Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,962,588 G→C 8.2% S284T (AGT→ACT)  PP_1760 → ABC transporter ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,962,5880GC 8.2% 194.2 / 6.4 61S284T (AGT→ACT) PP_1760ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base G (27/29);  new base C (2/3);  total (29/32)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.29e-01

GCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAACTGCTTAATC  >  NC_002947/1962440‑1962734
                                                                                                                                                    |                                                                                                                                                   
gcgcTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAg                                                                                                                                                     <  7:115087/149‑1 (MQ=255)
  gcTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTg                                                                                                                                                   >  7:121990/1‑149 (MQ=255)
    tAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGCAGGCCACTGGCACGGCCACTGGca                                                                                                                                                >  6:144075/1‑148 (MQ=255)
      gCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGCAGGCCACTGGCACGGCCACTGGcatc                                                                                                                                              >  1:227694/1‑146 (MQ=38)
       cGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCctg                                                                                                                                             <  8:60335/149‑1 (MQ=255)
         gAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCctgct                                                                                                                                           >  6:85867/1‑149 (MQ=255)
           tttccTGGATGGCATCGAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACACCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGt                                                                                                                                         >  4:217737/4‑149 (MQ=255)
            aCCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGtt                                                                                                                                        >  7:287223/1‑149 (MQ=255)
              ccTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTc                                                                                                                                       >  7:250099/1‑148 (MQ=255)
                  gATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGCAGGCCACTGGCACGGCCACTGGCATCGCTTTTCCattg                                                                                                                                  <  8:299880/149‑4 (MQ=25)
                  gATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGCAGGCCACTGGCACGGCCACTGGCATCGCTTTTCCatt                                                                                                                                   <  2:227694/148‑3 (MQ=25)
                      ccATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAACAGCAGGCCACTGGCACGGCCACTGGCATCGCTTTTCCattgcga                                                                                                                               <  5:144075/148‑7 (MQ=21)
                       cATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCg                                                                                                                                >  1:17591/1‑146 (MQ=255)
                       cATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCg                                                                                                                                <  2:17591/146‑1 (MQ=255)
                          ccAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCAGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCg                                                                                                                          <  7:362637/149‑1 (MQ=255)
                             ggAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTgg                                                                                                                                                  <  4:272905/123‑1 (MQ=255)
                             ggAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTgg                                                                                                                                                  >  3:272905/1‑123 (MQ=255)
                             ggAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTg                                                                                                                                                   >  4:42050/1‑122 (MQ=255)
                                aaTCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGATCGGCATCGACATc                                                                                                                     <  8:250099/148‑1 (MQ=255)
                                 aTCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACAt                                                                                                                      <  7:194743/146‑1 (MQ=255)
                                 aTCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACAt                                                                                                                      >  8:194743/1‑146 (MQ=255)
                                 aTCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCtt                                                                                                                   <  1:242703/149‑1 (MQ=255)
                                 aTCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCtt                                                                                                                   <  7:186254/149‑1 (MQ=255)
                                             aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCggcggc                                                                                                       >  1:101096/1‑149 (MQ=255)
                                             aaCCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCggcggc                                                                                                       >  2:87521/1‑149 (MQ=255)
                                                 gCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATg                                                                                                   >  1:118354/1‑149 (MQ=255)
                                                              ccTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGAACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTg                                                                                       <  7:206714/148‑1 (MQ=255)
                                                              ccTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACACCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTg                                                                                       <  3:217737/148‑1 (MQ=255)
                                                               cTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGtt                                                                                     <  2:258801/149‑1 (MQ=255)
                                                                   gccgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTcc                                                                                 >  4:131103/1‑149 (MQ=255)
                                                                   gccgccTGGGCGTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTc                                                                                  <  6:365635/148‑1 (MQ=255)
                                                                    ccgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGtttt                                                                                   <  2:238403/146‑1 (MQ=255)
                                                                    ccgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGtttt                                                                                   >  1:238403/1‑146 (MQ=255)
                                                                     cgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGa                                                                               <  4:207051/149‑1 (MQ=255)
                                                                     cgccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGa                                                                               <  1:87521/149‑1 (MQ=255)
                                                                      gccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGAc                                                                              <  5:85867/149‑1 (MQ=255)
                                                                      gccTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGAc                                                                              >  8:330857/1‑149 (MQ=255)
                                                                        cTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCt                                                                            <  8:121990/149‑1 (MQ=255)
                                                                           ggCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGt                                                                          <  8:287223/148‑1 (MQ=255)
                                                                                     cccGCGAGGTGCGCGATTACGCCGTGGAGTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGAc                                                                              >  1:215822/1‑134 (MQ=255)
                                                                                     cccGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGAc                                                                              <  2:215822/134‑1 (MQ=255)
                                                                                     cccGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCa                                                                <  3:131103/148‑1 (MQ=255)
                                                                                      ccGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCt                                                                                        >  4:48522/1‑123 (MQ=255)
                                                                                      ccGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGc                                                                  >  3:44801/1‑145 (MQ=255)
                                                                                           aGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTg                                                         <  4:44801/149‑1 (MQ=255)
                                                                                              tGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATc                                                                                                                           <  6:51571/80‑1 (MQ=255)
                                                                                              tGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATc                                                                                                                           >  5:51571/1‑80 (MQ=255)
                                                                                                   gATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTGCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGAGCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGgtgt                                                  >  7:329610/1‑148 (MQ=255)
                                                                                                    aTTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTc                                                <  2:101096/149‑1 (MQ=255)
                                                                                                    aTTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTc                                                <  2:55695/149‑1 (MQ=255)
                                                                                                       aCGCCGTGTACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAg                                              <  2:118354/148‑1 (MQ=255)
                                                                                                           cGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTAcc                                         >  2:173322/1‑149 (MQ=255)
                                                                                                                     cAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCAt                               >  7:6465/1‑149 (MQ=255)
                                                                                                                      aaTGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCAt                               >  3:150503/1‑148 (MQ=255)
                                                                                                                       aTGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGa                             >  7:10160/1‑149 (MQ=255)
                                                                                                                            aaaGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGt                        >  5:274603/1‑149 (MQ=255)
                                                                                                                              aGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTcc                      <  7:330857/149‑1 (MQ=255)
                                                                                                                                       aGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGc              >  6:211817/1‑148 (MQ=255)
                                                                                                                                            ccGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAACTGc        <  8:6465/149‑1 (MQ=255)
                                                                                                                                             cGTGCCAGGGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAACTGCt       <  5:21863/149‑1 (MQ=255)
                                                                                                                                              gTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAACTGCt       >  3:6673/1‑148 (MQ=255)
                                                                                                                                                  cAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAACTGCTTAATc  <  1:173322/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCGCTAGCGGAAACCCTCGATGCCATCCAGGAAATCCGCGCCGGCAACCGCCAGGGCTACTTCCTTGGCCGCCTGGGCTTGCGTGCCCGCGAGGTGCGCGATTACGCCGTGGACTCGCAATGGAAAAGCGATGCCAGTGGCCGTGCCAGTGGCCTGCTGTTCCAGTTCGGCATCGACATCTTCCGCGCGGCGGCCATGCTGACCGTGCTGTTTTCCGACCTGTCGATCGGCCAGATGCTGGCGGTGTTCAGCTACCTGTGGTTCATGATCGGTCCGGTGGAGCAACTGCTTAATC  >  NC_002947/1962440‑1962734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: