| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 980,830 | C→G | 6.8% | P91R (CCT→CGT) | hscB → | DnaJ‑like molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 980,830 | 0 | C | G | 6.8% | 281.4 / 9.5 | 88 | P91R (CCT→CGT) | hscB | DnaJ‑like molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (41/41); new base G (3/3); total (44/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.18e-01 | |||||||||||
GCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGCTGCTGGGAT > NC_002947/980682‑980975 | gCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGGGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGAccc < 8:329037/149‑1 (MQ=255) cGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAAGTCAGGGTCGTGGACCGTGAcctcct < 4:343985/149‑1 (MQ=255) tGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctgg < 7:127370/149‑2 (MQ=255) tGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAAGTCAGGGTCGTGGACCGTGACCTCctgg < 3:189001/149‑2 (MQ=255) gcagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgctg > 2:245933/1‑148 (MQ=255) cagcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctgctg > 1:190980/1‑147 (MQ=255) agcGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag > 3:102224/1‑149 (MQ=255) cgcTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑a < 4:38223/148‑1 (MQ=255) tGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTgg > 7:302878/1‑149 (MQ=255) tGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTgg > 2:136296/1‑149 (MQ=255) gAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCg > 7:346368/1‑149 (MQ=255) aaaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTc < 4:178043/123‑1 (MQ=255) aaaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTc > 3:178043/1‑123 (MQ=255) aaTCCGCGGCCCTGCACGACGCTTACCATACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGTCGTGaa < 8:337910/149‑1 (MQ=255) aaTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGaa < 1:273438/149‑1 (MQ=255) aTCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAag < 4:198176/149‑1 (MQ=255) cgGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTc < 8:302878/149‑1 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag < 1:65866/122‑1 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTgcag > 2:65866/1‑122 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCg > 3:357868/1‑147 (MQ=255) cccTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGAC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCg > 7:274917/1‑147 (MQ=255) tCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCgaa > 5:241558/1‑146 (MQ=255) tCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCgaa < 6:241558/146‑1 (MQ=255) aaCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCgaagaa < 8:189550/147‑1 (MQ=255) aaCGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAAc < 4:357868/148‑1 (MQ=255) acgacgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTg < 1:1981/149‑1 (MQ=255) acgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGCGCATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTg > 1:93662/1‑147 (MQ=255) cgCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAg > 4:210054/1‑148 (MQ=255) gCTTACCCGACGCTGCGCAGGGCGCCGCGTCGCGCGCGCTACCTGCGGGC‑CATCTGCGGCCACGAAGTGCCCCCGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGa < 8:346368/149‑1 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 7:249362/1‑148 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGAt > 7:245053/1‑148 (MQ=255) ttACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATAAGCGGACACGAAGTGCCACATGAGGTCACGGTCCACGAACCTGAATTCCTGCTGCAGCAGATGC‑TGTGGCGTGAAGAGCTAGAAGAACGTCAGGAt > 8:123250/1‑148 (MQ=255) aCCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg < 1:136296/147‑1 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCt > 2:357234/1‑129 (MQ=255) ccAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCt < 1:357234/129‑1 (MQ=255) cAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGc > 1:68487/1‑149 (MQ=255) aGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGcc > 6:2399/1‑149 (MQ=255) gCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctg > 5:164678/1‑94 (MQ=255) gCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCctg < 6:164678/94‑1 (MQ=255) gCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGAcc > 8:123481/1‑149 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 8:249362/149‑1 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 8:245053/149‑1 (MQ=255) gcAGTGCGCCGCGTCGCGCGCGCGACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGTGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 6:130321/149‑1 (MQ=255) cAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACg < 1:194866/149‑1 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAg < 5:242346/125‑1 (MQ=255) cgccgcGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAg > 6:242346/1‑125 (MQ=255) gTCGGGCGCGCTACCTGCTGTC‑CATCTGGGGCAACGAAGTGCCCCTGGAGGTCAGGGTCCACGACCCTTACTTCCTGCTGCAGCAGATGC‑AGTGGCGTTAAGAGCTCGAAGAACTTTAGGATGAAGACGACCTTGACGGTGTCGGCgtg < 7:58213/149‑1 (MQ=255) gTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCgtg < 2:190980/149‑1 (MQ=255) gcgcgcgcTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTTACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGtt < 4:102224/148‑1 (MQ=255) gcgcgcgcTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGtt < 2:93662/148‑1 (MQ=255) gcgcTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCaaga < 3:210054/149‑1 (MQ=255) ccTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGcc > 3:196037/1‑149 (MQ=255) tgctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAag < 2:71410/87‑1 (MQ=255) tgctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAag > 1:71410/1‑87 (MQ=255) tgctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCt > 6:217114/1‑148 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACg < 5:246296/121‑1 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACg > 6:246296/1‑121 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa < 6:29338/149‑1 (MQ=255) ctgGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGaa < 3:8605/149‑1 (MQ=255) tgGT‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAg > 4:118049/1‑149 (MQ=255) cATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgccg > 1:16089/1‑149 (MQ=255) aGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCa < 4:312192/149‑1 (MQ=255) aGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCa < 8:274917/149‑1 (MQ=255) gCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAg < 5:217114/149‑1 (MQ=255) ggCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGa < 7:123481/149‑1 (MQ=255) ccACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg > 5:323002/1‑92 (MQ=255) ccACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATg < 6:323002/92‑1 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg < 4:103643/94‑1 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAg > 3:103643/1‑94 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgcc > 5:313739/1‑138 (MQ=255) cACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGgcc < 6:313739/138‑1 (MQ=255) aCGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACg > 8:126253/1‑149 (MQ=255) aaGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCt > 1:42432/1‑148 (MQ=255) ccccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGa < 4:196037/149‑1 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc > 8:363332/1‑95 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGAc < 7:363332/95‑1 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg > 6:2591/1‑149 (MQ=255) cccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg > 4:337843/1‑149 (MQ=255) ccAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAg > 3:293102/1‑148 (MQ=255) cAGGAAGTCAGGGTCGTGGACCGTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGa > 2:63880/1‑149 (MQ=255) cAGGAAGTCAGGGTCGTGGACCGTGACCTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGa > 6:285925/1‑149 (MQ=255) ggaggTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACt < 3:337843/149‑1 (MQ=255) gTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCgtgt > 6:157863/1‑100 (MQ=255) gTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCgtgt < 5:157863/100‑1 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAgcgc < 7:10602/108‑1 (MQ=255) aCGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAgcgc > 8:10602/1‑108 (MQ=255) ggtcgtggACCGTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGgct > 4:172126/8‑149 (MQ=255) ggTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGgct > 5:60140/1‑149 (MQ=255) gTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGgctg > 2:354044/1‑149 (MQ=255) cccTGACTTCCTGCTGCAGCAGATGCGAGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGCTGCTGGGAt > 1:4662/1‑149 (MQ=255) | GCCTCCGAGCGTGAGCAGCGTATTGCGCTGGAAAAATCCGCGGCCCTCAACGACGCTTACCAGACGCTGCGCAGTGCGCCGCGTCGCGCGCGCTACCTGCTGGC‑CATCAGCGGCCACGAAGTGCCCCAGGAGGTCACGGTCCACGACCCTGACTTCCTGCTGCAGCAGATGC‑AGTGGCGTGAAGAGCTCGAAGAACTGCAGGATGAAGCCGACCTTGACGGTGTCGGCGTGTTCAAGAAGCGCCTGAAGGCCGCCCAGGACACGCTGAATGAGGACTTTGCCGGCTGCTGGGAT > NC_002947/980682‑980975 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |