| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 895,198 | G→C | 5.7% | intergenic (+38/+26) | PP_0777 → / ← PP_0778 | glutathione peroxidase/group 1 family glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 895,198 | 0 | G | C | 5.7% | 274.1 / 3.1 | 83 | intergenic (+38/+26) | PP_0777/PP_0778 | glutathione peroxidase/group 1 family glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (37/41); new base C (2/3); total (39/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
GAAGTTTCTGGTGGGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCT > NC_002947/895055‑895345 | gaAGTTTCTGGTGGGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGc > 7:100697/1‑149 (MQ=255) aGTTTCTGGTGGGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGcc < 5:130320/148‑1 (MQ=255) tggtggGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCgcggg > 5:41410/1‑149 (MQ=255) gtggGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGTTGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCgcgggc < 5:15095/148‑1 (MQ=255) gtggGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCgcgggcg < 6:200288/149‑1 (MQ=255) gtggGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCgcgggcg > 5:386113/1‑149 (MQ=255) gCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGgcgc > 2:210379/1‑149 (MQ=255) cAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCgcgggcgg > 2:247293/1‑145 (MQ=255) cAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCgcgggcgg < 1:247293/145‑1 (MQ=255) cAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCt < 8:100697/149‑1 (MQ=255) aaGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTg > 8:11430/1‑149 (MQ=255) aaGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTg > 2:209375/1‑149 (MQ=255) ggATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGa > 6:55222/1‑149 (MQ=255) gATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGAt < 1:53876/149‑1 (MQ=255) aTGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTTGCAGCGCCTGTGAGATCCAGCGCCGCCCGCGCGGCACTCGAt < 1:257052/149‑1 (MQ=25) gCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTca < 4:11791/149‑1 (MQ=255) cGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTca > 1:19842/1‑147 (MQ=255) cGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGGGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTcaca < 7:347968/149‑1 (MQ=255) cTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCt > 7:291130/1‑149 (MQ=255) cgcgTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCCAGCGCCGCCCGCGCGGCACTCGAt < 5:178334/133‑1 (MQ=38) cgcgTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCCAGCGCCGCCCGCGCGGCACTCGAt > 6:178334/1‑133 (MQ=38) gTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCTGGCGGCGCTGGATCTCACAGGCGCTGCAAACa < 8:117162/149‑1 (MQ=255) gTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACa < 6:386113/149‑1 (MQ=255) cgccgcGCACGGCGCCGGATGACCCAGCGGGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgcg > 1:23001/1‑149 (MQ=255) cgccgcGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgcg < 2:23001/148‑1 (MQ=255) gccgcGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgc < 7:345766/146‑1 (MQ=255) ccgcGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgcgc < 3:204603/147‑1 (MQ=255) ccgcGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgcgc > 4:204603/1‑147 (MQ=255) ggCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCa < 4:176094/149‑1 (MQ=255) gcCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGcc > 5:305872/1‑149 (MQ=255) cGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCg > 8:286639/1‑148 (MQ=255) cGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGt < 1:13827/149‑1 (MQ=255) cGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGt < 6:41410/149‑1 (MQ=255) cGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGt < 8:291130/149‑1 (MQ=255) cccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGgcg > 3:312944/1‑112 (MQ=255) cccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGgcg < 4:312944/112‑1 (MQ=255) cccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCAc > 1:125305/1‑147 (MQ=255) cccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCAc > 7:243449/1‑147 (MQ=255) ccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCGCCTGTGAGATCCAGCGCCGCCCGCGCGGCACTCGATCTCACAggtg > 6:308051/1‑109 (MQ=21) ccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCGCCTGTGAGATCCAGCGCCGCCCGCGCGGCACTCGATCTCACAggtg < 5:308051/111‑3 (MQ=21) ccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGc < 1:40619/115‑1 (MQ=255) ccAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGc > 2:40619/1‑115 (MQ=255) gC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGtt > 3:209740/1‑149 (MQ=255) gtggtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGcc < 5:103208/149‑1 (MQ=255) gtggtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGcc < 7:11430/149‑1 (MQ=255) gtggtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGcc > 6:357022/1‑149 (MQ=255) tggtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCg < 5:55222/149‑1 (MQ=255) gtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCgg > 6:337827/1‑148 (MQ=255) gtgCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGc < 7:286639/149‑1 (MQ=255) gCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGTAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCAt > 1:157517/1‑149 (MQ=255) cAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATg > 4:57267/1‑149 (MQ=255) ggCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATgcg > 6:348010/1‑149 (MQ=255) gCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgcg < 2:39201/110‑1 (MQ=255) gCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTgcg > 1:39201/1‑110 (MQ=255) gCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATgcgc < 1:209375/149‑1 (MQ=255) cATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTg > 1:184042/1‑149 (MQ=255) gagaAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCa < 4:27937/149‑1 (MQ=255) gaAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGTAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGa < 2:157517/149‑1 (MQ=255) aaGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATa > 4:59326/1‑149 (MQ=255) aGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATAc < 2:19842/149‑1 (MQ=255) aGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATAc < 6:305872/149‑1 (MQ=255) gCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATAcc < 5:337827/149‑1 (MQ=255) cccTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATAccc > 4:197830/1‑149 (MQ=255) ccTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGaa < 2:184042/149‑1 (MQ=255) cTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATAc < 5:26745/140‑1 (MQ=255) cTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATAc > 6:26745/1‑140 (MQ=255) cTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAAc > 7:195628/1‑149 (MQ=255) tGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCTCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACt > 2:7364/1‑149 (MQ=255) gAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTg > 1:256611/1‑149 (MQ=255) aaGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGt < 3:57267/149‑1 (MQ=255) agagTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGtt < 2:125305/149‑1 (MQ=255) gagTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTc > 5:186266/1‑149 (MQ=255) cTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAAt < 1:210379/149‑1 (MQ=255) aCGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATc < 7:215937/147‑1 (MQ=255) aCGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATc < 4:209740/147‑1 (MQ=255) cGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCTCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGcc < 1:7364/149‑1 (MQ=255) gTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAg > 5:106582/1‑149 (MQ=255) ggCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTg > 4:350933/1‑149 (MQ=255) tgAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCt < 5:357022/147‑1 (MQ=255) tgAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTgg > 1:188726/1‑149 (MQ=255) agaTCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCa > 5:228746/1‑149 (MQ=255) agaTCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCa < 3:59326/149‑1 (MQ=255) tCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGc < 3:350933/149‑1 (MQ=255) gAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCt < 8:195628/148‑1 (MQ=255) | GAAGTTTCTGGTGGGCAAGGATGGCCGGGTGCTGGCGCGTTTCTCGCCGCGCACGGCGCCGGATGACCCAGC‑GGTGGTGCAGGCCATCGAGAAAGCCCTGGCCTGAAGAGTGCCTGACGTGATGTTT‑TGGCACCTGTGAGATCGAGTGCCGCGCGGGCGGCGCTGGATCTCACAGGCGCTGCAAACATTGCGCAGAACGCCCAGCCGTAGCACCAGGTTGCCGGCATGCGCTGTTCAGATACCCCTCGAACTGTTCGACAATCGCCGGCCAGCCCTGGCGGCTGGCATGCT > NC_002947/895055‑895345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |