Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,160,444 C→G 14.3% L86V (CTG→GTG) ‡ gtsC → mannose/glucose ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,160,4440CG14.3% 168.5 / 17.5 63L86V (CTG→GTG) ‡gtsCmannose/glucose ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base C (27/27);  new base G (6/3);  total (33/30)
Fisher's exact test for biased strand distribution p-value = 4.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.13e-01

CTGACCAGCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCGG  >  NC_002947/1160297‑1160589
                                                                                                                                                   |                                                                                                                                                 
ctgACCAGCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGc                                                                                                                                                   <  4:243773/148‑1 (MQ=255)
     cAGCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGAtct                                                                                                                                             >  3:199969/1‑149 (MQ=255)
       gCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGAtctc                                                                                                                                            >  3:235789/1‑148 (MQ=255)
         ttCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCAc                                                                                                                                         >  7:112488/1‑149 (MQ=255)
                gccccGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCTGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGGAGATCAGCACcgcggg                                                                                                                                   <  6:122183/147‑3 (MQ=255)
                cccccGAAGACATCACCACCGGCAACCTGCTGAGCTGGCTTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGAtt                                                                                                                                  <  2:21763/149‑1 (MQ=255)
                cccccGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGGAGATCAGCACcgcgggc                                                                                                                                  <  1:358496/149‑4 (MQ=255)
                     gAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGc                                                                                                                             <  1:41539/149‑1 (MQ=255)
                       aGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGTTTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCAc                                                                                                                           <  2:357092/149‑1 (MQ=255)
                             caccacCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTg                                                                                                                              <  3:336461/140‑1 (MQ=255)
                                caccGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGc                                                                                                                   >  1:220419/1‑148 (MQ=255)
                                caccGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGc                                                                                                                   >  6:110550/1‑148 (MQ=255)
                                    ggCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGACCGGCTAtgt                                                                                                              >  6:248804/1‑149 (MQ=255)
                                    ggCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTAtgt                                                                                                              <  8:112488/149‑1 (MQ=255)
                                     gCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTAtgtg                                                                                                             <  2:11384/149‑1 (MQ=255)
                                                aGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGAtgtg                                                                                                  >  4:71960/1‑149 (MQ=255)
                                                  cTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                 <  3:71960/148‑1 (MQ=255)
                                                  cTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGgc                                                                                                >  5:124090/1‑149 (MQ=255)
                                                           aGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                 >  2:277017/1‑139 (MQ=255)
                                                           aGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                 <  1:277017/139‑1 (MQ=255)
                                                               aTTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGgc                                                                                                >  7:351542/1‑136 (MQ=255)
                                                               aTTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGgc                                                                                                <  8:351542/136‑1 (MQ=255)
                                                                ttACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCg                                                                                  >  5:25661/1‑149 (MQ=255)
                                                                    cGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCa                                                                                                                            <  4:198820/103‑1 (MQ=255)
                                                                    cGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAAc                                                                              <  5:110550/149‑1 (MQ=255)
                                                                    cGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGACGTGGCGCTTCCGAGGTTCGCAAc                                                                              >  5:229219/1‑149 (MQ=255)
                                                                      gCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTg                                                                            >  3:97766/1‑149 (MQ=255)
                                                                      gCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTg                                                                            >  1:37705/1‑149 (MQ=255)
                                                                             cTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCg                                                                     <  3:268809/149‑1 (MQ=255)
                                                                             cTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCg                                                                     <  4:97766/149‑1 (MQ=255)
                                                                              tGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCg                                                                     >  4:268809/1‑148 (MQ=255)
                                                                                ggTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGACGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCgg                                                                    <  6:229219/147‑1 (MQ=255)
                                                                                     aGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGAtgt                                                                                                   >  4:312618/1‑111 (MQ=255)
                                                                                     aGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGAtgt                                                                                                   <  3:312618/111‑1 (MQ=255)
                                                                                            gggAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGtt                                                        <  8:31593/147‑1 (MQ=255)
                                                                                            gggAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTc                                                       <  2:220419/148‑1 (MQ=255)
                                                                                              gAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                 >  7:357970/1‑104 (MQ=255)
                                                                                              gAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                 <  8:357970/104‑1 (MQ=255)
                                                                                                 cGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGt                                                 >  4:13589/1‑149 (MQ=255)
                                                                                                      aGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCt                                            <  3:13589/149‑1 (MQ=255)
                                                                                                      aGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCt                                            <  4:199969/149‑1 (MQ=255)
                                                                                                       gCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCctgc                                                               <  8:358509/129‑1 (MQ=255)
                                                                                                       gCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCctgc                                                               >  7:358509/1‑129 (MQ=255)
                                                                                                             aCTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCa                                                                                                                            >  6:153106/1‑62 (MQ=255)
                                                                                                             aCTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCa                                                                                                                            <  5:153106/62‑1 (MQ=255)
                                                                                                              cTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTc                                     >  3:176970/1‑148 (MQ=255)
                                                                                                               ttCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTc                                     >  6:244738/1‑147 (MQ=255)
                                                                                                                 cTGGATCTCGATCATGATCACCTTGCCCGCGTTGCTGATCTCCTGCGCTATTGGTGCACTGAACGGCTATGTGCTGTCGATTTGGCGCTTCCGAGGTTCTCAAGTTTTCTTCGGCCTGCTTCTGTTCGGCTGTTTCCTGCCGTTc                                     <  8:305364/145‑1 (MQ=255)
                                                                                                                 cTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGtt                                                <  7:75430/134‑1 (MQ=255)
                                                                                                                 cTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGtt                                                >  8:75430/1‑134 (MQ=255)
                                                                                                                 cTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTAGGCTGTTTCCTGCCGTTGCAg                                  >  7:305364/1‑148 (MQ=255)
                                                                                                                  tGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTc                                              <  7:298873/135‑1 (MQ=255)
                                                                                                                  tGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTc                                              >  8:298873/1‑135 (MQ=255)
                                                                                                                          gATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGtgctgc                        >  8:128780/1‑149 (MQ=255)
                                                                                                                                 aTCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGc                 <  4:235789/149‑1 (MQ=255)
                                                                                                                                     caccaatcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGc                 <  4:164950/138‑1 (MQ=255)
                                                                                                                                     caccaatcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGc                 >  3:164950/8‑145 (MQ=255)
                                                                                                                                       gTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGtt           <  5:244738/149‑1 (MQ=255)
                                                                                                                                         aatcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCa         >  7:96736/4‑149 (MQ=255)
                                                                                                                                          atcgcgGTGGAGATCAGCACCGCGGTTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCAc        >  7:43034/3‑149 (MQ=255)
                                                                                                                                           tcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCAcc       >  2:358943/2‑149 (MQ=255)
                                                                                                                                           tcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCAcc       >  1:229872/2‑149 (MQ=255)
                                                                                                                                             gcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGATGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCt     >  4:93839/1‑149 (MQ=255)
                                                                                                                                                gTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCgg  >  6:199211/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                 
CTGACCAGCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCGG  >  NC_002947/1160297‑1160589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: