| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,953,403 | G→A | 9.2% | R46R (CGC→CGT) ‡ | mnmC ← | methyltransferase/FAD‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,953,403 | 0 | G | A | 9.2% | 245.3 / 8.7 | 86 | R46R (CGC→CGT) ‡ | mnmC | methyltransferase/FAD‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (39/39); new base A (4/4); total (43/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTGACGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCATGGTGGG > NC_002947/1953259‑1953546 | gCTGACGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCggg > 6:345704/1‑149 (MQ=255)gCTGACGAAGTGCAGGCGCGCGTCGCTGTGGGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCggg < 4:234227/149‑1 (MQ=255) ggcGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCt > 2:107202/3‑149 (MQ=255) gACGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCt > 3:97066/1‑149 (MQ=255) cGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAACAATTCATGCCGGTGCCAAACCCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGGTGGCAAAACGCTCGGCCAGGCGGGTCTgg > 5:273223/1‑149 (MQ=255) cGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTgg < 3:279118/149‑1 (MQ=255) gCAGGCGCGCGTCGCGGGGTGCGTGCTGGTCGAACACCTGCCATGCGCAGTAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGACCCGCCTGGCCGAg < 1:6842/148‑1 (MQ=255) cgcgcgTCGCTGTGTGCGTGCTGGTCAAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAacac < 7:3352/149‑1 (MQ=255) gcgcgTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACg > 1:2387/1‑149 (MQ=255) gcgcgTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACg > 1:8599/1‑149 (MQ=255) gCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTg < 4:287429/148‑1 (MQ=255) tgtgCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tc < 2:8599/149‑1 (MQ=255) tgtgCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tc < 4:104753/149‑1 (MQ=255) tgtgCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tc < 2:2387/149‑1 (MQ=255) gtgcgtgcTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tct > 1:264969/1‑149 (MQ=255) cgtgcTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tcttc > 1:48321/1‑148 (MQ=255) cgtgcTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tcttc > 2:42001/1‑148 (MQ=255) gcTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATg > 8:195808/1‑149 (MQ=255) tGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGGTGcc > 3:29437/1‑149 (MQ=255) gAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCg < 7:195808/148‑1 (MQ=255) gAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGt > 7:102138/1‑149 (MQ=255) aaCAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGtt < 1:107202/149‑1 (MQ=255) aaCAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTG‑TCTTCGATGCCTTCGtt > 8:183480/1‑149 (MQ=255) aaCAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGACCCGCCTGGCCGAgc > 6:286948/1‑116 (MQ=255) gCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGc > 5:267150/1‑148 (MQ=255) gCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGc > 4:26143/1‑148 (MQ=255) ccAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCTGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tcttc < 3:3941/129‑1 (MQ=255) ccAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTt‑tcttc > 4:3941/1‑129 (MQ=255) ccAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCAGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCg > 2:112318/1‑148 (MQ=255) cAGGCGCAGAAAAAATTCCTGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGaa < 6:273223/149‑1 (MQ=255) cAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGaa < 5:345704/149‑1 (MQ=255) gcAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTC‑TCTTCGATGCCTTCGTTGACTGCGAAATAGa < 7:183480/149‑1 (MQ=255) gAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGAcgt > 6:323863/1‑149 (MQ=255) ttCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATa < 4:97066/149‑1 (MQ=255) ttCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACAAGTGCTTGGTT‑TCTTCGATGCATTCGTTGACTGCGAATTAGACGTCGTCa > 4:236228/1‑147 (MQ=255) aTGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGt < 1:48714/148‑1 (MQ=255) gCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGcc > 7:72019/1‑149 (MQ=255) cGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATa > 8:48564/1‑130 (MQ=255) cGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATa < 7:48564/130‑1 (MQ=255) cGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCcgc < 2:48321/149‑1 (MQ=255) cGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTAGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCcgc > 3:10856/1‑149 (MQ=255) ccAAAACCGGTTTCGCCGATCCCCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAAt < 6:27353/148‑1 (MQ=255) cAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGGTGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATgg < 4:29437/149‑1 (MQ=255) cAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGAc > 3:261690/1‑127 (MQ=255) cAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGAc < 4:261690/127‑1 (MQ=255) cAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCAGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATgg < 1:112318/149‑1 (MQ=255) aaaaCCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGa < 2:214635/101‑1 (MQ=255) aaaaCCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGa > 1:214635/1‑101 (MQ=255) aaaaCCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGtt > 5:239777/1‑111 (MQ=255) aaaaCCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGtt < 6:239777/111‑1 (MQ=255) aaCCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATggggg < 1:42001/149‑1 (MQ=255) cGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTg < 2:162062/148‑1 (MQ=255) gCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgt > 3:80309/1‑149 (MQ=255) ccGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgtc > 8:260905/1‑149 (MQ=255) ccGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgtc > 8:265944/1‑149 (MQ=255) aTCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgtcgtc > 6:210348/1‑149 (MQ=255) aTCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgtcgtc < 7:227725/149‑1 (MQ=255) tCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTcc < 7:265944/149‑1 (MQ=255) tCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTcc < 7:260905/149‑1 (MQ=255) gTGCAGGCGTGCGGCGCCAGGTTTGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTc < 6:267150/149‑1 (MQ=255) tGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGAcgtc > 7:8013/1‑106 (MQ=255) tGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGAcgtc < 8:8013/106‑1 (MQ=255) aGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATc > 3:336546/1‑149 (MQ=255) gCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTg > 3:360513/1‑149 (MQ=255) gCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTg > 3:366372/1‑149 (MQ=255) gCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTg > 5:182897/1‑149 (MQ=255) gCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGACGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTg < 4:232482/131‑1 (MQ=255) gCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGACGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTg > 3:232482/1‑131 (MQ=255) cGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTgg < 2:264969/149‑1 (MQ=255) gcggcgCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGaaa < 8:118306/89‑1 (MQ=255) gcggcgCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGaaa > 7:118306/1‑89 (MQ=255) gcgcCAGGTTGGCAAAACGCGCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGc < 6:239116/149‑1 (MQ=255) gcCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTg > 5:243224/1‑149 (MQ=255) ggCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGaggagg < 5:323863/148‑1 (MQ=255) gCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTTGTCTTCCATGCCTACGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGCCGGCCCTGGTCGACCCAGTCGAGCTGGGCGTGCTGGAGGAggg > 1:88627/1‑149 (MQ=255) cAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTg > 4:309418/1‑149 (MQ=255) aaaaCGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTGGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTgg < 2:88627/149‑1 (MQ=255) cTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCAtgg < 5:389041/149‑1 (MQ=255) cTCGGCCAGACCCGCCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCAtgg > 1:356660/1‑149 (MQ=255) tCGGCCAGACCCGCCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTccccattc < 2:286805/117‑6 (MQ=255) tCGGCCAGACCCGCCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCAtg > 3:220175/1‑147 (MQ=255) tCGGCCAGACCCGCCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCAtg < 4:220175/147‑1 (MQ=255) gCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgtcgt > 2:265377/1‑106 (MQ=255) gCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGgtcgt < 1:265377/106‑1 (MQ=255) gCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCATGGTggg < 8:102138/149‑1 (MQ=255) gCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCATGGTggg < 3:26143/149‑1 (MQ=255) | GCTGACGAAGTGCAGGCGCGCGTCGCTGTGTGCGTGCTGGTCGAACAGCTGCCAGGCGCAGAAAAAATTCATGCCGGTGCCAAAACCGGTTTCGCCGATCACCGTGCAGGCGTGCGGCGCCAGGTTGGCAAAACGCTCGGCCAGGCGGGTCTGGCCGAGGAACACGTGCTTGGTT‑TCTTCGATGCCTTCGTTGACTGCGAAATAGACGTCGTCATAGTGCCGCGAATGGGGGCGGCCCTGGTCGTCCCAGTCGATCTGGGCGTGCTGGAGGAGGGTGGGCATGGTGGG > NC_002947/1953259‑1953546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |