| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 155,543 | G→T | 10.0% | intergenic (‑248/+35) | yjbB ← / ← ygdQ | Na+/Pi‑cotransporter/transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 155,543 | 0 | G | T | 10.0% | 231.7 / 12.7 | 79 | intergenic (‑248/+35) | yjbB/ygdQ | Na+/Pi‑cotransporter/transport protein |
| Reads supporting (aligned to +/- strand): ref base G (31/40); new base T (3/5); total (34/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.52e-01 | |||||||||||
AGCTGTCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGC > NC_002947/155396‑155683 | aGCTGTCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGc > 1:358727/1‑149 (MQ=255) tCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGTAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGaa < 5:95322/147‑1 (MQ=255) tCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGaa < 3:253195/147‑1 (MQ=255) tCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGaa < 3:71177/147‑1 (MQ=255) tCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGaa < 5:317529/147‑1 (MQ=255) ccAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGcc > 5:226873/1‑149 (MQ=255) cAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGccc < 5:251781/149‑1 (MQ=255) gCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCtt < 3:135920/149‑1 (MQ=255) cTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttg > 3:215048/1‑149 (MQ=255) cTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttg < 6:226873/149‑1 (MQ=255) cTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttg < 8:176913/149‑1 (MQ=255) ttCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGTCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgt > 4:105630/1‑149 (MQ=255) ttCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtt < 2:15270/147‑1 (MQ=255) ttCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtt > 1:15270/1‑147 (MQ=255) ttCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgt > 8:349811/1‑149 (MQ=255) cgcgTGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCttttt < 6:257673/148‑1 (MQ=255) cGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGTAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCGCttgtt < 2:129034/148‑1 (MQ=255) cGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgtt < 4:215048/148‑1 (MQ=255) gCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgttg < 1:24205/148‑1 (MQ=255) cATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGCAGCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtttttaa < 1:298618/149‑3 (MQ=255) cATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTtgtg > 6:61584/1‑149 (MQ=255) aTGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc < 7:50846/149‑1 (MQ=255) aTGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc < 3:168067/149‑1 (MQ=255) gCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAACAGGGCCCTGCGAAGGGCCCTTGTTGtgctg < 7:269878/148‑1 (MQ=255) gCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACCGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgctg < 3:320207/148‑1 (MQ=255) tttatttGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCt > 5:104307/1‑149 (MQ=255) tttGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCTGGCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTgg > 1:73460/1‑149 (MQ=255) tttGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtttttaat > 3:175507/1‑131 (MQ=255) tttGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtttttaat < 4:175507/134‑4 (MQ=255) ttGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGcc > 5:108127/1‑149 (MQ=255) tGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCt > 7:253074/1‑149 (MQ=255) gAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCt > 7:129777/1‑148 (MQ=255) aaaCAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTa > 7:272122/1‑149 (MQ=255) aaCAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTAt < 3:363737/149‑1 (MQ=255) aCAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtttttaatgcc > 6:49440/1‑125 (MQ=255) aCAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGCCCtttttaatgcc < 5:49440/131‑7 (MQ=255) aGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGa < 8:253074/149‑1 (MQ=255) cTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGc < 3:314543/137‑1 (MQ=255) cTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGc > 4:314543/1‑137 (MQ=255) tGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCgg > 5:241619/1‑148 (MQ=255) tGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCgg > 2:287025/1‑148 (MQ=255) cGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTc > 8:332312/1‑149 (MQ=255) aTGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCtt < 6:241619/149‑1 (MQ=255) aTGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCtt < 6:108127/149‑1 (MQ=255) aCTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGTAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTgc < 4:232998/148‑1 (MQ=255) gggggCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCAc < 4:119421/149‑1 (MQ=255) ggggCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCGTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCAcc < 2:358727/149‑1 (MQ=255) ggCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCAc < 6:247488/146‑1 (MQ=255) ggCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCAc > 5:247488/1‑146 (MQ=255) t‑gctTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGtt > 5:3363/1‑148 (MQ=255) gctTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttg < 2:274639/88‑1 (MQ=255) ctTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCa < 6:3363/148‑1 (MQ=255) ctTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCAt > 8:182121/1‑149 (MQ=255) tCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGAGCAGTTTCACCGGTTCATGa > 3:205149/1‑149 (MQ=255) gCAAGTCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTg < 3:105630/149‑1 (MQ=255) gCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgttg < 2:372359/82‑1 (MQ=255) gCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTg < 7:332312/149‑1 (MQ=255) caGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGTCCCGGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCg < 8:293742/149‑1 (MQ=255) caGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCg > 5:297583/1‑149 (MQ=255) tctGACAACGC‑GCAGGAAAAAACGCACATAAAAAAGGCTTTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTTACCGGTATTGTCCTTGTGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCg < 1:259612/146‑1 (MQ=255) aGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCgg < 5:61584/149‑1 (MQ=255) aCAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCg > 2:259612/1‑144 (MQ=255) aGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTgc > 5:357193/1‑149 (MQ=255) ggAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTgc < 1:183688/148‑1 (MQ=255) ggAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTgc > 2:183688/1‑148 (MQ=255) aaaaaCGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACACGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCAt > 1:155965/1‑149 (MQ=255) aaCGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTACATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCg > 2:60664/1‑149 (MQ=255) acaGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGt > 7:133666/1‑149 (MQ=255) aGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGCTCCTTGCCCTCCTTGCGGGCCCTGGCGGTGCGCAGGCGGATGtt > 4:290324/1‑148 (MQ=255) aaaaaaGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGAt < 2:171126/149‑1 (MQ=255) ggCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTc < 6:297583/149‑1 (MQ=255) gCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTcc < 2:73460/149‑1 (MQ=255) tAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTCCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCg > 3:176502/1‑149 (MQ=255) aaaGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGtt < 5:376467/132‑1 (MQ=255) aaaGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGtt > 6:376467/1‑132 (MQ=255) aaaGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTCGCGGGCCATGGCGGTGCGCATGCGGATGtt < 5:267852/132‑1 (MQ=255) aaaGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTAGCGGGCCATGGCGGTGCGCATGCGGATGtt > 6:267852/1‑132 (MQ=255) cagtgCCCTGGGAAGGGGCCTTGTTGTGGTGCACTTCCTTGGAATTATTGACCCGTAATGTCCTTGCGCAGTATCACCGGTTCATGATCGTTGCCATCCTTGCGGGCCATTCCGGTGCGCATGCGGATTTTGATGGCTTCCACCGCCAg < 4:27827/145‑1 (MQ=255) aGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGc < 6:357193/149‑1 (MQ=255) | AGCTGTCGCCAGCTTCGCATGGCAGTCATTTATTTGAAACAGATCTTGAAACGAATGACTGCCCGTGGGGGCT‑GCTTCGCGGGCAAGCCACCACAGTGACAACGC‑GCAGGAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGC > NC_002947/155396‑155683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |