| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,703,252 | C→T | 10.4% | intergenic (+101/‑66) | lysS → / → PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,703,252 | 0 | C | T | 10.4% | 165.4 / 9.6 | 68 | intergenic (+101/‑66) | lysS/PP_1497 | lysine‑‑tRNA ligase/TetR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (28/32); new base T (2/5); total (30/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.41e-01 | |||||||||||
ATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGAC > NC_002947/1703107‑1703400 | aTCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAACCCCCAC‑CTACAAAAGCC‑GTg > 2:283380/1‑149 (MQ=255)aTCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTg > 5:165015/1‑149 (MQ=255)aTCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTg > 1:36132/1‑149 (MQ=255)aTCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTg < 1:104485/149‑1 (MQ=255) tCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGTGTAAACCCGCTC‑CTACAAAGGCC‑TTGt < 1:10534/149‑1 (MQ=255) tCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGt < 4:156147/149‑1 (MQ=255) tCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGt < 7:50205/149‑1 (MQ=255) ccGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGt < 5:319742/148‑1 (MQ=255) cgcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCTCTC‑CTACAAAGGCC‑TTGTAg < 1:293447/149‑1 (MQ=255) cgcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAGGCCT‑TTGTAg < 8:53485/149‑1 (MQ=255) cgcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAg < 1:38470/149‑1 (MQ=255) cgcgACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAg < 7:353323/149‑1 (MQ=255) gACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAACCCGCTG‑CGACAAAGGCC‑GTGGTGGAg > 6:231587/1‑149 (MQ=255) gACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAGGCCT‑TTGTAGGAg < 3:160388/149‑1 (MQ=255) aCGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAGGCCT‑TTGTAGGAGc < 4:75405/149‑1 (MQ=255) gTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCgg < 2:133980/149‑1 (MQ=255) gTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCgg < 1:293146/149‑1 (MQ=255) aTCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGtt > 8:74181/1‑149 (MQ=255) aTCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGt < 3:205575/148‑1 (MQ=255) tCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGttt < 6:165015/149‑1 (MQ=255) ttCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCg < 3:188851/139‑1 (MQ=255) ttCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCg > 4:188851/1‑139 (MQ=255) ttCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTAcc < 8:174052/147‑1 (MQ=255) ttCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGGTTACCcg > 3:283710/1‑149 (MQ=255) cccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCcg‑c < 5:231587/148‑1 (MQ=255) ccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCCCTTCGCGGGTAAACCCGCTC‑CTACAAGGCCT‑TTGTAGGAGc > 6:28709/1‑135 (MQ=255) ccGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCCCTTCGCGGGTAAACCCGCTC‑CTACAAGGCCT‑TTGTAGGAGc < 5:28709/135‑1 (MQ=255) cacaTGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAgg < 6:70107/149‑1 (MQ=255) tGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTTAACCCCCGC‑CTACAAACGCC‑GGTGAGGAGCGGGTTTAACCGCCGACGGGGc > 5:31060/1‑149 (MQ=255) gCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTTGGAGCGGGTTTACCCG‑CGAAGGGGc > 5:196159/1‑147 (MQ=255) gCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGc > 5:175933/1‑147 (MQ=255) gTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAgg < 2:80070/142‑1 (MQ=255) gTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAgg > 1:80070/1‑142 (MQ=255) aCGAGCCGCGTTTCGAGGCGGCTTTTTCTTGCTTGACGCTTTTTGTTGTCAGTACCGGCCTCTTCGCGGGTAACCCCGCTC‑CTACAACGGCC‑TTTTTGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAg < 2:36132/148‑1 (MQ=37) gccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCggg > 1:556/1‑98 (MQ=255) gccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCggg < 2:556/98‑1 (MQ=255) ccTTTCGTGGCGGCTTTTTCTTGCATGAAGCTTTTTGTTGTCAGTCCCGGCGTCTTCGGGGTTAAACCCGCTC‑TTACAATGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAggg < 6:379257/112‑1 (MQ=25) ccTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAggg > 5:379257/1‑112 (MQ=255) tttCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGt > 3:116713/1‑149 (MQ=255) tCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTTCCCG‑CGAAGGGGCCAGCACTGACGAAACCCCCCCATGAGGGGTGCCCCGTgc > 7:236041/1‑148 (MQ=37) cggcTTTTTCTTGCCTCACGCTTTTTGTTGTCCGTCCCGGCCTCTGCGCGGTAAACCCCGCTC‑CAAAACCGGCC‑TTGTCGGTGGGGTTTAACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCg < 4:283710/149‑1 (MQ=255) ttCTTGCCTGACGCTTTTTGTTGTCAGAACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAACGGCG‑TTGTAGGTGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGc < 6:196159/148‑1 (MQ=37) ccTTAAGCTTAAGTTTGTCAGAACCGGCCTCTTCGCGGGTAACCCCGCTC‑CTACTACGGCC‑TTTTAGGAGCGGGTTAACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCAAGCCTGAc < 6:282701/147‑1 (MQ=255) ccTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACACG‑CGAAGGGGCCAGCACTGACGAAACACCCCCAAGAGGTATCCCCCGTGACACCCGCAAAGCCAGAc > 5:282701/1‑147 (MQ=37) cTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCaa > 4:108319/1‑149 (MQ=255) tgttgtCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGccgccg < 6:175933/148‑1 (MQ=255) gtCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAg < 5:333447/135‑1 (MQ=255) gtCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAg > 6:333447/1‑135 (MQ=255) ctTCGCGGGAAACCCCGCTC‑CTACAACGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGc < 7:74181/149‑1 (MQ=255) cgGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGCCCCCCGCCCTGCCTGCCCAAGGCGCCGCCGGCATCGCCCCCGCCGTCGCCGaaa > 4:377346/1‑149 (MQ=38) gggTAAAACCGGTCACTACAACGGCT‑TTTCTGGTGGGGTTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGaaa < 8:236041/149‑1 (MQ=255) ggTAAACCCGCTC‑CTACAAGGCCT‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGc > 5:190829/1‑149 (MQ=255) tAAACCCGCGC‑CTACAACGGCC‑TTGTCGGAGCGGGTTAACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGt < 6:358695/149‑1 (MQ=255) aaCCCGCTC‑CTACAACGGCC‑TTCTCGGCGCGGTTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGc < 4:116713/149‑1 (MQ=255) cccGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCGTGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc < 7:106828/122‑1 (MQ=255) cccGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCGTGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATc > 8:106828/1‑122 (MQ=255) cccGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCgg < 7:235571/118‑1 (MQ=255) cccGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCgg > 8:235571/1‑118 (MQ=255) ccGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCaa > 6:3632/1‑148 (MQ=255) gCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAGGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCCTGACACCCGCCCTGCCTGACCAAGGCGCCGCCGGCATCGCCCCCGCCGGCGCCGAAAGCCTGCAATaa > 8:79380/1‑148 (MQ=255) cTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAGGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAg < 7:79380/149‑1 (MQ=255) acaaGGCCTTTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCg < 7:345956/127‑1 (MQ=255) acaaGGCCTTTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCg > 8:345956/3‑129 (MQ=255) aaaGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCGGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCg > 8:169325/1‑149 (MQ=255) aaGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTGTCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCg > 3:77376/1‑148 (MQ=255) aGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 3:286323/1‑148 (MQ=255) aGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGc > 5:79664/1‑148 (MQ=255) aGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCa < 5:49667/149‑1 (MQ=255) c‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGCCCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGAc > 4:233509/1‑149 (MQ=255) | ATCCGCGACGTCATCCTGTTCCCGCACATGCGTCCGCAGGCCTGAGTGAGCTGAACGAGCCGCCTTTCGAGGCGGCTTTTTCTTGCCTGAAGCTTTATGTTGTCAGTACCGGCCTCTTCGCGGGTAAACCCGCTC‑CTACAAAGGCC‑TTGTAGGAGCGGGTTTACCCG‑CGAAGGGGCCAGCACTGACGAAACACCCCCATGAGGTATCCCCCGTGACACCCGCCATGCCTGACCAAGGCGCCGCCGGCATCGCCACCGCCGTCGCCGAAAGCGTGCAATACCAAGGCCGCAAGAC > NC_002947/1703107‑1703400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |