| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,049,304 | A→C | 6.0% | intergenic (‑33/+27) | PP_1822 ← / ← folEA‑I | hypothetical protein/GTP cyclohydrolase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,049,304 | 0 | A | C | 6.0% | 249.4 / 4.9 | 79 | intergenic (‑33/+27) | PP_1822/folEA‑I | hypothetical protein/GTP cyclohydrolase I |
| Reads supporting (aligned to +/- strand): ref base A (36/38); new base C (3/2); total (39/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.36e-01 | |||||||||||
CTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGCATCATCATG > NC_002947/2049157‑2049445 | cTTGCTCGATGTGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGaa < 1:8813/149‑1 (MQ=255)cTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGaa < 8:347670/149‑1 (MQ=255) gCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAggg > 7:3975/1‑149 (MQ=255) gCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAgg < 6:282202/148‑1 (MQ=255) gggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTTCAGGGTCGGCtttt < 4:306553/149‑4 (MQ=255) gggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCgg > 5:361981/1‑149 (MQ=255) ggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCggg < 3:281558/149‑1 (MQ=255) ggCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCggg < 1:157989/149‑1 (MQ=255) cTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCCACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGc > 5:283950/1‑148 (MQ=255) tGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCa < 8:315473/149‑1 (MQ=255) gcggcggcgTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCa < 8:129904/149‑1 (MQ=255) gcggcggcgTCGCGTTTGCGCTTGGCC‑GGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CAAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTTAAATGCAAACGCCGACCCTTAAGGGTCGGCTCGGGGCCAGCaa < 2:185810/149‑1 (MQ=255) cggcggcgTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGGAACAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGc > 1:117316/1‑148 (MQ=255) ggcggcgTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAAc < 5:70531/149‑1 (MQ=255) gcggcgTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACTATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAAcc < 8:3975/149‑1 (MQ=255) gcgTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACt < 6:371249/148‑1 (MQ=255) tttGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGa > 3:11921/1‑148 (MQ=255) tttGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCAGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGa > 6:75787/1‑148 (MQ=255) cgcTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTc > 1:333360/1‑116 (MQ=255) cgcTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTc < 2:333360/116‑1 (MQ=255) gcTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGc > 1:183142/1‑149 (MQ=255) ggCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGa < 7:187015/148‑1 (MQ=255) ggCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGa < 7:176935/148‑1 (MQ=255) ggCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGa < 6:361981/148‑1 (MQ=255) cGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCAc > 6:364369/1‑132 (MQ=255) cGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCAc < 5:364369/132‑1 (MQ=255) gggCGGCTGATCCAGTCACCGAAAACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAAc > 7:239080/1‑149 (MQ=255) gcggcTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTc < 4:11921/149‑1 (MQ=255) cggcTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGAt < 7:307733/133‑1 (MQ=255) cggcTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGAt > 8:307733/1‑133 (MQ=255) tCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCggg < 8:239080/149‑1 (MQ=255) aGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCGACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTgg > 3:150833/1‑149 (MQ=255) aCCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑t > 2:185886/1‑125 (MQ=255) aCCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑t < 1:185886/125‑1 (MQ=255) aCCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTggcggc > 2:265245/1‑149 (MQ=255) ccGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTg < 2:81561/137‑1 (MQ=255) ccGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTg > 1:81561/1‑137 (MQ=255) atctaTGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTc < 5:323501/145‑1 (MQ=255) gATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTAGATCAGCC‑TGAGGAACTCGCTGCGGGTGGCGGCGGTGTcgcg > 5:59746/1‑149 (MQ=255) tGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTc > 6:323501/1‑144 (MQ=255) aGCTGGCCGAGG‑TCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGaa < 2:117316/148‑1 (MQ=255) aGCTGGCCGAGG‑CCAACCCGCAGGTCTGTGACGATCATGGGCAACTCCTGAAATTCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGaa < 6:283950/148‑1 (MQ=255) gCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCATCAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGTCCAGCAACCAATAACTTGATCAGGC‑TGACCAACTCCCTGCGGGTGGCGTCGTTGTCGCGCAACt > 8:110208/1‑149 (MQ=255) gCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCTGGTGGCGGCGTTGTCGCGGAACTCAcc > 7:105249/1‑149 (MQ=255) cGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCAcc > 1:111048/1‑147 (MQ=255) aGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCTACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGc < 4:150833/149‑1 (MQ=255) aGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAg > 7:35322/1‑148 (MQ=255) aaCCAGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGa > 1:151875/1‑91 (MQ=255) aCCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCAcc < 8:35322/149‑1 (MQ=255) aCCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCAcc < 3:116176/149‑1 (MQ=255) gCAGGGCTTTGAGGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAgg > 1:253335/1‑149 (MQ=255) agtggtttGACGATCATGGCCAACTCTTGAAATGCAAAAGCCTACCCTTCAGGGTCGGCTCGGGGCCAGCAACCAATCAGTTGATCAGTC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATGACCGAGGTg < 6:59746/144‑1 (MQ=255) aGGGCTTTGATGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTg < 2:253335/149‑1 (MQ=255) gCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGAt > 7:323572/1‑148 (MQ=255) aCGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATGACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGt < 5:75787/148‑1 (MQ=255) aTGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTc > 1:351175/1‑149 (MQ=255) gCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCt < 1:265245/149‑1 (MQ=255) aaCTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtc < 2:111048/149‑1 (MQ=255) aCTCCTTAAATCCAAAACCCGACCCTCAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtct < 2:183142/149‑1 (MQ=255) cTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtctc < 4:299294/149‑1 (MQ=255) tCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAAACACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTCGCGGCGTTGTCGCGGAACTCACCCAGCATCACAGAGGTGATCATGGTCGAATTCTGCTtctc > 5:111508/1‑148 (MQ=255) ccTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCg > 4:205675/1‑148 (MQ=255) tGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTcgc > 5:259815/1‑96 (MQ=255) tGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtct < 6:134075/144‑1 (MQ=255) tGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtct > 5:134075/1‑144 (MQ=255) cccgaGCCGACCCTTCAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGca > 2:100180/5‑149 (MQ=255) aaaaGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCAc < 7:72997/107‑1 (MQ=255) aaaaGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCAc > 8:72997/1‑107 (MQ=255) aaaaGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtctc < 4:67867/137‑1 (MQ=255) aaaaGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTtctc > 3:67867/1‑137 (MQ=255) cgaGCCGACCCTTCAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGcat > 5:85666/3‑148 (MQ=255) gaGCCGACCCTTCAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGCATGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGcat > 1:289665/2‑148 (MQ=255) aaGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGcatca < 3:205675/149‑1 (MQ=255) cGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCa > 4:358603/1‑112 (MQ=255) cGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCa < 3:358603/112‑1 (MQ=255) cGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGcatcatcat < 5:311909/149‑1 (MQ=255) gACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGCATCATCATg > 5:236567/1‑149 (MQ=255) gACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGCATCATCATg > 2:81447/1‑149 (MQ=255) gACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCAATTGATCAGGC‑TGAGTAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGACGTGATCATGGTCGAATTCAGATTCTCGACACCGCGAATCATCATg > 4:327674/1‑149 (MQ=255) ccTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCgcgc > 4:41695/1‑137 (MQ=255) ccTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCgcgc < 3:41695/137‑1 (MQ=255) aaGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCa < 2:377316/86‑1 (MQ=255) aaGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCa > 1:377316/1‑86 (MQ=255) | CTTGCTCGATGCGGGCCTGGGCGGCGGCGTCGCGTTTGCGCTTGGCCGGGCGGCTGATCCAGTCACCGAAGACGATGAGCTGGCCGAGG‑CCAACCCGCAGGGCTTTGACGATCATGGGCAACTCCTGAAATGCAAAAGCCGACCCTGAAGGGTCGGCTCGGGGCCAGCAACCAATCACTTGATCAGGC‑TGAGGAACTCGCTGCGGGTGGCGGCGTTGTCGCGGAACTCACCCAGCATCACCGAGGTGATCATGGTCGAATTCTGCTTCTCGACACCGCGCATCATCATG > NC_002947/2049157‑2049445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |