Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,350,501 | T→A | 6.7% | K11N (AAA→AAT) ‡ | PP_1176 ← | hypothetical protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,350,501 | 0 | T | A | 6.7% | 232.7 / 5.2 | 75 | K11N (AAA→AAT) ‡ | PP_1176 | hypothetical protein |
Reads supporting (aligned to +/- strand): ref base T (36/34); new base A (2/3); total (38/37) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
GGAGAGCCGTTTCTGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAACGGGTTGGTAGTC > NC_002947/1350353‑1350648 | ggAGAGCCGTTTCTGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCAt > 2:93826/1‑149 (MQ=255) ccGTTTCTGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCAttt > 5:235088/1‑145 (MQ=255) ccGTTTCTGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCAttt < 6:235088/145‑1 (MQ=255) gTTTCTGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGc > 7:117538/1‑149 (MQ=255) tGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCttgt > 5:286766/1‑149 (MQ=255) tGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCttgt > 7:23813/1‑149 (MQ=255) aCGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCttgt < 7:189318/147‑1 (MQ=255) aCGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCttg < 8:117538/146‑1 (MQ=255) gagaACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGAt < 2:108762/149‑1 (MQ=255) gagaACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCAAATGGCAGCCtttttatt < 5:111895/149‑4 (MQ=255) gaACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGc > 7:109514/1‑149 (MQ=255) cGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCt > 3:138090/1‑147 (MQ=255) gggATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAg > 8:335538/1‑149 (MQ=255) cGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGt < 7:228410/148‑1 (MQ=255) cTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGtcaa < 6:286766/149‑1 (MQ=255) tgtgAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACATGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCACGGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGtcaat < 1:289546/148‑1 (MQ=255) tgtgAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGtcaat < 4:138090/147‑1 (MQ=255) tgtgAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGtcaat < 8:109514/147‑1 (MQ=255) tgtgAGCGTTCTTAAGCACCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTg > 2:305101/1‑117 (MQ=255) tgtgAGCGTTCTTAAGCACCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTg < 1:305101/117‑1 (MQ=255) aGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATcc > 6:334201/1‑149 (MQ=255) cGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAAAAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATcc > 7:234521/1‑147 (MQ=255) ttCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCGTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCGTTGTGGATGGTCAGCCCGGTCAAGACATCCCAGc > 3:284827/1‑149 (MQ=255) aGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGtcaa > 2:163308/1‑132 (MQ=255) aGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGtcaa < 1:163308/132‑1 (MQ=255) ggAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCAc < 5:334201/149‑1 (MQ=255) cGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCt > 7:64123/1‑149 (MQ=255) aTCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGAt < 8:64123/148‑1 (MQ=255) tCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATAc > 6:133690/1‑149 (MQ=255) cgATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTc > 8:2364/1‑148 (MQ=255) cgATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTc > 8:7964/1‑148 (MQ=255) agatctcAAAAACAGGCAAGGTCGGCAGACGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGa < 5:30226/143‑1 (MQ=255) ccAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCgg > 2:4051/1‑102 (MQ=255) ccAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCgg < 1:4051/102‑1 (MQ=255) cAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCacac > 8:98397/1‑149 (MQ=255) cAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCacac > 2:295349/1‑149 (MQ=255) aaaaaCAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGa < 5:24612/142‑1 (MQ=255) aaaaaCAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGa > 6:24612/1‑142 (MQ=255) aaaaaCAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACAcg > 7:189624/1‑149 (MQ=255) aaaaaCAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACAcg > 3:183914/1‑149 (MQ=255) aaaaaCAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGACA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACCCGa > 6:30226/1‑142 (MQ=255) aaaaCAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACAcgc < 8:189624/149‑1 (MQ=255) cAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTTTCGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGtct < 6:299577/149‑1 (MQ=255) aGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGtctc < 8:23813/149‑1 (MQ=255) gCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCACCTCAA‑CGCACCACCCGTCTGATACACGATc > 8:235858/1‑127 (MQ=255) ccGTATGTAACGTCCTTTTCTTCATCTTCCA‑TGCAATAAAAATGCCGCCATTTGGCATCCTTTTTTTTTCTCACCCCGGTCAATCAATCCCAGCTCAACCGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTtcttct < 1:93826/149‑1 (MQ=255) ccGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGtctc < 2:5521/134‑1 (MQ=255) ccGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGtctc > 1:5521/1‑134 (MQ=255) ccGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTACTtctc > 7:323861/1‑149 (MQ=255) cGTAGGAAACGTCATTTTCTGCTTCTGCCA‑GTCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTcc < 8:323861/149‑1 (MQ=255) gTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGtctc < 2:31226/132‑1 (MQ=255) gTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGtctc > 1:31226/1‑132 (MQ=255) cTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCaa < 8:136405/122‑1 (MQ=255) cTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCaa > 7:136405/1‑122 (MQ=255) cTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTcc < 1:295349/148‑1 (MQ=255) cTGTTCTGCTTCTGCCA‑GGCAAAAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCa < 8:234521/149‑1 (MQ=255) tGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCATACCGGTCAATCAATACCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCAt > 5:272601/1‑149 (MQ=255) tGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCAt > 5:285171/1‑149 (MQ=255) gTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCAt > 2:357984/1‑148 (MQ=255) tgcttctgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATg < 2:116986/145‑1 (MQ=255) tgcttctgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATg > 1:116986/1‑145 (MQ=255) gcttctgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTcc > 7:112604/1‑129 (MQ=255) gcttctgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTcc < 8:112604/129‑1 (MQ=255) ctgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGc < 7:335538/147‑1 (MQ=255) tgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTc < 5:231254/85‑1 (MQ=255) tgcCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTc > 6:231254/1‑85 (MQ=255) aTAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAaag < 2:191731/103‑1 (MQ=255) aTAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAaag > 1:191731/1‑103 (MQ=255) acaaGGCTGCCAAATGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAaagaag > 3:118369/3‑103 (MQ=255) acaaGGCTGCCAAATGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAaagaag < 4:118369/101‑1 (MQ=255) aaaaGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAAc < 5:133690/148‑1 (MQ=255) aaaGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAACgg < 6:285171/149‑1 (MQ=255) aGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAACGGGt < 7:98397/149‑1 (MQ=255) aGGCTGCCAAATGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATgg < 3:368987/141‑1 (MQ=255) aGGCTGCCAAATGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATgg > 4:368987/1‑141 (MQ=255) ggCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAACGGGtt < 4:183914/149‑1 (MQ=255) ccATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAACGGGTTGGTAg > 3:177722/1‑149 (MQ=255) aTTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAAGCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGGTCTTCTCCTTCTTCAAGTCACTGATCTCGCTCATACATGGGAACGGGTTGGTAGTc > 6:371494/1‑149 (MQ=255) | GGAGAGCCGTTTCTGACGAGAACGGGATTCCGCTATGTGAGCGTTCTTAAGCGCCGGAAAACGTTATCGCGATGTCCAAAAACAGGCAAGGTCGGCAGCCGTAGGAAACGTCCTGTTCTGCTTCTGCCA‑GGCAATAAAAAGGCTGCCATTTGGCAGCCTTGTTGATGCTCAGCCCGGTCAATCAATCCCAGCTCAA‑CGCCCCACCCGTCTGATACTCGATCACACGCGTCTCAAAGAAGTTCTTCTCCTTCTTCAAGTCCATGATCTCGCTCATCCATGGGAACGGGTTGGTAGTC > NC_002947/1350353‑1350648 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |