| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 133,399 | C→G | 5.9% | H59Q (CAC→CAG) | PP_0128 → | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 133,399 | 0 | C | G | 5.9% | 263.9 / 4.6 | 82 | H59Q (CAC→CAG) | PP_0128 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (39/38); new base G (3/2); total (42/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTGGCCCACTTGGGG > NC_002947/133251‑133546 | ttGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGAATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCAc > 4:196510/1‑149 (MQ=255) ccTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACctgc < 6:169403/149‑1 (MQ=255) gCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCtgctgc > 2:73193/1‑149 (MQ=255) cACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGcc > 7:91964/1‑149 (MQ=255) aCGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTAACGCCATTACCTGA‑CCCGTAGCTGGCAGCACCTGCTGCCg > 5:205096/1‑149 (MQ=255) ggTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGc > 7:130863/1‑149 (MQ=255) gTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCg < 1:335373/138‑1 (MQ=255) gTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCGGCTGCCg > 2:335373/1‑138 (MQ=255) tCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGt < 3:362752/149‑1 (MQ=255) tCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGt < 2:191850/149‑1 (MQ=255) aGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGACCGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCgg < 1:73193/149‑1 (MQ=255) cATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCAGGTGCTGcc > 6:176252/1‑128 (MQ=255) cATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCAGGTGCTGcc < 5:176252/128‑1 (MQ=255) tCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAAcc > 8:26883/1‑149 (MQ=255) tCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAAcc > 8:21340/1‑149 (MQ=255) gggCAGGCCCGGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGCGCGTGCCGGTAACCTGc > 8:340235/3‑148 (MQ=255) cTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGc > 2:350630/1‑133 (MQ=255) cTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGc > 2:356396/1‑133 (MQ=255) cTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGc < 1:350630/133‑1 (MQ=255) cTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGc < 1:356396/133‑1 (MQ=255) cAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCag > 6:7352/1‑147 (MQ=255) ccGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑GGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGACGGTAACCTGCAGAAGATCGGCAGGctgctg > 7:246461/1‑149 (MQ=255) gATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGa > 6:94994/1‑149 (MQ=255) cGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCt < 5:119862/110‑1 (MQ=255) cGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCtg < 8:91964/147‑1 (MQ=255) cGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCCCTACCGCCATTACCTGA‑CCCCTAGCTGGCAGCACCTTCTGCCGCATAACGGGCGTGCCGGTAAcca > 6:119862/1‑109 (MQ=255) ctCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGccc < 6:205096/148‑1 (MQ=255) ctCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCt > 3:141644/1‑149 (MQ=255) gTTTCAACATCCAGGTGGGCATCATCACCGAGCGCTACCGCCATTACCTTA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAg < 7:340235/149‑1 (MQ=255) gTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTc < 4:108626/131‑1 (MQ=255) gTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTc > 3:108626/1‑131 (MQ=255) tttCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAg > 6:244386/1‑148 (MQ=255) ttCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAgg > 7:227882/1‑148 (MQ=255) tCAACCTCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAgg > 7:346077/1‑147 (MQ=255) cAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAg > 6:135102/1‑149 (MQ=255) aaCATCCCGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CTCGTCGCTGTCAGCACCTGCTGCCGCATAACGTGCGTGCCGGTAACCTGGAGATGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGc < 6:200529/149‑1 (MQ=255) aaCATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTg < 8:157160/141‑1 (MQ=255) aaCATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTg > 7:157160/1‑141 (MQ=255) aaCATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGc < 8:130863/149‑1 (MQ=255) aCATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAgg < 6:266648/144‑1 (MQ=255) aCATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAgg > 5:266648/1‑144 (MQ=255) aTCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGa < 7:206473/149‑1 (MQ=255) aTCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGa < 5:94994/149‑1 (MQ=255) aTCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGa > 5:69132/1‑149 (MQ=255) aTCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCt > 8:336433/1‑149 (MQ=255) ccGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCg < 5:244386/149‑1 (MQ=255) ccGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCg > 4:356368/1‑149 (MQ=255) ccGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCg < 4:141644/149‑1 (MQ=255) cGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGATGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCgg > 7:46157/1‑149 (MQ=255) gAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCggg < 3:356368/149‑1 (MQ=255) gcTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTAc < 7:26883/149‑1 (MQ=255) gcTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTAc < 7:21340/149‑1 (MQ=255) aCCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCtggtgg > 6:131027/1‑105 (MQ=255) aCCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCtggtgg < 5:131027/105‑1 (MQ=255) cGCCTTAACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCAGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCaa > 2:112531/1‑149 (MQ=255) cGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCa > 8:159496/1‑127 (MQ=255) cGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCa < 7:159496/127‑1 (MQ=255) gCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAAc < 5:7352/149‑1 (MQ=255) ccATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGAc > 1:319644/1‑94 (MQ=255) ccATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGAc < 2:319644/94‑1 (MQ=255) ccATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAAc > 5:8794/1‑148 (MQ=255) cATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCa < 8:346077/149‑1 (MQ=255) aTTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAg < 5:135102/149‑1 (MQ=255) aTTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAg < 8:246461/149‑1 (MQ=255) aTTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCACATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAg > 5:180990/1‑149 (MQ=255) ttACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAgg > 3:289061/1‑149 (MQ=255) aCCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGGCCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGt < 8:39988/148‑1 (MQ=255) cTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACgg > 4:183335/1‑38 (MQ=255) cTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACgg < 3:183335/38‑1 (MQ=255) cTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCg > 3:333586/1‑148 (MQ=255) tGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGCAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGaa > 6:79508/1‑149 (MQ=255) gcgTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCtggtgg < 1:254476/89‑1 (MQ=255) gcgTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCtggtgg > 2:254476/1‑89 (MQ=255) tAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTgg < 1:362684/149‑1 (MQ=255) tAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTgg < 8:46157/149‑1 (MQ=255) gCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTggtt > 8:107406/1‑147 (MQ=255) gcggCAGCAGGTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGc < 2:147938/53‑1 (MQ=255) gcggCAGCAGGTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGc > 1:147938/3‑55 (MQ=38) cTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTggttg < 7:107406/149‑4 (MQ=255) cggCAGCAGGTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTGGCCCa > 2:38400/2‑149 (MQ=255) agcaCCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTGGcc < 8:108129/143‑1 (MQ=255) agcaCCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTGGcc > 7:108129/1‑143 (MQ=255) aCCTGCTGCCACATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTGGCCCACTTgggg < 6:180990/149‑1 (MQ=255) | TTGGCCTGCACGAGCCGCAGGTCAACGAGCATCACCTGCAGGCCCCGGGCCTGCCCGAGGATGGCCGTCTGCGGCTGCTCAGTTTCAACATCCAGGTGGGCATCAGCACCGAGCGCTACCGCCATTACCTGA‑CGCGTAGCTGGCAGCACCTGCTGCCGCATAACGGGCGTGCCGGTAACCTGCAGAAGATCGGCAGGCTGCTGGGCGACTTCGACCTGGTGGCCCTGCAGGAAGCCGATGGTGGCAGCCTGCGCTCGGGCTACGTCAACCAGGTCGAACACCTGGCCCACTTGGGG > NC_002947/133251‑133546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |