Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,715,486 A→C 7.2% R144R (CGA→CGC)  PP_1510 → carboxyvinyl‑carboxyphosphonate phosphorylmutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,715,4860AC 7.2% 214.8 / 5.3 69R144R (CGA→CGC) PP_1510carboxyvinyl‑carboxyphosphonate phosphorylmutase
Reads supporting (aligned to +/- strand):  ref base A (30/34);  new base C (2/3);  total (32/37)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01

GAAGACTGTGCCCAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTGGAGG  >  NC_002947/1715340‑1715634
                                                                                                                                                  |                                                                                                                                                    
gAAGACTGTGCCCAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAg                                                                                                                                                    >  8:153048/1‑149 (MQ=255)
 aaGACTGTGCCCAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTTCGCGCAGc                                                                                                                                                   <  6:23924/149‑1 (MQ=255)
      tgtgCCCAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGc                                                                                                                                               >  3:191411/1‑148 (MQ=255)
      tgtgCCCAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGc                                                                                                                                               >  1:338245/1‑148 (MQ=255)
          cccAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTc                                                                                                                                          >  5:148562/1‑149 (MQ=255)
          cccAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTc                                                                                                                                          <  7:191294/149‑1 (MQ=255)
          cccAGACCATTCTGCGAGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTc                                                                                                                                          <  2:158264/149‑1 (MQ=255)
           ccAGACCATTCTGCGTGCCGCCGAAATTGGGCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCAAAGCCTGCCATTcc                                                                                                                                         >  1:35276/1‑149 (MQ=255)
             aggccATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTATGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCg                                                                                                                                       >  7:108893/4‑149 (MQ=255)
             aGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCg                                                                                                                                       >  7:360521/1‑149 (MQ=255)
                 cATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCa                                                                                                                                   >  4:339510/1‑149 (MQ=255)
                  aTTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCAc                                                                                                                                  <  1:177118/149‑1 (MQ=255)
                   ttCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTATGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCAcc                                                                                                                                 <  8:108893/149‑1 (MQ=255)
                    tCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCt                                                                                                                                >  3:155274/1‑149 (MQ=255)
                     cTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCtt                                                                                                                               >  8:85268/1‑149 (MQ=255)
                        cGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTtgtg                                                                                                                            <  1:143573/149‑1 (MQ=255)
                        cGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTtgt                                                                                                                             <  7:85268/148‑1 (MQ=255)
                         gTGCCGCCGAAATGGGCCTGGGGGGCGGCGCCATCGAAGATGCCAGGGGCCGCAGTGAGGCGCCCCTCTAGGACGGCGGCGTGGCTGGGGCGCGCGTGCGCGCCGCTGGGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCCCCTTGTgc                                                                                                                           <  2:63798/149‑1 (MQ=255)
                           gccgccGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTgcgc                                                                                                                         >  8:26755/1‑149 (MQ=255)
                              gccgAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTTCGCGCAGc                                                                                                                                                   <  8:101333/120‑1 (MQ=255)
                              gccgAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTTCGCGCAGc                                                                                                                                                   >  7:101333/1‑120 (MQ=255)
                                cgAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCggg                                                                                                                    <  2:250029/149‑1 (MQ=255)
                                      tGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGaa                                                                                                               >  1:160426/1‑148 (MQ=255)
                                        gCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGaaaa                                                                                                             <  6:148562/148‑1 (MQ=255)
                                        gCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAAc                                                                                                            <  6:227476/149‑1 (MQ=255)
                                        gCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCAAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAAc                                                                                                            <  2:35276/149‑1 (MQ=255)
                                          cTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACct                                                                                                          <  3:160801/149‑1 (MQ=255)
                                             gtggGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACctgc                                                                                                        <  5:75031/148‑1 (MQ=255)
                                                  cggcTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACg                                                                                                  <  2:338245/149‑1 (MQ=255)
                                                     cTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGAc                                                                                               <  1:3292/149‑1 (MQ=255)
                                                     cTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGAc                                                                                               <  6:39364/149‑1 (MQ=255)
                                                          tCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATg                                                                                          <  2:160426/149‑1 (MQ=255)
                                                            gAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGa                                                                                        <  4:191411/149‑1 (MQ=255)
                                                             aaGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGAc                                                                                       <  2:168631/149‑1 (MQ=255)
                                                                  gCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTcga                                                                                  >  5:98778/1‑149 (MQ=255)
                                                                     aGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTcgacga                                                                               <  7:26755/149‑1 (MQ=255)
                                                                      gTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCgacgac                                                                              <  8:360521/149‑1 (MQ=255)
                                                                              aGTGATGCGCCCACCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCt                                                                                                                                >  6:54338/1‑91 (MQ=255)
                                                                              aGTGATGCGCCCACCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCt                                                                                                                                <  5:54338/91‑1 (MQ=255)
                                                                                         cATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAg                                                           >  8:85445/1‑149 (MQ=255)
                                                                                           tCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGcc                                                         >  1:159109/1‑149 (MQ=255)
                                                                                              aTGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGc                                                          >  6:325016/1‑145 (MQ=255)
                                                                                              aTGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGc                                                          <  5:325016/145‑1 (MQ=255)
                                                                                                 aCTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGcc                                                   >  1:53734/1‑149 (MQ=255)
                                                                                                 aCTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGcc                                                   <  6:98778/149‑1 (MQ=255)
                                                                                                     cGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGc                                                          >  2:333839/1‑138 (MQ=255)
                                                                                                     cGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGc                                                          <  1:333839/138‑1 (MQ=255)
                                                                                                           ggCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTg                                         >  5:467/1‑149 (MQ=255)
                                                                                                             cTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGcc                                       >  5:275892/1‑149 (MQ=255)
                                                                                                                        gTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTAt                                                      <  6:190263/123‑1 (MQ=255)
                                                                                                                        gTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTAt                                                      >  5:190263/1‑123 (MQ=255)
                                                                                                                              gccgcTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGcccc                      >  2:364712/1‑149 (MQ=255)
                                                                                                                                cgcTGTGCAGGCTGCGCGAAGCCTGCCATTGCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCg                    >  7:166625/1‑149 (MQ=255)
                                                                                                                                  cTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCggg                  <  1:364712/149‑1 (MQ=255)
                                                                                                                                    tggCAGGCTTCGCGCAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCgg                   <  1:97788/144‑1 (MQ=255)
                                                                                                                                    tggCAGGCTTCGCGCAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCgg                   >  2:97788/3‑146 (MQ=255)
                                                                                                                                     tgCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTg               >  8:53828/1‑149 (MQ=255)
                                                                                                                                      gCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTgc              >  6:220961/1‑149 (MQ=255)
                                                                                                                                        aGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGGAGAAAACCTGCTGCACGGACGCATGGACCTcgac                                                                                 >  1:266010/1‑80 (MQ=255)
                                                                                                                                        aGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTcgac                                                                                 <  2:266010/80‑1 (MQ=255)
                                                                                                                                          gCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCt                                                                <  6:58567/95‑1 (MQ=255)
                                                                                                                                          gCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCt                                                                >  5:58567/1‑95 (MQ=255)
                                                                                                                                              cgcgAAGCCTGCCATTCCCGTTCCCCTTGTGCGCCCGGCCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGt       <  8:240734/148‑1 (MQ=255)
                                                                                                                                              cgcgAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGt       <  2:53734/148‑1 (MQ=255)
                                                                                                                                              cgcgAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTg      <  7:53828/149‑1 (MQ=255)
                                                                                                                                               gcgAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTgg     <  7:85445/149‑1 (MQ=255)
                                                                                                                                               gcgAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTgg     <  3:339510/149‑1 (MQ=255)
                                                                                                                                               gcgAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTg      >  7:271618/1‑148 (MQ=255)
                                                                                                                                                 gAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTggag   >  7:143643/1‑149 (MQ=255)
                                                                                                                                                  aaGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTggagg  <  4:155274/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
GAAGACTGTGCCCAGACCATTCTGCGTGCCGCCGAAATTGGCCTGGTGGGCGGCTCCATCGAAGATGCCAGTGGCCGCAGTGATGCGCCCATCTATGACTTCGGCTTGGCTGTGGAGCGCGTGCGCGCCGCTGTGCAGGCTGCGCGAAGCCTGCCATTCCCGTTCACCTTGTGCGCCCGGGCAGAAAACCTGCTGCACGGACGCATGGACCTCGACGACACCATCCTGCGCCTGCAAGCCTATGCCGAAGCCGGTGCCGACGTGCTCTACGCCCCCGGGCTGCGCACCGTGGAGG  >  NC_002947/1715340‑1715634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑