| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,814,595 | C→G | 5.2% | intergenic (+95/‑18) | frmC → / → ispF | S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase/2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,814,595 | 0 | C | G | 5.2% | 251.1 / 3.2 | 76 | intergenic (+95/‑18) | frmC/ispF | S‑formylglutathione hydrolase/S‑lactoylglutathione hydrolase/2‑C‑methyl‑D‑erythritol 2,4‑cyclodiphosphate synthase |
| Reads supporting (aligned to +/- strand): ref base C (33/39); new base G (2/2); total (35/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
CTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGACGTGCTGCTGCACGCCC > NC_002947/1814449‑1814742 | cTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTTCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTc < 7:238469/147‑1 (MQ=255)cTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTc > 8:238469/1‑147 (MQ=255) aTCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCa < 3:183587/148‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg < 7:261671/149‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg < 1:30712/149‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg < 1:48004/149‑1 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAgg > 3:140390/1‑149 (MQ=255) tCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAgg > 1:63234/1‑149 (MQ=255) gaggagCACCTGCGCCATCGTGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGc > 5:21143/1‑149 (MQ=255) gaggagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAGGGc < 2:63234/149‑1 (MQ=255) aggagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGAATGAGTCAGGGCg < 4:140390/149‑1 (MQ=255) gagCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGtt > 4:65212/1‑149 (MQ=255) cACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTc < 6:65063/149‑1 (MQ=255) cACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTc > 4:344462/1‑149 (MQ=255) cACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTc < 2:364159/149‑1 (MQ=255) cccTGCGCCATCATGCGGTGGCACGGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCt < 7:291660/148‑1 (MQ=255) ccTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCtt < 1:164164/149‑1 (MQ=255) cgcCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATg < 5:172586/148‑1 (MQ=255) catcatGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTa < 5:83619/149‑1 (MQ=255) catcatGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTa > 3:51153/1‑149 (MQ=255) ggTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGcc > 8:175947/1‑147 (MQ=255) ggTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCAc > 1:342396/1‑149 (MQ=255) tGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACgg < 4:181110/149‑1 (MQ=255) gCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCt < 7:222483/149‑1 (MQ=255) aCTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg > 7:160763/1‑118 (MQ=255) aCTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAgg < 8:160763/118‑1 (MQ=255) aCTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTAc > 5:80529/1‑149 (MQ=255) cGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGc < 7:175947/149‑1 (MQ=255) tttAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCg > 5:293274/1‑149 (MQ=255) aaCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCa > 6:55416/1‑143 (MQ=255) aaCGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCa < 5:55416/143‑1 (MQ=255) tgtgGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑gg > 8:345494/1‑149 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGt < 3:65212/148‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGt < 2:67116/148‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTg < 6:21143/149‑1 (MQ=255) gCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTc < 2:342396/149‑1 (MQ=255) gCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCt > 2:225930/1‑149 (MQ=255) ccGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTgg > 5:51866/1‑149 (MQ=255) ccGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTgg > 2:18396/1‑149 (MQ=255) ttggggCTGCTGTGCAGCCCTAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCgg > 3:341527/4‑149 (MQ=255) ggCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTg > 1:369053/1‑149 (MQ=255) cTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCg < 6:80529/149‑1 (MQ=255) gCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTa > 2:102276/1‑149 (MQ=255) cacaGCAGGCGCAATCGCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCggc < 8:88051/141‑2 (MQ=255) cacaGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTAt > 5:33758/1‑149 (MQ=255) cacaGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTCACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCCCGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCggc > 7:88051/1‑140 (MQ=255) cacaGCAGCCCCAATCCCACAAATCCACTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTAt > 6:185710/1‑149 (MQ=255) cacaGCAGCCCCAATCCCACAAATCCACTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTAt > 6:191071/1‑149 (MQ=255) cagcagCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATcc > 2:113479/1‑149 (MQ=255) gcagcCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATcccc < 4:51153/149‑1 (MQ=255) ccccAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCcaca < 1:102276/149‑1 (MQ=255) ccccAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCcac > 6:268272/1‑148 (MQ=255) cccAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCcaca > 8:23499/1‑148 (MQ=255) ccAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACaaa > 8:258430/1‑149 (MQ=255) ccAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACaaa > 4:284053/1‑149 (MQ=255) ccACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGGCGCGGGGTGCGTATCCCCCACAAATACg < 1:209120/148‑1 (MQ=255) cacaAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGcc > 4:365008/1‑149 (MQ=255) acaAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCg > 1:69165/1‑121 (MQ=255) acaAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCg < 2:69165/121‑1 (MQ=255) acaAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCct > 3:192490/1‑149 (MQ=255) aaTCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCctgct < 3:284053/149‑1 (MQ=255) ccTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGccc < 7:345494/149‑1 (MQ=255) cAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCAcc < 4:170225/76‑1 (MQ=255) gCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCCTGGGGGTTTTCTGAGACGGGTGATTTAATTACCATGG‑GCGGGGTGCTTATCCCCAACAAATACGCCCTGCTGGCCCACt > 1:307984/1‑149 (MQ=255) gCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGAc < 7:258430/149‑1 (MQ=255) cAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACg < 1:225930/149‑1 (MQ=255) cAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACg < 5:268272/149‑1 (MQ=255) cAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACg < 5:185710/149‑1 (MQ=255) cAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACg < 5:191071/149‑1 (MQ=255) gTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTg > 6:45516/1‑149 (MQ=255) gAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGAc < 6:293274/148‑1 (MQ=255) tCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGcc < 7:214586/130‑1 (MQ=255) tCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGcc > 8:214586/1‑130 (MQ=255) tCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGACGtgc < 1:18396/149‑1 (MQ=255) aCGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGACGtgctg < 5:74692/149‑1 (MQ=255) ccTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGACGtgctgctgc < 3:365008/149‑1 (MQ=255) cTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTAACCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGAAGTGCTCCAGCACGcc > 5:225906/1‑149 (MQ=255) cTCATTCAGGGCGTTTTC‑TATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGACGTGCAGCAGCACgtca < 8:188276/149‑4 (MQ=255) | CTTCATCGAGGAGCACCTGCGCCATCATGCGGTGGCACTGGGGCGGGTTTAACGCCTCCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCACAGCAGCCCCAATCCCACAAATCCCCTGCAAAGCAGGTAGAATCACGCCCTGACTCATTCAGGGCGTTTTCTTATGCGTATTGGCCACGGCTACGATGTGCACCG‑‑‑‑TTTCTGCGAC‑GGTGATTTCATTACCCTGG‑GCGGGGTGCGTATCCCCCACAAATACGGCCTGCTGGCCCACTCCGACGGTGACGTGCTGCTGCACGCCC > NC_002947/1814449‑1814742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |