGATCAAGTTCGAGAAGAAAGGCGAGTTCATGCGCCGTTACGTGAGCATCGTCGCCGCTTAATCGCGACGTCGCTCCAGAAGCCCCGTCATGCGACGGGGCTTTTTCGTTTGTGGTGAGCCTCTTGCAAAGCTGTTTGTCTGGGTTGCCGGCGTTGGTTTCTACGGTCGTACGGGGCCGCCGCGCTCATTTTTGCAAGAGCCTCATGTTTTTGAGTCATTCAGCTCGTCTGCCGAC > NC_002947/801208‑801501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |