| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,278,484 | A→T | 8.9% | intergenic (‑311/+252) | PP_5465 ← / ← PP_1117 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,278,484 | 0 | A | T | 8.9% | 329.7 / 17.1 | 112 | intergenic (‑311/+252) | PP_5465/PP_1117 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (51/51); new base T (6/4); total (57/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.43e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.68e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGAATA > NC_002947/1278339‑1278632 | ttGCGCTATGTCCTACGTACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGt < 2:29371/148‑1 (MQ=255) tGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGtct > 3:116927/1‑149 (MQ=255) gcgcTATCTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGtct < 6:361462/148‑1 (MQ=255) cgcTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGtctc < 5:252140/148‑1 (MQ=255) cgcTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTctct > 6:120316/1‑149 (MQ=255) cgcTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTctct > 2:135700/1‑149 (MQ=255) tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTacg < 6:261112/148‑3 (MQ=255) tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTac < 1:340034/147‑2 (MQ=255) tGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATg < 1:135700/148‑1 (MQ=255) atctcTACGGACAATCAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTacgc < 7:247279/145‑4 (MQ=255) gTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATgg > 5:205252/1‑148 (MQ=255) tCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATggg < 6:68628/148‑1 (MQ=255) cTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGt > 4:188141/1‑149 (MQ=255) tACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACTTTGTCTCTTacgc > 8:247279/1‑141 (MQ=255) cGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTggg < 7:295775/149‑1 (MQ=255) gACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGt > 7:155121/1‑148 (MQ=255) aCAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTa < 1:346562/149‑1 (MQ=255) cAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAg < 8:155121/149‑1 (MQ=255) aaTGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTgg < 5:69889/143‑1 (MQ=255) aaTGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTgg > 6:69889/1‑143 (MQ=255) aaTGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGt > 6:185582/1‑149 (MQ=255) aaTGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGt > 6:219124/1‑149 (MQ=255) aTGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGtt < 5:120316/149‑1 (MQ=255) tGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTg > 4:254487/1‑149 (MQ=255) tGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTg > 7:347838/1‑149 (MQ=255) tGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTg > 8:162768/1‑149 (MQ=255) agagcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTc < 2:143212/148‑1 (MQ=255) gagcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCaa < 7:101865/149‑1 (MQ=255) gcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGt < 5:219124/149‑1 (MQ=255) gcaagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGt < 1:181388/149‑1 (MQ=255) caagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGtt > 4:328661/1‑141 (MQ=255) caagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGtt < 3:328661/141‑1 (MQ=255) aagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGa > 7:48802/1‑149 (MQ=255) aagagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGa > 7:42916/1‑149 (MQ=255) agagcaGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGat < 7:162768/149‑1 (MQ=255) caGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATc > 2:375495/1‑148 (MQ=255) caGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCt < 6:205252/149‑1 (MQ=255) aGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTg < 5:329515/142‑1 (MQ=255) aGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTg > 6:329515/1‑142 (MQ=255) gAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGa > 7:124978/1‑149 (MQ=255) ttGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGcc > 1:169196/1‑149 (MQ=255) aTCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGAt > 1:105043/1‑149 (MQ=255) tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATgg < 3:168366/146‑1 (MQ=255) tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCt > 3:104220/1‑148 (MQ=255) tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCt > 8:100199/1‑148 (MQ=255) tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCt < 8:48802/148‑1 (MQ=255) tgtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCt < 8:42916/148‑1 (MQ=255) gtAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTa < 2:105043/148‑1 (MQ=255) tAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGtctc < 1:313671/99‑1 (MQ=255) aaaTTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACAt < 5:185582/148‑1 (MQ=255) attaattaTAATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACAGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAg > 5:30300/1‑149 (MQ=255) ttaattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAgg > 3:320911/1‑149 (MQ=255) aattaTTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGtt > 2:364686/1‑149 (MQ=255) attattATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGtt < 1:364686/148‑1 (MQ=255) attatAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGAc < 4:116927/148‑1 (MQ=255) ttatAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACa < 6:271511/148‑1 (MQ=255) taAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTg > 7:41344/1‑148 (MQ=255) cAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAt < 8:104910/141‑1 (MQ=255) cAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACAt > 7:104910/1‑141 (MQ=255) aCATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAgg < 7:131006/132‑1 (MQ=255) aCATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAgg > 8:131006/1‑132 (MQ=255) aTCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCg > 5:373110/1‑149 (MQ=255) tCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGt < 6:373110/149‑1 (MQ=255) ccTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGtt > 5:307421/1‑149 (MQ=255) cTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTg < 3:254487/149‑1 (MQ=255) aTAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGAc < 8:347838/148‑1 (MQ=255) aTAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGAc < 1:375495/148‑1 (MQ=255) tAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCTTGTGATATCTGATAGCCGATGGCTTCATGAGGTTGACATTGTCAACTTGCGTTGACCg > 1:110046/1‑149 (MQ=255) tAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCg > 1:114663/1‑149 (MQ=255) aGTGAAGTGTTGCCTGACGGTACTTCAGAAACAGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTCTGTTAGTTGTCAAGTGATATATGATATCCTAAGGCTACATGAGGTTGACATTGACAACTTGCGTTgcacgt > 4:75949/1‑144 (MQ=255) tGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGc < 2:169196/149‑1 (MQ=255) tGAAGTGTTGCCTGACGGTACGTCAGAAACAGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTg > 4:208019/1‑148 (MQ=255) ttGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATa < 8:124978/149‑1 (MQ=255) cTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGTGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGt > 3:52662/1‑149 (MQ=255) cTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTg < 8:34059/142‑1 (MQ=255) cTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTg > 7:34059/1‑142 (MQ=255) cGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCtg < 3:188141/149‑1 (MQ=255) cGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAg < 6:307421/149‑1 (MQ=255) gTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATa < 2:29378/81‑1 (MQ=255) gTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGtt < 8:203173/120‑1 (MQ=255) aCCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCg > 3:82270/1‑148 (MQ=255) aaTTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACtt > 6:207837/1‑149 (MQ=255) cAGTGAGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCa < 7:172773/94‑1 (MQ=255) cAGTGAGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCa > 8:172773/1‑94 (MQ=255) tGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAAtgtg > 3:72034/1‑149 (MQ=255) gggAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGt < 6:298808/135‑1 (MQ=255) gggAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGt > 5:298808/1‑135 (MQ=255) ggAGCGTAAGAGACAAAGTCTCTTATGGTAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTgg < 3:75949/148‑1 (MQ=255) tcccatAAGAGACTTTGTCTCTTACGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATcc < 5:156731/126‑1 (MQ=255) gCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATag < 2:166220/111‑1 (MQ=255) gCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATag > 1:166220/1‑111 (MQ=255) ccatAAGAGACTTTGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTc > 8:221819/4‑148 (MQ=255) catAAGAGACTTTGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTc > 6:360402/3‑147 (MQ=255) cGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTc > 2:358367/1‑147 (MQ=255) gTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATgg < 2:149508/62‑1 (MQ=255) gTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATgg > 1:149508/1‑62 (MQ=255) gTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAg < 4:82270/149‑1 (MQ=255) agagACAAAGTCTCTTATGTGAGTCGGTTAGTTGTCAAGTCATATCTGATACCCGATTGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTCTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGcc < 2:110046/149‑1 (MQ=255) aCAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATg > 5:355813/1‑148 (MQ=255) aaGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGAAt < 5:207837/149‑1 (MQ=255) | TTGCGCTATGTCCTACGGACAATGAAGAGCAAGAGCAGAAGCTTGATCTGTGTAAAATTAATTATTATAAATCAACATCCTGATAGTGAAGTGTTGCCTGACGGTACGTCAGAAACCGCAATTCCAGTGGGAGCGTAAGAGACAAAGTCTCTTATGGGAGTGGGTTAGTTGTCAAGTGATATCTGATAGCCGATGGCTACATGAGGTTGACATTGTCAACTTGCGTTGACCGTGCATTGATAGAGTTCTGTGCAGAAATCCGTCACTTGAAATGTGGCTCAAGGCCATGGAATA > NC_002947/1278339‑1278632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |