| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,060,369 | T→A | 8.8% | N87I (AAC→ATC) | PP_1836 ← | ZIP family metal transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,060,369 | 0 | T | A | 8.8% | 228.3 / 10.3 | 79 | N87I (AAC→ATC) | PP_1836 | ZIP family metal transporter |
| Reads supporting (aligned to +/- strand): ref base T (39/33); new base A (4/3); total (43/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.93e-01 | |||||||||||
ATGCCCAGCACCACGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCCAGCAGTACG > NC_002947/2060222‑2060509 | aTGCCCAGCACCACGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGtt < 5:247063/149‑1 (MQ=255) cAGCACCACGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGCTGCGCGATgtc > 4:175020/1‑146 (MQ=255) aGCACCACGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTg < 7:5550/144‑1 (MQ=255) aGCACCACGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTg > 8:5550/1‑144 (MQ=255) ccacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATcgcg > 3:337968/1‑148 (MQ=255) ccacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCgcgc < 4:63926/149‑1 (MQ=255) cacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATcgcg > 8:17653/1‑147 (MQ=255) cacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATcgcg > 6:75811/1‑147 (MQ=255) cacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATcgcg > 4:359363/1‑147 (MQ=255) cacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATcgcg > 3:118235/1‑147 (MQ=255) cacGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCgca < 2:81984/149‑1 (MQ=255) gTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGcac < 3:112025/149‑1 (MQ=255) aCGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGCTGCGCGATGTCAACGCGC‑Gcacccag < 3:175020/149‑4 (MQ=255) cgcgGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCg > 8:292661/1‑149 (MQ=255) ggcggcCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCa < 5:75811/149‑1 (MQ=255) ccGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAACACGAGCTGGCGGCCC‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACg > 8:286732/1‑149 (MQ=255) gggCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGgc > 4:17065/1‑149 (MQ=255) gCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTAACATCGCGCAGCACCACCGCCAGCACGgcgc > 6:113481/1‑149 (MQ=255) gctGCCCGCGAGATCACGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGcc > 6:214897/3‑147 (MQ=255) aTTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCa < 4:118235/149‑1 (MQ=255) ccGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGATAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGtt < 4:121363/109‑1 (MQ=255) ccGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGtt > 3:121363/1‑109 (MQ=255) cGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCCGCACGGCGCCCAGTGCgg > 6:267894/1‑149 (MQ=255) tGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTg < 4:337968/149‑1 (MQ=255) tGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCACGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTg < 3:299123/149‑1 (MQ=255) tcGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCAGGCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGgcgc > 1:94511/1‑149 (MQ=255) tcGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGgcgc > 7:135236/1‑148 (MQ=255) gcgGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCa > 2:187951/1‑148 (MQ=255) cgGGCAGCCGCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCaaa < 8:57934/149‑1 (MQ=255) gCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTg > 4:268829/1‑96 (MQ=255) gCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTg > 6:12552/1‑133 (MQ=255) gCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTg < 5:12552/133‑1 (MQ=255) gCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGcc > 2:186119/1‑149 (MQ=255) gCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCACCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGa > 5:150853/1‑149 (MQ=255) gCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGACGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGa > 1:60952/1‑149 (MQ=255) tCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACaa > 1:354418/1‑149 (MQ=255) cAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAAcc > 6:146993/1‑149 (MQ=255) ccTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGcc < 2:186317/149‑1 (MQ=255) ggCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAg > 5:292318/1‑149 (MQ=255) gCAGAATCAGCGACAACGAGCTGGCGTCCA‑GCATCATGCCGGCAGCAAAGCCCAGCAGCACATCCTGGTGGC‑GCGAGTTGACATCGCGCTGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCa < 5:267894/147‑1 (MQ=255) gCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAg > 7:273716/1‑148 (MQ=255) gCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAg > 7:61320/1‑148 (MQ=255) gCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGc < 1:174006/149‑1 (MQ=255) gCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAgg > 4:280466/1‑149 (MQ=255) aaaaCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTg > 1:339829/1‑148 (MQ=255) aaaCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTg > 6:334014/1‑147 (MQ=255) aaCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAg < 7:360824/149‑1 (MQ=255) aaCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAg > 4:5056/1‑149 (MQ=255) aaCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAg < 3:5056/149‑1 (MQ=255) aCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAgg < 5:146993/149‑1 (MQ=255) aCGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAgg < 2:94511/149‑1 (MQ=255) gAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGtt < 3:17065/149‑1 (MQ=255) gcggcCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCg < 2:60952/147‑1 (MQ=255) gcggcCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCg < 7:17653/147‑1 (MQ=255) a‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGGGCAGGTTGTCGGCATGGTc < 7:286732/149‑1 (MQ=255) gCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTAACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCg < 5:113481/149‑1 (MQ=255) ccGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCAc > 3:7419/1‑149 (MQ=255) gcagcaAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACcgc < 8:135236/149‑1 (MQ=255) aaaGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCAt < 7:355911/105‑1 (MQ=255) aaaGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCAt > 8:355911/1‑105 (MQ=255) aGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTc > 6:382550/1‑146 (MQ=255) gCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCaga < 1:186119/149‑1 (MQ=255) cccAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCagag > 2:80408/1‑149 (MQ=255) cccAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCagag < 5:214897/149‑1 (MQ=255) ccAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAgg < 8:61320/149‑1 (MQ=255) cAGCAACACATCCTGGGTGC‑CCGCGTAGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACAGCGTTCCAGAGGc > 2:324729/1‑149 (MQ=255) cATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTgg < 8:118986/149‑1 (MQ=255) tCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTggcg > 4:169806/1‑149 (MQ=255) cacaTCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCa > 7:298716/1‑89 (MQ=255) cacaTCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCa < 8:298716/89‑1 (MQ=255) aTCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCAcc < 2:278344/127‑1 (MQ=255) aTCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCAcc > 1:278344/1‑127 (MQ=255) tCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCTACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCcag < 8:273716/149‑1 (MQ=255) tCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCcag < 5:382550/149‑1 (MQ=255) cTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCcag > 8:177134/1‑147 (MQ=255) tgctgcgcgATGTCAACGCGC‑GCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCCAGCAGTACg > 5:346154/5‑149 (MQ=255) gctgcgcgATGTCAACGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCca > 5:162245/4‑141 (MQ=255) gctgcgcgATGTCAACGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCca < 6:162245/138‑1 (MQ=255) gctgcgcgATGTCAACGCGC‑GCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCcagca < 5:27338/140‑1 (MQ=255) gctgcgcgATGTCAACGCGC‑GCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCcagca > 6:27338/4‑143 (MQ=255) cgTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAgg > 4:37448/1‑89 (MQ=255) cgTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAgg < 3:37448/89‑1 (MQ=255) | ATGCCCAGCACCACGGTAAACGCGGCGGCCGGGCCATTGCCCGTGATCTCGCGGGCAGCCTCCAGGCCTGGCAGAATCAGCGAAAACGAGCTGGCGGCCA‑GCATCATGCCGGCAGCAAAGCCCAGCATCACATCCTGGGTGC‑GCGCGTTGACATCGCGCAGCACCACCGCCAGCACGGCGCCCAGTGCGGTGGCGCCAAAGCCCGACAACCCGCCCAGCATGGCCAGGTGCAGGTTGTCGGCATGGTCGCCGTTCACCGCGTTCCAGAGGCTGGCGGCCAGCAGTACG > NC_002947/2060222‑2060509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |