| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,012,339 | T→C | 7.3% | L561L (CTA→CTG) | PP_1793 ← | group 2 family glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,012,339 | 0 | T | C | 7.3% | 239.5 / 6.9 | 82 | L561L (CTA→CTG) | PP_1793 | group 2 family glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (38/38); new base C (3/3); total (41/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
GCTATCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATCCCGCCTTGAT > NC_002947/2012195‑2012484 | gCTATCCCGGTGCCAGACAAGAGCGAGGGTAGAATCAGCCCCTGTGCCGGCATGAATGTGTAGCGTATTACCTTCCTCCATCTGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAgc < 7:193549/148‑1 (MQ=255) tATCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGA‑CGCGCTACAGc‑‑gcg > 5:280720/1‑149 (MQ=255) tATCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGA‑CGCGCTACAGc‑‑gcg > 5:349012/1‑149 (MQ=255) aTCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGt > 4:335838/1‑149 (MQ=255) tCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGA‑CGCGCTACAGc‑‑gcgcc < 6:280720/149‑3 (MQ=255) tCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGA‑CGCGCTACAGc‑‑gcgcc < 6:349012/149‑3 (MQ=255) ccGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTccc > 5:365166/1‑149 (MQ=255) tGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGc < 3:79149/149‑1 (MQ=255) cAGACAAGAGAGAGGGTAGAATCAGCCAATGTGCCGTAATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGAGAAGCGGGACAGTCGGG‑CGCGCTGTAGA‑‑GCGTACCGGGCAGc > 6:12317/1‑149 (MQ=255) agagagagGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGAt < 7:203524/149‑1 (MQ=255) gagagagGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATc > 8:145144/1‑149 (MQ=255) gagagagGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATc < 4:247932/149‑1 (MQ=255) gagagGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCg < 6:342125/148‑1 (MQ=255) agGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTc > 6:386926/1‑149 (MQ=255) ggTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTccc > 6:366274/1‑149 (MQ=255) aTCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGGACGCGCTACAGC‑‑GCGccc < 8:282389/122‑1 (MQ=255) aTCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGGACGCGCTACAGC‑‑GCGccc > 7:282389/1‑122 (MQ=255) tCAGCCCATGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGACAGTCGCG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGc > 2:225326/1‑148 (MQ=255) tCAGCCACTGTTCCGTAATGTATGTGTAGCGTTTTACCTGCCTCCATGGGGGATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAATGGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTGCCGGGCAGCTTTGATCGGGTCCCGCAGGCa < 8:23946/149‑1 (MQ=255) tgCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCAc < 3:190484/147‑1 (MQ=255) gCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCggg < 4:360244/127‑1 (MQ=255) gCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCggg > 3:360244/1‑127 (MQ=255) gAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGc > 6:365173/1‑109 (MQ=255) gAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGc < 5:365173/109‑1 (MQ=255) aaTGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGcc > 5:234506/1‑148 (MQ=255) tgtgTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCg > 1:240639/1‑147 (MQ=255) tAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAgcgc > 6:46403/1‑149 (MQ=255) cGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTg < 6:217640/149‑1 (MQ=255) gTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACtata > 7:217928/1‑131 (MQ=255) gTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACtata < 8:217928/131‑1 (MQ=255) ttACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGa > 6:191171/1‑147 (MQ=255) ccTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGTGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCgg > 3:45340/1‑101 (MQ=255) ccTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGTGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCgg < 4:45340/101‑1 (MQ=255) tGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgcggc > 8:30485/1‑149 (MQ=255) cTCCATCGGCCATTGCGAGGCTTTTTGTGCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgcggcggc < 6:217868/149‑1 (MQ=255) cATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGgcgc > 6:12944/1‑148 (MQ=255) aTCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCaa < 1:151680/149‑1 (MQ=255) cGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTg > 5:65674/1‑119 (MQ=255) cGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTg < 6:65674/119‑1 (MQ=255) ggCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGa < 7:145144/148‑1 (MQ=255) gCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGCTa < 2:240639/149‑1 (MQ=255) cATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgcggcggc > 3:314059/1‑139 (MQ=255) cATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgcggcggc < 8:143270/139‑1 (MQ=255) cATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgcggcggc < 4:314059/139‑1 (MQ=255) cATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgcggcggc > 7:143270/1‑139 (MQ=255) gCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCgtt < 5:366274/148‑1 (MQ=255) gCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACGATAGCGTGCCGAAGCGcca > 2:360401/1‑121 (MQ=255) gAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGCTGGCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCgttg > 1:294645/1‑149 (MQ=255) gAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCgttgtt > 8:311079/1‑149 (MQ=255) aGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGttgttg > 5:114484/1‑149 (MQ=255) ggCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTtgttgt < 1:275218/149‑1 (MQ=255) cTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTtgtgt < 5:386926/149‑1 (MQ=255) cTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTtgtgt < 6:234506/149‑1 (MQ=255) tttGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTtgtgtg < 7:30485/147‑1 (MQ=255) gTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgc > 6:353626/1‑117 (MQ=255) gTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAgc < 5:353626/117‑1 (MQ=255) ttCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGAcgc > 6:241579/1‑149 (MQ=255) aTCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGCG‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGAcgcg > 1:73332/1‑148 (MQ=255) aTCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGAcgcg > 3:143970/1‑147 (MQ=255) tCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAg < 5:241579/149‑1 (MQ=255) gCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAgtg < 5:191171/149‑1 (MQ=255) ctctGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAgtgt > 3:178436/1‑149 (MQ=255) tgttgtGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGtt < 3:335838/147‑1 (MQ=255) ttgtGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGtttttt > 7:293455/1‑149 (MQ=255) gtgCGTAGCTGGCCAGTCGGG‑CGGGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCGCGCAGGCAAAACGCACTATATCGTGCCGAAGCGCCTTGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTc < 1:225326/148‑1 (MQ=255) tgCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTc < 3:339318/147‑1 (MQ=255) tgCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTc > 4:339318/1‑147 (MQ=255) cGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGcc < 4:143970/149‑1 (MQ=255) gAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGccc > 5:361136/1‑149 (MQ=255) aGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGCCGCGCAGTGTTTTTTCCGcccc > 6:87844/1‑148 (MQ=255) ggCCAGTCGGT‑CGCGCTGTAGC‑‑GCGTCCCGGGCATCTTTGATCTGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGAAGCGCAGTGTTTTTTCCGCCCCgaaag < 5:12317/149‑1 (MQ=255) ggCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCga > 5:158413/1‑146 (MQ=255) ggCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCga > 2:127997/1‑146 (MQ=255) gTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATc < 6:365166/149‑1 (MQ=255) gTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATc < 6:158413/149‑1 (MQ=255) tCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATcc > 4:113098/1‑149 (MQ=255) ggg‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATCCCg > 6:239732/1‑149 (MQ=255) ggg‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATCCCg < 6:114484/149‑1 (MQ=255) g‑cgcgcTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTc > 7:325193/1‑128 (MQ=255) g‑cgcgcTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTc < 8:325193/128‑1 (MQ=255) gcgcTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATCCCGCCtt < 1:127997/149‑1 (MQ=255) cTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATCCCGCCTTGAt < 5:46403/149‑1 (MQ=255) | GCTATCCCGGTGCCAGACAAGAGAGAGGGTAGAATCAGCCCCTGTGCCGTCATGAATGTGTAGCGTATTACCTGCCTCCATCGGCCATTGCGAGGCTTTTTGTTCATCGCTCTGTTGTGCGAAGCGGGCCAGTCGGG‑CGCGCTGTAGC‑‑GCGTCCCGGGCAGCTTTGATCGGGTCCCGCAGGCAAAACGCACTATAGCGTGCCGAAGCGCCTGGATAGCGGCGGCGCAAGATAGCGTTGTTGTGTGCGACGCGCAGTGTTTTTTCCGCCCCGAAAGAAATCCCGCCTTGAT > NC_002947/2012195‑2012484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |