| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 191,125 | C→T | 100% | V83M (GTG→ATG) | PP_0166 ← | HlyD family secretion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 191,125 | 0 | C | T | 100.0% | 242.0 / NA | 71 | V83M (GTG→ATG) | PP_0166 | HlyD family secretion protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (33/38); total (33/38) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
GCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCACCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGCATCTTCGATCAGG > NC_002947/190982‑191267 | gCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTgg < 6:159300/149‑1 (MQ=255) cGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTgg < 3:103790/148‑1 (MQ=255) aGCCTCGGTTTCACCAACTTTGGAGGCTAAGCGGGTTTCATTTTGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACg < 1:126925/149‑1 (MQ=255) aGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTATCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCACCTTGGCGAAGATTTCGGCGACGATCCCGCCCTCCAGGATCTGGATCTTCTGCATCTTGGAAGAct > 6:244756/1‑148 (MQ=255) ccTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGTCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGaa < 5:191303/143‑1 (MQ=255) ccTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGTCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGaa > 6:191303/1‑143 (MQ=255) ccTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACgg > 2:239694/1‑148 (MQ=255) tttCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgcc < 4:54339/149‑1 (MQ=255) cACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgcctt < 1:87091/148‑1 (MQ=255) cACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgcctt < 6:375578/148‑1 (MQ=255) aCCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCATCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgccttgc > 5:364986/1‑149 (MQ=255) ccAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgccttgcc > 1:175582/1‑149 (MQ=255) cAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgccttgcct > 4:192747/1‑149 (MQ=255) cAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgccttgcc < 2:228266/148‑1 (MQ=255) cAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGgccttgcc > 1:228266/1‑148 (MQ=255) cAACGTTGGAGGCGAAGAGGGTTTCATCCAGGCGCAGCAATGGCTGGCCAACTTCGACGATCTGCACATCATTGGCGAAGATTTCGGCTACTATGCCGCCATCAAGGTTCTGGATATTCTGCATCATGGAAGACGGAATGgccttgcct > 1:249235/1‑149 (MQ=255) aGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACt < 1:370596/149‑1 (MQ=255) gCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACtt < 5:168423/149‑1 (MQ=255) ggTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTtcgt < 2:74785/149‑1 (MQ=255) gTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTtcgtc > 4:58888/1‑149 (MQ=255) aTCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATgg > 1:258682/1‑149 (MQ=255) tCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATggg > 6:65693/1‑149 (MQ=255) cAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGgc < 1:310227/148‑1 (MQ=255) cAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGgc < 1:210406/148‑1 (MQ=255) cgcAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCAcccc > 5:35535/1‑124 (MQ=255) cgcAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCAcccc < 6:35535/124‑1 (MQ=255) gcaATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTg < 2:175582/149‑1 (MQ=255) tggctggcCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGcc > 2:78288/1‑148 (MQ=255) gcCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATAc < 1:239694/147‑1 (MQ=255) cccACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAAt < 3:58888/149‑1 (MQ=255) ccACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACaa < 5:16017/147‑1 (MQ=255) ccACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACaa > 6:16017/1‑147 (MQ=255) ccACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATc < 5:65693/149‑1 (MQ=255) cACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATc > 5:224143/1‑148 (MQ=255) aCTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATc > 5:340036/1‑147 (MQ=255) aCTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGGTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCaa < 4:299842/149‑1 (MQ=255) gacgaTCTGCCCCTCCTTGGCGATGATTTCGGCGACGATGCGGCCCTCCAGGTTCTGGATCTTCTGGATGTTGGAAGACGGATTGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTgg < 7:103444/131‑1 (MQ=255) gacgaTCTGCCCCTCCTTGGAGAGGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTATGAATCTTGGAAGACCGAATGGCCTTGCCTTCAACCCGCGTAACTTCGTCTATGGGCGCGACGCTgg > 8:103444/1‑131 (MQ=255) acgaTCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATgg < 2:352406/118‑1 (MQ=255) gCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACgaagaa > 7:92571/1‑148 (MQ=255) ccccTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACgaag < 6:224143/145‑1 (MQ=255) ccccTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACga < 6:364986/143‑1 (MQ=255) cccTCCTTGGCGAGGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAg > 4:88595/1‑149 (MQ=255) cccTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAg < 3:192747/149‑1 (MQ=255) cctTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GAt > 1:350414/1‑148 (MQ=255) ttGGCGAAGATTTCGGCGACGATGCCGCCCTACAGGTTCTGGAGCTTCTGCATCTTGGCAGACGGAATGGCCTTGCCTTCACCCCGCGAAACTACGTCGATGTGCGCGACGCAGGCCCATACAATCAAGAACACGAAGAACAA‑TATCAc > 5:67312/1‑149 (MQ=255) tGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACgaa < 6:237571/136‑1 (MQ=255) tGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACgaa > 5:237571/1‑136 (MQ=255) gCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGc < 2:350414/148‑1 (MQ=255) cGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGccc > 2:230765/1‑149 (MQ=255) gAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGcccc < 8:92571/149‑1 (MQ=255) gATATCGGCGACGATGCCGCCCTCCAGCTTCTGGATCTTCTGCATCTTGGAAGACGGAATGTACTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACgaag < 5:248314/130‑1 (MQ=255) ttCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCAt > 8:282506/1‑109 (MQ=255) ttCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCAt < 7:282506/109‑1 (MQ=255) ggCGACGATGCCGCCCTCCAGGTTCTGGATCATCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCa < 6:316050/149‑1 (MQ=255) cgacgaTGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGc < 2:258682/149‑1 (MQ=255) cgacgaTGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGc < 1:230765/149‑1 (MQ=255) gaTGCCGCCCTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGca > 3:248019/1‑149 (MQ=255) ccTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCAcgcgc > 5:313700/1‑149 (MQ=255) cTCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCAcgcgcg > 8:24948/1‑149 (MQ=255) tCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCgg > 6:173077/1‑149 (MQ=255) tCCAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCgg > 6:214965/1‑149 (MQ=255) cAGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTg > 2:45384/1‑149 (MQ=255) aGGTTCTGGATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGc < 6:340036/149‑1 (MQ=255) ggATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGCTGGTCAGCCGCACCACGCGCGGGGCAGCGTCg > 6:264067/1‑149 (MQ=255) gATCTTCTGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAGCGATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGCATCTTc < 1:78288/148‑1 (MQ=255) ttctGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGCATCTTCGATCAg > 5:322022/1‑149 (MQ=255) ctGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCAcgcgcg > 2:1647/1‑131 (MQ=255) ctGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCAcgcgcg < 1:1647/131‑1 (MQ=255) ctGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGCATCTTCGATc < 5:214965/145‑1 (MQ=255) ctGCATCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGCATCTTCGATCAgg < 4:248019/148‑1 (MQ=255) | GCGGTCAGCCTCGGTTTCACCAACGTTGGAGGCGAAGCGGGTTTCATCCAGGCGCAGCAATGGCTGGCCCACTTCGACGATCTGCCCCTCCTTGGCGAAGATTTCGGCGACGATGCCGCCCTCCAGGTTCTGGATCTTCTGCACCTTGGAAGACGGAATGGCCTTGCCTTCACCCCGCGTAACTTCGTCGATGGGCGCGACGCTGGCCCATACAATCAAGAACACGAAGAACAG‑GATCACGCCCCAGATGGTCAGCCGCACCACGCGCGGTGCATCTTCGATCAGG > NC_002947/190982‑191267 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |