| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,066,338 | T→C | 5.0% | S88G (AGC→GGC) | PP_0924 ← | hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,066,338 | 0 | T | C | 5.0% | 242.8 / 2.0 | 79 | S88G (AGC→GGC) | PP_0924 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (36/39); new base C (2/2); total (38/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
AGTTCGCCCCAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCACCTTTGAGCTTGGCCTTGAATTCT > NC_002947/1066193‑1066480 | aGTTCGCCCCAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTggc > 6:142464/1‑149 (MQ=255)aGTTCGCCCCAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTggc > 7:332330/1‑149 (MQ=255) gTTCGCCCCAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTggcg < 5:202273/149‑1 (MQ=255) gCCCCAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCt > 3:149645/1‑149 (MQ=255) ccccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTg < 1:145824/149‑1 (MQ=255) ccccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTg > 1:69547/1‑149 (MQ=255) ccccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTg < 5:142464/149‑1 (MQ=255) cccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTgg < 8:332330/149‑1 (MQ=255) cccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTgg < 4:70505/149‑1 (MQ=255) cccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGAGACTCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTgg > 6:366759/1‑149 (MQ=255) ccAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCCGCCAGCAGCCTggg < 7:320508/149‑2 (MQ=255) aGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATc > 3:243208/1‑149 (MQ=255) cACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGTCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGTTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGa < 8:130343/149‑1 (MQ=255) cACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGa < 2:69547/149‑1 (MQ=255) aCGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCACAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAg > 7:359770/1‑149 (MQ=255) cGGCGATTTTACCGCCGTTTCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGTATCTGGCCTTGCAGCTGCAACAGGTCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGTCCCAGGCTGCTGGCGGCCTGGTGATCGAGc < 7:239741/149‑1 (MQ=255) ggCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGGCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGGGGCCTGGTGATCGAGCa < 4:156171/149‑1 (MQ=255) tGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCgg < 4:149645/149‑1 (MQ=255) tACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGggtg < 5:359526/149‑1 (MQ=255) ccgccgTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGggtggt > 2:357832/1‑149 (MQ=255) ccgccgTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGggtggt < 2:252859/149‑1 (MQ=255) ttGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAAc < 2:25960/149‑1 (MQ=255) ggTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGt > 3:71335/1‑149 (MQ=255) gggggCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCgg > 4:121382/1‑149 (MQ=255) gggCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTg < 8:134097/149‑1 (MQ=255) gCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCt > 6:377263/1‑149 (MQ=255) cGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCt > 5:86540/1‑148 (MQ=255) aCGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAg < 5:377263/149‑1 (MQ=255) gCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTg > 3:204930/1‑102 (MQ=255) gCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTg < 4:204930/102‑1 (MQ=255) aGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTcg > 3:131579/1‑149 (MQ=255) tgTACGGCCCAGTTCGCTGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCGGAATTCTTCTTCTCTGTAGAAACGGCCCAGTCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTTGTGGCAACCAGTTCTCCGGTGCTCAGGTcgc < 8:359770/148‑1 (MQ=255) aCGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGACAACCAGTTCGCCGGTGCTCAGGTCGCGTa > 1:189970/1‑149 (MQ=255) cccAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGc > 5:68781/1‑102 (MQ=255) cccAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGc < 6:68781/102‑1 (MQ=255) cccAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGAGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTacac > 5:386350/1‑148 (MQ=255) ccAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAAc > 4:226879/1‑118 (MQ=255) ccAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAAc < 3:226879/118‑1 (MQ=255) aGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAAt < 5:366759/149‑1 (MQ=255) ttCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAAtgt > 5:374920/1‑149 (MQ=255) gAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTggcggc > 2:303931/1‑81 (MQ=255) ggATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTggcgg < 7:203030/149‑1 (MQ=255) ggATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGGGGGGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTggcgg < 2:374145/149‑1 (MQ=255) aactgggCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTggcggc < 8:207965/145‑1 (MQ=255) tCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGATCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAg > 5:8001/1‑149 (MQ=255) ggCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTg > 3:112131/1‑148 (MQ=255) gCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCAcgtcg > 7:34826/1‑149 (MQ=255) gCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCAcgt < 6:86540/147‑1 (MQ=255) cAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCa > 2:250409/1‑149 (MQ=255) aGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAgtcgt > 2:280645/1‑145 (MQ=255) aGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAgtcgt < 1:280645/145‑1 (MQ=255) aGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCAt < 4:131579/149‑1 (MQ=255) ggCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGGTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATg > 6:324748/1‑149 (MQ=255) ggCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATg > 6:169501/1‑149 (MQ=255) ccGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTc < 3:121382/149‑1 (MQ=255) gTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCa < 4:112131/149‑1 (MQ=255) tGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAg < 8:40037/149‑1 (MQ=255) tGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAg < 5:169501/149‑1 (MQ=255) cAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAgg < 6:374920/148‑1 (MQ=255) cAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAgg < 4:71335/148‑1 (MQ=255) gCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCAcgt > 3:306122/1‑125 (MQ=255) gCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCAcgt < 4:306122/125‑1 (MQ=255) tGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCg < 3:353921/83‑1 (MQ=255) tGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCg > 4:353921/1‑83 (MQ=255) aTTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCg > 7:8366/1‑149 (MQ=255) ttcttcttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACTTCGTAGTCGTCCATGTCCAGGCCCTGCTCgg < 1:357832/149‑1 (MQ=255) cttcttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGcc < 2:208636/139‑1 (MQ=255) cttcttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGcc > 1:208636/1‑139 (MQ=255) ttcttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTg > 4:281063/1‑79 (MQ=255) ttcttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTcc > 3:209384/1‑127 (MQ=255) ttcttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTcc < 4:209384/127‑1 (MQ=255) ttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGc > 2:9489/1‑60 (MQ=255) ttcGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGc < 1:9489/60‑1 (MQ=255) cGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCACCttt > 3:38399/1‑148 (MQ=255) gCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCACCttg > 8:250502/1‑146 (MQ=255) tcaccAGGCCGCCAGCAGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAgtcgt < 4:184149/105‑1 (MQ=255) tcaccAGGCCGCCAGCAGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAgtcgt > 3:184149/4‑108 (MQ=255) tcaccAGGCCGCCAGCAGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCACCTTTGAGCTTGGCCtt > 8:242875/4‑148 (MQ=255) ggCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGACAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCACCTTTGAGCTTGGCCTTGAATTCt < 2:189970/149‑1 (MQ=255) gctgctGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCAt > 4:159496/1‑105 (MQ=255) gctgctGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCAt < 3:159496/105‑1 (MQ=255) tgGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCAc > 8:337330/1‑120 (MQ=255) tgGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCAc < 7:337330/120‑1 (MQ=255) | AGTTCGCCCCAAAGCACGGCGATGGTACCGCCGTTGCGGTAGTCGGGGGCGACGCAGGTACGGCCCAGTTCGAGGATCGGGCCTTGCAGCTGCAACAGGCCGTGCAGGCTGAATTCTTCTTCGCTGTAGAAACGGCCCAGGCTGCTGGCGGCCTGGTGATCGAGCAGGCGGGTGGTGGCAACCAGTTCGCCGGTGCTCAGGTCGCGTACACCAATGTGGCGGCAGTGCACGTCGTAGTCGTCCATGTCCAGGCCCTGCTCGGCACCTTTGAGCTTGGCCTTGAATTCT > NC_002947/1066193‑1066480 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |