Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,034,007 G→T 7.3% K496N (AAG→AAT) ‡ pgi‑I → glucose 6‑phosphate isomerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,034,0070GT 7.3% 178.5 / 3.9 63K496N (AAG→AAT) ‡pgi‑Iglucose 6‑phosphate isomerase
Reads supporting (aligned to +/- strand):  ref base G (28/30);  new base T (3/2);  total (31/32)
Fisher's exact test for biased strand distribution p-value = 6.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AAAGGCCTCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATC  >  NC_002947/2033870‑2034154
                                                                                                                                         |                                                                                                                                                   
aaaGGCCTCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTa                                                                                                                                            >  1:204834/1‑147 (MQ=32)
 aaGGCCTCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACa                                                                                                                                          <  7:331014/148‑1 (MQ=32)
 aaGGCCTCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAACACCTTGTGCTCGTAc                                                                                                                                           <  5:129246/147‑1 (MQ=11)
      cTCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGt                                                                                                                                    >  4:44442/1‑149 (MQ=32)
       tCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGc                                                                                                                                      >  4:344312/1‑146 (MQ=32)
       tCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGc                                                                                                                                      <  3:344312/146‑1 (MQ=32)
       tCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGt                                                                                                                                    >  2:316248/1‑148 (MQ=32)
             aaGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTgg                                                                                                                             >  3:136198/1‑149 (MQ=32)
               gCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTgggg                                                                                                                           <  7:341959/149‑1 (MQ=32)
                   aCATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATc                                                                                                                       <  5:87745/149‑1 (MQ=32)
                   aCATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAACACCTTGTGCTCGTACatg                                                                                                                                        <  1:70801/132‑3 (MQ=11)
                   aCATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAACACCTTGTGCTCGTACatg                                                                                                                                        >  2:70801/1‑130 (MQ=11)
                      tCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAAc                                                                                                                    <  2:204834/149‑1 (MQ=32)
                      tCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACAGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAAc                                                                                                                    >  4:234725/1‑149 (MQ=17)
                                 gCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCa                                                                                                         <  3:44442/149‑1 (MQ=32)
                                        acaAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGc                                                                                                  >  2:46492/1‑149 (MQ=32)
                                           aGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTc                                                                                               <  7:296280/149‑1 (MQ=32)
                                                aTCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGc                                                                                           >  8:115633/1‑148 (MQ=32)
                                                aTCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGc                                                                                           <  7:115633/148‑1 (MQ=32)
                                                 tCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTg                                                                                         >  6:116380/1‑149 (MQ=32)
                                                 tCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTg                                                                                         >  3:317579/1‑149 (MQ=32)
                                                  cccGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGACTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTgg                                                                                        <  4:203590/149‑1 (MQ=17)
                                                   ccGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTgg                                                                                        <  5:116380/148‑1 (MQ=32)
                                                   ccGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTgg                                                                                        <  8:270203/148‑1 (MQ=32)
                                                      ggTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCaa                                                                                    <  5:339482/149‑1 (MQ=32)
                                                        tAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAgg                                                                                  <  7:184582/149‑1 (MQ=32)
                                                         aaCCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAgg                                                                                  <  6:213824/148‑1 (MQ=32)
                                                               ccGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTTCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGTTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTggg                                                                           <  3:216347/149‑1 (MQ=21)
                                                                       cacaTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTggg                                                                                                                            >  8:265774/1‑92 (MQ=33)
                                                                       cacaTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTggg                                                                                                                            <  7:265774/92‑1 (MQ=33)
                                                                        acaTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGTGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTgg                                                                            <  2:162659/139‑1 (MQ=21)
                                                                        acaTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTgg                                                                            >  1:162659/1‑139 (MQ=34)
                                                                         caTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGc                                                                                           >  7:97971/1‑123 (MQ=31)
                                                                         caTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGc                                                                                           <  8:97971/123‑1 (MQ=31)
                                                                         caTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGtt                                                                 >  6:119182/1‑149 (MQ=35)
                                                                          aTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGttt                                                                <  4:237683/149‑1 (MQ=35)
                                                                          aTTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGtt                                                                 >  3:237683/1‑148 (MQ=35)
                                                                                 gtCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAgc                                                          <  4:136198/148‑1 (MQ=34)
                                                                                    gAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCtt                                                      >  7:175578/1‑149 (MQ=34)
                                                                                      gcgcATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTgg                                                    >  1:6365/1‑149 (MQ=34)
                                                                                      gagcATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGAACTAGCACAAGGTGTTCGTACAGAGAGATATCTCGGGTATCAACGCCTTCGATCAGTGGGGCGACGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGAGCTTgg                                                    >  5:341580/3‑149 (MQ=11)
                                                                                       cgcATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGGGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGt                                                   <  7:65434/149‑1 (MQ=21)
                                                                                          aTCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCgg                                                >  6:193388/1‑149 (MQ=34)
                                                                                          aTCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCgg                                                >  2:304581/1‑149 (MQ=34)
                                                                                                  gcgcCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTgg                                        <  4:162428/149‑1 (MQ=34)
                                                                                                  gcgcCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTg                                         >  3:162428/1‑148 (MQ=34)
                                                                                                    gcCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGTTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGaa                                      <  3:234725/149‑1 (MQ=21)
                                                                                                     ccGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAg                                     <  2:6365/149‑1 (MQ=34)
                                                                                                     ccGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGATATCAGGGGTATCAACGCCTACGATCAGTTGGGCGTCGAGCTGACCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTgg                                        >  2:352321/1‑146 (MQ=11)
                                                                                                      cGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGa                                    <  1:46492/149‑1 (MQ=34)
                                                                                                                   tggtggCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGAc                       >  3:260371/1‑149 (MQ=34)
                                                                                                                        gctctGTACGAACACCTTGTGCTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTc                  >  1:81475/5‑149 (MQ=11)
                                                                                                                          tctGTACGAACACCTTGTGCTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCa                >  6:3172/3‑149 (MQ=11)
                                                                                                                          cATGTACGATCAGATGGTGTTCGTACAGAGCTTTATCTGGTGTATCAACGCCTTCGATGAGTGGGTCGTCGAGCTGGGCAAGTAACTGTGCAAGAGCGTTTACCTGCGCTTGGTCGGTGGCCTGGAAGACAGCGCCGAAGACGGTTCCa                <  1:352321/149‑1 (MQ=11)
                                                                                                                                 gAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAgcg                               <  5:76043/127‑1 (MQ=35)
                                                                                                                                 gAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAgcg                               >  6:76043/1‑127 (MQ=35)
                                                                                                                                 gAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCAc               <  6:342037/143‑1 (MQ=34)
                                                                                                                                 gAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCAc               >  5:342037/1‑143 (MQ=34)
                                                                                                                                   gCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGcc       >  1:381115/1‑149 (MQ=34)
                                                                                                                                    cacaAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGt                                                   <  4:184273/104‑1 (MQ=35)
                                                                                                                                    cacaAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGt                                                   >  3:184273/1‑104 (MQ=35)
                                                                                                                                       aaGGTGTTCGTACAGAGCTTTATCTGGTGTATCAACGCCTTCGATCAGTGGTGCTTCGAGATTGGCAAGGAACTGGGCTAGAGCTTTTACCTGCGCTTGGTCGGTAGCGTGTAAGACTGCGCCTAATACGGTTCCACCCAATTCCTGAt   <  6:341580/149‑1 (MQ=11)
                                                                                                                                       aaGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGAt   >  5:37249/1‑149 (MQ=34)
                                                                                                                                         ggTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATc  >  1:328560/1‑148 (MQ=34)
                                                                                                                                         |                                                                                                                                                   
AAAGGCCTCAACGAAGCAGACATCGAAAAGCTGGCCCCGCACAAGGTGATCCCGGGTAACCGCCCGAGCAACACATTGGTGGTCGAGCGCATCAGCCCGCGCCGGCTGGGTGCGCTGGTGGCCATGTACGAGCACAAGGTGTTCGTACAGAGCGTTATCTGGGGTATCAACGCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGGAACTGGGCAAGAGCGTTTACCAGCGCTTGGTCGGTAGCCTGGAAGACAGCGCCGAAGACGGTTCCACCCAAGGCCTGATC  >  NC_002947/2033870‑2034154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: