| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 924,319 | T→C | 11.1% | T292A (ACG→GCG) | PP_0804 ← | protein secretion ABC transporter permease/ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 924,319 | 0 | T | C | 11.1% | 208.6 / 13.7 | 82 | T292A (ACG→GCG) | PP_0804 | protein secretion ABC transporter permease/ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (34/38); new base C (4/5); total (39/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
CCAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGGCGCGCT > NC_002947/924175‑924465 | ccAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTcgcg < 4:28138/149‑1 (MQ=255) aaCCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGt < 4:211731/149‑1 (MQ=255) aCCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTg > 3:192594/1‑149 (MQ=255) ccGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGc < 4:309543/149‑1 (MQ=255) tGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGCGACGGTGCTgg < 7:105908/149‑1 (MQ=255) ccAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGTCC‑AGCACCGCGACGGTGCTggcc < 2:126659/149‑3 (MQ=255) ccAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGAc < 1:338950/149‑1 (MQ=255) ccAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGAc < 6:319018/149‑1 (MQ=255) ccAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGAc < 3:346489/149‑1 (MQ=255) cAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACg > 5:382837/1‑149 (MQ=255) gcgcCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCGAGGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGt > 1:99202/1‑148 (MQ=255) cTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCCAAGCACCGTCGCGGTGCTGGACGTGATCa < 1:23356/149‑1 (MQ=255) cTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAg < 4:192594/149‑1 (MQ=255) gtgCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTcg > 7:173794/1‑149 (MQ=255) aagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGAt < 8:160393/138‑1 (MQ=255) aagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGAt > 7:160393/1‑138 (MQ=255) aagcaaCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGa < 8:173794/149‑1 (MQ=255) agcaaCCCGCGCAGAACCATGGCCAGCAGCGCGACCAGCC‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGAC‑AGCACCGTCGCGGAGCTCGACGTGATCAGGTCGCGGa > 5:302990/1‑148 (MQ=255) aCCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGAc > 4:369502/1‑149 (MQ=255) cccGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACt > 4:110661/1‑149 (MQ=255) ccGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTc < 7:198778/149‑1 (MQ=255) cGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTc > 2:258108/1‑148 (MQ=255) cGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGCGACGGTGCTgg > 6:309223/1‑123 (MQ=255) cGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGCGACGGTGCTgg < 5:309223/123‑1 (MQ=255) ggCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAg < 4:1272/149‑1 (MQ=255) gcATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCTGTACGCGGCGGATCATCCAGAACTCGATCAGGAACAGCAGGAAGAAGGGCAGGTCGGCC‑AGCAGCGTCGCGGTGCTGGACGTGTTCAGGTCGCGGATCGACTCCAGCTCgcgc < 7:37543/148‑1 (MQ=255) cATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCgcgc > 7:157098/1‑148 (MQ=255) ccAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGc > 3:300352/1‑149 (MQ=255) agcGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGAt < 6:382837/149‑1 (MQ=255) cgACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAAc < 3:110661/149‑1 (MQ=255) cgACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAAc < 3:369502/149‑1 (MQ=255) gACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGTCGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGaa > 3:257843/1‑147 (MQ=255) gACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGTCGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGaa < 4:257843/147‑1 (MQ=255) cAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGCTCAGGTAGCGGATCGACTCCACCAAGCGCAACTGCCACATGAACGAGc > 7:165166/1‑149 (MQ=255) gCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCg > 8:146143/1‑149 (MQ=255) g‑ggATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGt < 8:157098/149‑1 (MQ=255) aaCACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACtt > 8:230880/1‑149 (MQ=255) cacCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTgg < 5:45649/149‑1 (MQ=255) cAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑CGCACCCACGCGGGGCTGGACGTGATAAAGTCGCCGATCGACACCAGCTCGCCCCACTGCGAGATGAACGAGCCCGTGGACTTGGGcc > 4:716/1‑149 (MQ=255) cAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGcc < 4:300352/149‑1 (MQ=255) cAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGcc > 2:305179/1‑149 (MQ=255) gTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCCCCGTTGCGGTGCTGGGCGTGATCAGGTCGCGGCTCGCCTCCAGCTCGCGCAACGGCGAGATGAACGCCCCGGTGGACGTGGGCCGc > 6:18957/1‑149 (MQ=255) ccgccgATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑CCCACCCCCCCGGTGCTGGACCTGATCAGGTCGCGGGGAGACTCCAGCACCCGCCACAGCGAGATGAACGAGCCGGTGGACTTGGGGCGCAcc > 6:46562/1‑147 (MQ=255) gccgATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTAGCGGTGATGGACGTGATCAGGTCGCGGATAGACTCCAGCTCTCGAAACTGCGAGATGAACGAGCCGGTGGACTAGGGCCGCACCGAGt > 1:100775/1‑149 (MQ=255) aTCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcg < 7:230880/149‑1 (MQ=255) tCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACt < 2:57760/129‑1 (MQ=255) tCAGCCAGAACACGAACAGGAACAGCAGGAAGAACAGCAGGTATGCC‑AGCACAGTCGCGGTGATATACGTGATAACGTCGCCGATCGACTCCAGCTCGAGCAACTGCGAGATGAACGAGCAGGTGGACt > 1:57760/1‑129 (MQ=255) gCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTcgc > 5:104913/1‑78 (MQ=255) gCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTcgc < 6:104913/78‑1 (MQ=255) gCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTAGCGGATCGCCTACACCTAGCGCAACTTCGAGATGAAAGAGCCGGTGGACATGGGCCGCCCCGACTTgcgcagg > 8:17590/1‑149 (MQ=255) ccAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGa > 5:310791/1‑138 (MQ=255) ccAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGa < 6:310791/138‑1 (MQ=255) aGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTcgc < 6:369955/93‑1 (MQ=255) cacGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAggg > 8:24927/1‑149 (MQ=255) acGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAggg > 7:95906/1‑148 (MQ=255) cGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCa < 2:99202/149‑1 (MQ=255) acaggaacagCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATgg < 8:95906/149‑1 (MQ=255) aggaacagCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGcc > 7:20149/1‑149 (MQ=255) aggaacagCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGcc < 7:17590/149‑1 (MQ=255) gaacagCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCg > 8:282781/1‑148 (MQ=255) aacagCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTa < 7:24927/149‑1 (MQ=255) aacagCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTa < 7:282781/149‑1 (MQ=255) aacagCAGGAAGAACGGCAGGGCGGCC‑AGCACCGCCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTa < 5:46562/149‑1 (MQ=255) ggagGAAGATCGGCAGGTCGGCC‑TGCACCGTCGCGTTGCTGGAGGTGATCATGTCGCGGATCGACTCCAGCTCGCTCAAGTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGAcc < 2:100775/147‑1 (MQ=255) gaagaaCGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCg < 6:293871/139‑1 (MQ=255) gaagaaCGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCg > 5:293871/1‑139 (MQ=255) agaaCGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCg > 3:106771/1‑149 (MQ=255) aaCGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCt > 7:4680/1‑149 (MQ=255) ggCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCAc < 3:716/149‑1 (MQ=255) gTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgcag < 5:54469/117‑1 (MQ=255) cgtcc‑AGCACCGCGACGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgc < 4:264659/110‑1 (MQ=255) cgtcc‑AGCACCGCGACGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTgcgcaggcgc > 3:264659/4‑113 (MQ=255) tcc‑AGCACCGCGACGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTc > 2:279444/2‑149 (MQ=255) gCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGt > 4:104304/1‑124 (MQ=255) gCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGt < 3:104304/124‑1 (MQ=255) c‑AGCCCCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCg < 6:265517/133‑1 (MQ=255) c‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGt < 8:12927/131‑1 (MQ=255) c‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGt > 7:12927/1‑131 (MQ=255) c‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCg > 5:265517/1‑133 (MQ=255) cACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAgg > 3:46310/1‑142 (MQ=255) cACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAgg < 4:46310/142‑1 (MQ=255) cGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGGCTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGGCGCGCt > 5:348246/1‑149 (MQ=255) | CCAACCGTGCCAGGCGCCTTTGTGCAAGCAACCCGGGCAGCACCATGGCCAGCAGCGCGACCAGCG‑GGATGAACACCAGTACGCCGCCGATCAGCCAGAACACGAACAGGAACAGCAGGAAGAACGGCAGGTCGGCC‑AGCACCGTCGCGGTGCTGGACGTGATCAGGTCGCGGATCGACTCCAGCTCGCGCAACTGCGAGATGAACGAGCCGGTGGACTTGGGCCGCACCGAGTTGCGCAGGCGCAGGGCATGGCCGTAGACCAGGTCGCTCACCCGCAGGTCGGCGCGCT > NC_002947/924175‑924465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |