| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,824 | A→T | 5.5% | H89L (CAC→CTC) ‡ | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,824 | 0 | A | T | 5.5% | 283.6 / 4.5 | 91 | H89L (CAC→CTC) ‡ | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base A (44/42); new base T (2/3); total (46/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGCTG > NC_002947/980678‑980968 | cGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACg > 3:198176/1‑149 (MQ=255) aCGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGAc > 2:1981/1‑149 (MQ=255) cGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGAcc > 4:8605/1‑149 (MQ=255) gCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGGGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGAccc < 8:329037/149‑1 (MQ=255) cGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAAGTCAGGGTCGTGGACCGTGAcctcct < 4:343985/149‑1 (MQ=255) tGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctgg < 7:127370/149‑2 (MQ=255) tGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctgg < 3:189001/149‑2 (MQ=255) gcagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgctg > 2:245933/1‑148 (MQ=255) cagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgctg > 1:190980/1‑147 (MQ=255) agcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag > 3:102224/1‑149 (MQ=255) cgcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCa < 4:38223/148‑1 (MQ=255) tGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTgg > 2:136296/1‑149 (MQ=255) tGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTgg > 7:302878/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCg > 7:346368/1‑149 (MQ=255) aaaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTc < 4:178043/123‑1 (MQ=255) aaaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTc > 3:178043/1‑123 (MQ=255) aaTCCGCGGCCCTGCACGACGCTTACCATACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGTCGTGaa < 8:337910/149‑1 (MQ=255) aaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGaa < 1:273438/149‑1 (MQ=255) aTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAag < 4:198176/149‑1 (MQ=255) cgGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTc < 8:302878/149‑1 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag > 2:65866/1‑122 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag < 1:65866/122‑1 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCg > 3:357868/1‑147 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGAC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCg > 7:274917/1‑147 (MQ=255) tCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaa > 5:241558/1‑146 (MQ=255) tCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaa < 6:241558/146‑1 (MQ=255) aaCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCgaagaa < 8:189550/147‑1 (MQ=255) aaCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAAc < 4:357868/148‑1 (MQ=255) acgacgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTg < 1:1981/149‑1 (MQ=255) acgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCGCATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTg > 1:93662/1‑147 (MQ=255) cgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAg > 4:210054/1‑148 (MQ=255) gCTTACCCGACGCTGCGCAGGGCGCCGCGTCGCGCGCGCTACCTGCGGGC‑CATCTGCGGCCACGAAGTGCCCCCGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGa < 8:346368/149‑1 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 7:245053/1‑148 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 7:249362/1‑148 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATAAGCGGACACGAAGTGCCACATGAGGTCACGGTCCACGAACCTGAATTCCTGCTGCAGCAGATGCTGTGGCGTGAAGAGCTAGAAGAACGTCAGGAt > 8:123250/1‑148 (MQ=255) aCCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg < 1:136296/147‑1 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCt < 1:357234/129‑1 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCt > 2:357234/1‑129 (MQ=255) cAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGc > 1:68487/1‑149 (MQ=255) aGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGcc > 6:2399/1‑149 (MQ=255) gCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctg < 6:164678/94‑1 (MQ=255) gCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctg > 5:164678/1‑94 (MQ=255) gCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGAcc > 8:123481/1‑149 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 8:249362/149‑1 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 8:245053/149‑1 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCGACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGTGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 6:130321/149‑1 (MQ=255) cAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACg < 1:194866/149‑1 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAg > 6:242346/1‑125 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAg < 5:242346/125‑1 (MQ=255) gTCGGGCGCGCTACCTGCTGTC‑CATCTGGGGCAACGAAGTGCCCCTGGAGGTCAGGGTCCACGACCCTTACTTCCTGCTGCAGCAGATGCAGTGGCGTTAAGAGCTCGAAGAACTTTAGGATGAAGACGACCTTGACGGTGTCGGCgtg < 7:58213/149‑1 (MQ=255) gTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCgtg < 2:190980/149‑1 (MQ=255) gcgcgcgcTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTTACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGtt < 4:102224/148‑1 (MQ=255) gcgcgcgcTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGtt < 2:93662/148‑1 (MQ=255) gcgcTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaaga < 3:210054/149‑1 (MQ=255) ccTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGcc > 3:196037/1‑149 (MQ=255) tgctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAag > 1:71410/1‑87 (MQ=255) tgctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAag < 2:71410/87‑1 (MQ=255) tgctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCt > 6:217114/1‑148 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACg > 6:246296/1‑121 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACg < 5:246296/121‑1 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa < 6:29338/149‑1 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa < 3:8605/149‑1 (MQ=255) tgGT‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAg > 4:118049/1‑149 (MQ=255) cATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgccg > 1:16089/1‑149 (MQ=255) aGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCa < 8:274917/149‑1 (MQ=255) aGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCa < 4:312192/149‑1 (MQ=255) gCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAg < 5:217114/149‑1 (MQ=255) ggCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGa < 7:123481/149‑1 (MQ=255) ccACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg < 6:323002/92‑1 (MQ=255) ccACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg > 5:323002/1‑92 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg > 3:103643/1‑94 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg < 4:103643/94‑1 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgcc < 6:313739/138‑1 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgcc > 5:313739/1‑138 (MQ=255) aCGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACg > 8:126253/1‑149 (MQ=255) aaGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCt > 1:42432/1‑148 (MQ=255) ccccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGa < 4:196037/149‑1 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc > 8:363332/1‑95 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 7:363332/95‑1 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg > 4:337843/1‑149 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg > 6:2591/1‑149 (MQ=255) ccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg > 3:293102/1‑148 (MQ=255) cAGGAAGTCAGGGTCGTGGACCGTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGa > 2:63880/1‑149 (MQ=255) cAGGAAGTCAGGGTCGTGGACCGTGACCTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGa > 6:285925/1‑149 (MQ=255) ggaggTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACt < 3:337843/149‑1 (MQ=255) gTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCgtgt < 5:157863/100‑1 (MQ=255) gTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCgtgt > 6:157863/1‑100 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAgcgc > 8:10602/1‑108 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAgcgc < 7:10602/108‑1 (MQ=255) ggTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGgct > 5:60140/1‑149 (MQ=255) gTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGgctg > 2:354044/1‑149 (MQ=255) | CGACGCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGCAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGCTG > NC_002947/980678‑980968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |