| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,092,387 | T→C | 9.8% | intergenic (+33/+58) | deaD → / ← ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,092,387 | 0 | T | C | 9.8% | 193.1 / 9.5 | 71 | intergenic (+33/+58) | deaD/ygiD | ATP‑dependent DEAD‑box RNA helicase DeaD/4,5‑DOPA‑dioxygenase |
| Reads supporting (aligned to +/- strand): ref base T (32/32); new base C (3/4); total (35/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
ACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCA > NC_002947/2092239‑2092532 | aCAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGt > 1:167048/1‑149 (MQ=255) cttcagcttGGTCGAGCTGCCGGAAGACGGGCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCggg > 1:31406/1‑149 (MQ=255) cttcagcttGGTCGAGCTGCCGGAAGACGGCCTCGAGAATCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTTCCGCGATGATTGATCCTGGCGTAACGAAATAATCCCCGGCTTAGGTCgg < 4:307928/148‑1 (MQ=255) cttcagcttGGTCGAGATGCCGGAAGACGGCCTCGAGAAGCTCCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCAGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGCTCgg > 3:307928/1‑148 (MQ=255) ttcagcttGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCggg > 4:174770/1‑148 (MQ=255) agcttGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑tt < 3:95119/149‑1 (MQ=255) ttGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttt > 3:254982/1‑149 (MQ=255) ggTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttt < 2:29374/147‑1 (MQ=255) ggTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttt < 7:36862/147‑1 (MQ=255) ggTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttt < 6:369759/147‑1 (MQ=255) ggTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑tttttt < 2:28944/148‑1 (MQ=255) gAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTAc < 6:372021/148‑1 (MQ=255) gCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑ttttttcgttacg > 7:68969/1‑142 (MQ=38) ccGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTAc < 4:254982/148‑1 (MQ=255) gAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCGGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTATCGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTTCCAGTACCGGc > 8:311153/1‑149 (MQ=255) atataCGGCCTCGAGAAGCTGCTGTCCCAGCTCACGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTACCGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGc < 3:254859/145‑1 (MQ=255) aGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGccc < 4:254721/149‑1 (MQ=255) cGGCCTCGAGAAGCTGCTGTCAAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACTAAAAAATACCCGGCTTAGGTCGGGGA‑TTTTTTTTAACTGTACCGGc > 4:254859/1‑144 (MQ=255) ccTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTcgc > 8:151556/1‑149 (MQ=255) cTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAATAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTcgcg < 1:288845/149‑1 (MQ=255) gagaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTa < 8:308622/126‑1 (MQ=255) gagaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTa > 7:308622/1‑126 (MQ=255) gagaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCggg < 2:174809/148‑1 (MQ=255) gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCtt < 2:31406/149‑1 (MQ=255) gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCtt < 1:45452/149‑1 (MQ=255) gaAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCtt < 2:140210/149‑1 (MQ=255) tgctgTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcg > 1:174264/1‑149 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCcgcg > 5:330865/1‑146 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGaa < 2:167048/148‑1 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGa < 3:174770/147‑1 (MQ=255) tCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAag < 1:253412/149‑1 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGa < 3:107444/90‑1 (MQ=38) acTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGa > 4:107444/1‑90 (MQ=38) acTCGCGTGGCTGGCAAGCAGCTGAAGCCGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttt > 7:155191/1‑95 (MQ=255) acTCGCGTGGCTGGCAAGCAGCTGAAGCCGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑ttttt < 8:155191/95‑1 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTcgcg > 1:294737/1‑117 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTcgcg < 2:294737/117‑1 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTc > 7:133624/1‑114 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTc < 8:133624/114‑1 (MQ=255) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑tttt < 5:169633/92‑1 (MQ=38) tCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGACCTAAGCCGGGGA‑tttt > 6:169633/1‑92 (MQ=38) gTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGa > 4:337988/1‑148 (MQ=255) ctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTAc > 5:43062/1‑90 (MQ=255) ctggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTAc < 6:43062/90‑1 (MQ=255) ggcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATg > 8:311466/1‑148 (MQ=255) gcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGt < 7:311466/148‑1 (MQ=255) gcAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGt < 2:174264/148‑1 (MQ=255) cTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCa < 2:274635/149‑1 (MQ=255) aaGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAgcg > 3:309382/1‑149 (MQ=255) cGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGccc < 3:337988/148‑1 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCa < 1:42203/112‑1 (MQ=255) tCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCa > 2:42203/1‑112 (MQ=255) gCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAggg > 1:255474/1‑148 (MQ=255) ccGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAAc > 3:41163/1‑149 (MQ=255) gATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGAt < 8:39633/149‑1 (MQ=255) gATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGAt > 6:224345/1‑149 (MQ=255) ttGATGCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATg > 7:347076/1‑148 (MQ=255) tGATCCTGGCGTAACGAAAAAATCCCCGGGTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCATTTCGCGGGGTTGGCCGCGAAGAGGCCCTTCAGTCGAAACGATAGTTGTGCATCCCCAGCGCGCGCAGGGTAGACCACTGATGct > 1:300158/1‑148 (MQ=255) aTCCTGGCGTAACGAAAAAATCCGCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcac < 4:309382/148‑1 (MQ=255) tCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGcacca > 4:37292/1‑149 (MQ=255) tGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCa > 3:57335/1‑125 (MQ=255) tGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCa < 4:57335/125‑1 (MQ=255) tGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGc > 5:74930/1‑149 (MQ=255) gCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGcc > 6:373515/1‑148 (MQ=255) aaaaaTCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAgg > 8:2802/1‑72 (MQ=255) ccGGCTTAGGTCGGGGATTTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCt < 2:276528/119‑1 (MQ=255) ccGGCTTAGGTCGGGGATTTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCt > 1:276528/1‑119 (MQ=255) ccGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGccc > 4:315122/1‑148 (MQ=255) ggCTTAGGTCGTGGA‑TTTTTTTTACCTGTCCCGGCCCTTTCGCGGGCTTGCCCTCGAAGAGGCCCTTCAGTCGAACCGAAACATGTACATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 2:300158/149‑1 (MQ=255) ggCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCaa < 5:224345/149‑1 (MQ=255) aGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGc > 1:10593/1‑148 (MQ=255) ggTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCa > 5:139334/1‑148 (MQ=255) | ACAGCTTCAGCTTGGTCGAGCTGCCGGAAGACGGCCTCGAGAAGCTGCTGTCCAAGCTCAAGGACACTCGCGTGGCTGGCAAGCAGCTGAAGCTGCGTCGCTACCGCGAGGATTGATCCTGGCGTAACGAAAAAATCCCCGGCTTAGGTCGGGGA‑TTTTTTTTACCTGTACCGGCCCTTTCGCGGGCTTGCCCGCGAAGAGGCCCTTCAGTCGAACCGATAGATGTCCATCCCCAGCGCGCCCAGGGTAAACCCCTGATGCACCACGCCGAACTTGCTCCCGGCCCCAAGGGCA > NC_002947/2092239‑2092532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |