| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,332 | C→A | 5.1% | R17R (CGG→CGT) | trmE ← | GTPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,332 | 0 | C | A | 5.1% | 316.7 / 4.0 | 97 | R17R (CGG→CGT) | trmE | GTPase |
| Reads supporting (aligned to +/- strand): ref base C (49/43); new base A (3/2); total (52/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
ACAGAGCAATCCCTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGC > NC_002947/6184‑6479 | aCAGAGCAATCCCTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGccc > 5:48230/1‑149 (MQ=255) tCCCTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTgg > 2:244139/1‑149 (MQ=255) tCCCTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTgg < 2:85355/149‑1 (MQ=255) tCCCTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTgg < 7:2517/149‑1 (MQ=255) ccTTCTTCCAGCACCAGCCCGTCATCGTCGCGGAATGGACCGTAATGGGCATGACGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTggg < 8:349354/148‑1 (MQ=255) ccTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGc > 7:349519/1‑149 (MQ=255) gTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTg < 2:163576/148‑1 (MQ=255) tCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGc > 3:68219/1‑143 (MQ=255) tCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGc < 4:68219/143‑1 (MQ=255) cAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACATCGCCACGGCCCAGGGCCGGGGCgg > 2:351183/1‑148 (MQ=255) cAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑a > 2:200774/1‑149 (MQ=255) ccAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATggcg < 1:58800/149‑1 (MQ=255) aGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCACAGGGCCGGACAACCTGACAATTCCCACATCGCCACGGCCCAGGGCCGGGGCG‑GTgtggga < 1:351183/149‑6 (MQ=255) ttCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGc < 6:276478/135‑1 (MQ=255) ttCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGc > 5:276478/1‑135 (MQ=255) ttCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATgg > 8:249247/1‑149 (MQ=255) gtcgCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCa < 6:48230/148‑1 (MQ=255) gcgGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGca < 4:35957/149‑1 (MQ=255) tGGACGGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGGCGGCCTTGGCAGCCAGAGGGGCGGACAACCTGACAATTCCCACTCCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAgtg < 5:380106/148‑1 (MQ=255) tGGACCGTAATGGGCATGCCGCGGGGTCAGGGTCCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAAATCCCACACCGCCCCGCCCCTGGGCCCTGGCG‑ATGGCCGCGATGGTTTAACGCACAgtg > 6:380106/1‑148 (MQ=255) gACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGc < 1:357334/118‑1 (MQ=255) gACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGc > 2:357334/1‑118 (MQ=255) aCCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACACCCTGACAATTCCCACACCGCTCCGGCCCTGGGCCGTGGCG‑a > 8:122598/1‑119 (MQ=255) ccGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCAt > 7:225973/1‑149 (MQ=255) ccGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCAt > 8:77428/1‑149 (MQ=255) gTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGc < 5:218125/149‑1 (MQ=255) tAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTGCATGCt > 6:66759/1‑149 (MQ=255) aTGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGcc > 7:159700/1‑149 (MQ=255) gCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCctc > 2:89778/1‑149 (MQ=255) gCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGGGTTAATGCTAGAAAGCct > 6:265043/1‑148 (MQ=255) ccGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCctc > 2:29963/1‑148 (MQ=255) cgcgGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGaaa < 8:261215/142‑1 (MQ=255) cgcgGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGaaa > 7:261215/1‑142 (MQ=255) cgGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGTATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTAc < 1:89778/149‑1 (MQ=255) gTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGcaca > 5:85255/1‑120 (MQ=255) gTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGcaca < 6:85255/120‑1 (MQ=255) gTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACaa < 1:244139/149‑1 (MQ=255) tCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATg < 6:286624/128‑1 (MQ=255) tCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATg > 5:286624/1‑128 (MQ=255) aGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATg < 8:279679/105‑1 (MQ=255) aGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATg > 7:279679/1‑105 (MQ=255) aGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCACGGCCCAGGGCCGGGGCG‑GTgt > 6:366961/1‑96 (MQ=38) aGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCACGGCCCAGGGCCGGGGCG‑GTgt < 5:366961/97‑2 (MQ=38) gTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCct < 6:211806/134‑1 (MQ=255) gTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCct > 5:211806/1‑134 (MQ=255) gTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGa < 1:375241/149‑1 (MQ=255) tGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGAc < 8:159700/149‑1 (MQ=255) gCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACa < 8:349519/149‑1 (MQ=255) gTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCTGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGc > 2:178002/1‑148 (MQ=255) gATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCaa > 4:297194/1‑148 (MQ=255) aaCAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACg > 3:333581/1‑149 (MQ=255) aaCAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCCATGGTTTCACGTACAGTGTTCATGCTCGAAAGCCTCTACGAAAAAAACGACAGAAACCAAAAACg > 6:345657/1‑149 (MQ=255) aCAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGc < 6:16532/149‑1 (MQ=255) aGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGccc < 8:225973/149‑1 (MQ=255) gccggccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTTGCG‑ATGGCGGCGATGGTTTCACGCACAgtgt < 1:247271/98‑1 (MQ=255) gccggccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTTGCG‑ATGGCGGCGATGGTTTCACGCACAgtgt > 2:247271/1‑98 (MQ=255) gccggccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCa > 3:280251/1‑149 (MQ=255) gccggccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCa > 5:37084/1‑149 (MQ=255) gccggccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCa > 4:315827/1‑149 (MQ=255) gccggccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTAATGCTCGAAAGCCTCGACGACAAAAACGACAGATAGCAAAAACGCCCCa > 1:241299/1‑149 (MQ=255) cagccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCAc > 3:181726/3‑148 (MQ=255) ccAGAGGGCCGGACAACCTGACAATTCCCACCCCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGtttt < 5:66759/149‑1 (MQ=255) ccAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGccc < 1:218239/133‑1 (MQ=255) ccAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGccc > 2:218239/1‑133 (MQ=255) ccAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGtttt > 2:329517/1‑149 (MQ=255) atatggCCGGACAAACTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACATTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATACCAAAAACGCCCCACTAGGGGGCGtttttt < 4:181726/145‑1 (MQ=255) gggCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCTCAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTAtt < 1:200774/149‑1 (MQ=255) ggCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCa > 5:83988/1‑129 (MQ=255) ggCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCa < 6:83988/129‑1 (MQ=255) ccGGACAACCTGACAATTCCCACACCGCCCCGGCCCAGGGCCGTGGCG‑ATGGCGGCGATCGTTTCACGCACACTGTTCATGCTCGAAAGCCTCAACGACAAAAACGACAGATAGAAAAAACGCCCCACTAGGGGGCGTTTTTTAttaa > 5:64372/1‑146 (MQ=255) ggACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAg < 1:29963/149‑1 (MQ=255) gcAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGc > 5:346620/2‑149 (MQ=255) aaCCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTa < 7:249247/149‑1 (MQ=255) ccTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCa > 8:170584/1‑58 (MQ=255) ccTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCa < 7:170584/58‑1 (MQ=255) ccTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGc > 4:93600/1‑149 (MQ=255) cTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCg > 4:108720/1‑149 (MQ=255) cTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCg > 1:42971/1‑149 (MQ=255) tGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGcc < 6:71269/114‑1 (MQ=255) tGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGcc > 5:71269/1‑114 (MQ=255) tGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCg > 5:227810/1‑148 (MQ=255) tGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGt > 7:225539/1‑149 (MQ=255) aCAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGt < 5:265043/147‑1 (MQ=255) ttCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGc < 8:225539/149‑1 (MQ=255) ccACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGccc < 4:280251/148‑1 (MQ=255) ccACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCg > 8:71309/1‑149 (MQ=255) cacaCCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGt > 1:230607/1‑149 (MQ=255) cacaCCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGt < 6:227810/149‑1 (MQ=255) ccatcGCCACGGCCCAGGGCCGGGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGt > 1:139302/5‑148 (MQ=255) acCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTc > 2:62228/1‑147 (MQ=255) tcGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTa > 2:278050/2‑139 (MQ=255) tcGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTa < 1:278050/138‑1 (MQ=255) ccGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTa < 5:282752/106‑1 (MQ=255) ccGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTa > 6:282752/1‑106 (MQ=255) ccGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGt < 1:112214/135‑1 (MQ=255) ccGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGt > 2:112214/1‑135 (MQ=255) ccGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAag < 1:329517/149‑1 (MQ=255) ccGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAag < 3:93600/149‑1 (MQ=255) ccccGGCCCTGGGCTGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagcag < 1:178002/149‑1 (MQ=255) cccGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagcagc < 6:37084/149‑1 (MQ=255) | ACAGAGCAATCCCTTCGTCCAGCACCAGCCCTTCATCGTCGCGGAATGGACCGTAATGGGCATGCCGCGGGGTCAGGGTGCGGCCGGTGATCAACAGGCCGGCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCG‑ATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAGGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGC > NC_002947/6184‑6479 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |