| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,224,601 | A→C | 5.4% | M26R (ATG→AGG) | gltK ← | glutamate/aspartate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,224,601 | 0 | A | C | 5.4% | 238.9 / 4.0 | 74 | M26R (ATG→AGG) | gltK | glutamate/aspartate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (36/34); new base C (2/2); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.73e-01 | |||||||||||
GAACCAGGTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCAT > NC_002947/1224456‑1224746 | gAACCAGGTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGCCCAt > 4:226057/1‑147 (MQ=255) aaCCAGTTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCa < 7:163290/148‑1 (MQ=255) ccAGGTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGtt > 7:92309/1‑149 (MQ=255) ggTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGa < 1:6537/149‑1 (MQ=255) cacattCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGa < 6:346550/144‑1 (MQ=255) gTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAg > 7:60872/1‑149 (MQ=255) tCACCAGCAGCAGCGGAATCGAGCGGAAGTATTTGACGTAGGCGCCGGCCAGGTTCGACAGCATTTTGGTTGACGACAGGCGCATCAGTGCCAGGATGTTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTTAGGGTc < 8:343167/149‑1 (MQ=255) aCCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCAt < 6:202295/149‑1 (MQ=255) ccAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCAt > 5:124545/1‑148 (MQ=255) agcagcagcGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCCTCAAACTGATGGTCATggg < 5:83597/149‑3 (MQ=255) gAATCGAGCGGAAGTACTTGACGTAGGCGCCGGCCAGGTTCGACAGCACGTTGCTTGACGACAGGCGCATCAGTGCCAGGAGGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGGCATGACCATGCCCTcc < 8:92309/149‑1 (MQ=255) tCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATTCCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCag < 2:118343/149‑1 (MQ=255) gAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGAAAGGCGCATCAGTGCAAGGATGGTGCCCAGAACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCagag > 8:62169/1‑149 (MQ=255) aGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg > 6:189946/1‑149 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggcag < 5:189946/149‑1 (MQ=255) gAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggcag > 4:352823/1‑149 (MQ=255) gACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCgg > 5:135444/1‑149 (MQ=255) gACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCg < 3:226057/148‑1 (MQ=255) aCGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCgg < 8:231172/148‑1 (MQ=255) aCGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGACGATGACTCCCATGACCATCAGTTTGTGGGTCATGACCATGCCCTCCCAGAGGGAAGGCAGGTCggg > 8:246099/1‑149 (MQ=255) gTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCACGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGga > 4:187484/1‑149 (MQ=255) tAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGgat < 8:60872/149‑1 (MQ=255) aGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggca > 3:350338/1‑134 (MQ=255) aGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGggca < 4:350338/134‑1 (MQ=255) gcgcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg < 1:66196/129‑1 (MQ=255) gcgcCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg > 2:66196/1‑129 (MQ=255) cGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCACGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCg < 3:187484/149‑1 (MQ=255) ggcAGGTTCGACAGGAGTTTGCTTGACGACAGGCTCATCAGTGCCATGATGGTG‑CCAGCACGATACCGCCGATGTCTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTg < 6:205560/147‑1 (MQ=255) gCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg < 6:184763/123‑1 (MQ=255) gCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAgg > 5:184763/1‑123 (MQ=255) gCCAGGGTCGACAGCAGGTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCt < 5:320087/149‑1 (MQ=255) gACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAtccat > 5:118015/1‑149 (MQ=255) gACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCAGCGAAAtcatc < 6:193273/149‑4 (MQ=255) cTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACtt > 5:303374/1‑149 (MQ=255) gcgcATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAAt < 4:368324/122‑1 (MQ=255) gcATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGa > 6:254439/1‑148 (MQ=255) aTCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAAt > 7:12406/1‑149 (MQ=255) aGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATca < 6:303374/148‑1 (MQ=255) gTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcagg > 6:355766/1‑149 (MQ=255) gTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcagg < 6:124545/149‑1 (MQ=255) tGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggc > 2:193070/1‑149 (MQ=255) gCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggc > 1:64004/1‑148 (MQ=255) ccAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggc > 3:63649/1‑147 (MQ=255) ccAGGATGGTGCCCAGCACGATACCGCCGATGACTACCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGGTGAAATCCATTTCCATTTACTTGACCCCCACGGAAATcaggaca > 3:9505/1‑149 (MQ=255) gTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACgg < 2:64004/148‑1 (MQ=255) tGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcc > 2:309033/1‑139 (MQ=255) tGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcc < 1:309033/139‑1 (MQ=255) gCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttc > 5:345705/1‑149 (MQ=255) cGATACCGACGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGTGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttcttc < 7:246099/149‑1 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTttcttc > 5:249420/1‑148 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTtcttct > 1:361379/1‑149 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTtcttct > 8:53278/1‑149 (MQ=255) gATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTtcttct < 5:355766/149‑1 (MQ=255) aTACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc < 6:135444/149‑1 (MQ=255) aTACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc < 3:352823/149‑1 (MQ=255) cgccgATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGAc > 6:152338/1‑148 (MQ=255) ccgATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCAt > 5:345711/1‑149 (MQ=255) tggtcATGACCCTCAAACTGATGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcagg > 2:150223/5‑113 (MQ=38) tggtcATGACCCTCAAACTGATGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcagg < 1:150223/109‑1 (MQ=38) cTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATACATTTCAATTTACTTGCACACCACGGAAATAAGGCAAGGCACGTCTCATTTCTTCTCGACCATGCGAAt > 8:157946/1‑148 (MQ=255) cTCCCATGAACATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCAt < 7:62169/148‑1 (MQ=255) tcATGACCCTCAAACTGATGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag > 1:183766/2‑148 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc < 3:5964/133‑1 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTtctc > 4:5964/1‑133 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGagc < 4:63649/149‑1 (MQ=255) ccATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGag > 2:182562/1‑148 (MQ=255) aCCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCAt < 5:254439/149‑1 (MQ=255) ccATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATc > 1:12620/1‑101 (MQ=255) ccATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATc < 2:12620/101‑1 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca < 4:1296/106‑1 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATcaggcca > 3:1296/1‑106 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGa < 5:34433/140‑1 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGa > 6:34433/1‑140 (MQ=255) cATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCAt > 4:76872/1‑147 (MQ=255) | GAACCAGGTGATCACCAGCAGCAGCGGAATCGAGCGGAAGTAGTTGACGTAGGCGCCGGCCAGGTTCGACAGCAGTTTGCTTGACGACAGGCGCATCAGTGCCAGGATGGTGCCCAGCACGATACCGCCGATGACTCCCATGACCATCAGTTTGAGGGTCATGACCATGCCCTCCCAGAGGGCAGGCAGGGCGGGGATGATTTCGCTGAAATCCATTTCCATTTACTTGCCCCCCACGGAAATCAGGCCAGGCACGGCGACTTTCTTCTCGACCATGCGCATGAGCAGCAT > NC_002947/1224456‑1224746 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |