Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,160,451 C→G 14.3% S88C (TCC→TGC) ‡ gtsC → mannose/glucose ABC transporter permease

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,160,4510CG14.3% 168.6 / 16.2 62S88C (TCC→TGC) ‡gtsCmannose/glucose ABC transporter permease
Reads supporting (aligned to +/- strand):  ref base C (26/27);  new base G (6/3);  total (32/30)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.67e-01

GCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCGGCAAG  >  NC_002947/1160304‑1160593
                                                                                                                                                   |                                                                                                                                              
gCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGAtctc                                                                                                                                                >  3:235789/1‑148 (MQ=255)
  ttCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCAc                                                                                                                                             >  7:112488/1‑149 (MQ=255)
         gccccGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCTGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGGAGATCAGCACcgcggg                                                                                                                                       <  6:122183/147‑3 (MQ=255)
         cccccGAAGACATCACCACCGGCAACCTGCTGAGCTGGCTTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGAtt                                                                                                                                      <  2:21763/149‑1 (MQ=255)
         cccccGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGGAGATCAGCACcgcgggc                                                                                                                                      <  1:358496/149‑4 (MQ=255)
              gAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGc                                                                                                                                 <  1:41539/149‑1 (MQ=255)
                aGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGTTTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCAc                                                                                                                               <  2:357092/149‑1 (MQ=255)
                      caccacCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTg                                                                                                                                  <  3:336461/140‑1 (MQ=255)
                         caccGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGc                                                                                                                       >  1:220419/1‑148 (MQ=255)
                         caccGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGc                                                                                                                       >  6:110550/1‑148 (MQ=255)
                             ggCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGACCGGCTAtgt                                                                                                                  >  6:248804/1‑149 (MQ=255)
                             ggCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTAtgt                                                                                                                  <  8:112488/149‑1 (MQ=255)
                              gCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTAtgtg                                                                                                                 <  2:11384/149‑1 (MQ=255)
                                         aGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGAtgtg                                                                                                      >  4:71960/1‑149 (MQ=255)
                                           cTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                     <  3:71960/148‑1 (MQ=255)
                                           cTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGgc                                                                                                    >  5:124090/1‑149 (MQ=255)
                                                    aGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                     >  2:277017/1‑139 (MQ=255)
                                                    aGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                     <  1:277017/139‑1 (MQ=255)
                                                        aTTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGgc                                                                                                    >  7:351542/1‑136 (MQ=255)
                                                        aTTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGgc                                                                                                    <  8:351542/136‑1 (MQ=255)
                                                         ttACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCg                                                                                      >  5:25661/1‑149 (MQ=255)
                                                             cGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCa                                                                                                                                <  4:198820/103‑1 (MQ=255)
                                                             cGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAAc                                                                                  <  5:110550/149‑1 (MQ=255)
                                                             cGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGACGTGGCGCTTCCGAGGTTCGCAAc                                                                                  >  5:229219/1‑149 (MQ=255)
                                                               gCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTg                                                                                >  3:97766/1‑149 (MQ=255)
                                                               gCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTg                                                                                >  1:37705/1‑149 (MQ=255)
                                                                      cTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCg                                                                         <  4:97766/149‑1 (MQ=255)
                                                                      cTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCg                                                                         <  3:268809/149‑1 (MQ=255)
                                                                       tGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCg                                                                         >  4:268809/1‑148 (MQ=255)
                                                                         ggTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGACGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCgg                                                                        <  6:229219/147‑1 (MQ=255)
                                                                              aGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGAtgt                                                                                                       >  4:312618/1‑111 (MQ=255)
                                                                              aGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGAtgt                                                                                                       <  3:312618/111‑1 (MQ=255)
                                                                                     gggAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGtt                                                            <  8:31593/147‑1 (MQ=255)
                                                                                     gggAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTc                                                           <  2:220419/148‑1 (MQ=255)
                                                                                       gAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                     <  8:357970/104‑1 (MQ=255)
                                                                                       gAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTgg                                                                                                     >  7:357970/1‑104 (MQ=255)
                                                                                          cGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGt                                                     >  4:13589/1‑149 (MQ=255)
                                                                                               aGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCt                                                <  3:13589/149‑1 (MQ=255)
                                                                                               aGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCt                                                <  4:199969/149‑1 (MQ=255)
                                                                                                gCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCctgc                                                                   <  8:358509/129‑1 (MQ=255)
                                                                                                gCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCctgc                                                                   >  7:358509/1‑129 (MQ=255)
                                                                                                      aCTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCa                                                                                                                                <  5:153106/62‑1 (MQ=255)
                                                                                                      aCTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCa                                                                                                                                >  6:153106/1‑62 (MQ=255)
                                                                                                       cTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTc                                         >  3:176970/1‑148 (MQ=255)
                                                                                                        ttCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTc                                         >  6:244738/1‑147 (MQ=255)
                                                                                                          cTGGATCTCGATCATGATCACCTTGCCCGCGTTGCTGATCTCCTGCGCTATTGGTGCACTGAACGGCTATGTGCTGTCGATTTGGCGCTTCCGAGGTTCTCAAGTTTTCTTCGGCCTGCTTCTGTTCGGCTGTTTCCTGCCGTTc                                         <  8:305364/145‑1 (MQ=255)
                                                                                                          cTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGtt                                                    <  7:75430/134‑1 (MQ=255)
                                                                                                          cTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGtt                                                    >  8:75430/1‑134 (MQ=255)
                                                                                                          cTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTAGGCTGTTTCCTGCCGTTGCAg                                      >  7:305364/1‑148 (MQ=255)
                                                                                                           tGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTc                                                  <  7:298873/135‑1 (MQ=255)
                                                                                                           tGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTc                                                  >  8:298873/1‑135 (MQ=255)
                                                                                                                   gATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGtgctgc                            >  8:128780/1‑149 (MQ=255)
                                                                                                                          aTCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGc                     <  4:235789/149‑1 (MQ=255)
                                                                                                                              caccaatcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGc                     <  4:164950/138‑1 (MQ=255)
                                                                                                                              caccaatcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGc                     >  3:164950/8‑145 (MQ=255)
                                                                                                                                gTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGtt               <  5:244738/149‑1 (MQ=255)
                                                                                                                                  aatcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCa             >  7:96736/4‑149 (MQ=255)
                                                                                                                                   atcgcgGTGGAGATCAGCACCGCGGTTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCAc            >  7:43034/3‑149 (MQ=255)
                                                                                                                                    tcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCAcc           >  2:358943/2‑149 (MQ=255)
                                                                                                                                    tcgcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCAcc           >  1:229872/2‑149 (MQ=255)
                                                                                                                                      gcgGTGGAGATCAGCACCGCGATTGGTGCACTGAACGGCTATGTGATGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCt         >  4:93839/1‑149 (MQ=255)
                                                                                                                                         gTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCgg      >  6:199211/1‑149 (MQ=255)
                                                                                                                                             tGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCGGCAAg  >  3:336351/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                              
GCTTCAAGACCCCCGAAGACATCACCACCGGCAACCTGCTGAGCTGGCCTGCAGTGATTACCGGCATAGGCTGGGTCAAGGCCTGGGGAGCGGTCAGCGGTTACTTCTGGAACTCGATCATGATCACCGTGCCCGCGGTGCTGATCTCCACCGCGATTGGTGCACTGAACGGCTATGTGCTGTCGATGTGGCGCTTCCGAGGTTCGCAACTGTTCTTCGGCCTGCTGCTGTTCGGCTGTTTCCTGCCGTTCCAGACCGTGCTGCTGCCGGCCTCGTTCACCCTCGGCAAG  >  NC_002947/1160304‑1160593

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: