| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,166,235 | G→T | 5.3% | intergenic (‑79/‑702) | PP_5483 ← / → PP_1921 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,166,235 | 0 | G | T | 5.3% | 244.2 / 3.6 | 75 | intergenic (‑79/‑702) | PP_5483/PP_1921 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (34/37); new base T (2/2); total (36/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.83e-01 | |||||||||||
GGTACGCAAGCCACAAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTGCCCGGCC > NC_002947/2166090‑2166379 | ggTACGCAAGCCACAAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACcagcag < 5:55414/149‑1 (MQ=255)ggTACGCAAGCCACAAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACcagcag > 4:158551/1‑149 (MQ=255) cGCAAGCCACAAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAACGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGctc < 1:217202/148‑1 (MQ=255) aaGCCACAAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGt < 7:90212/149‑1 (MQ=255) caAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTa < 3:158551/149‑1 (MQ=255) caAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTa < 6:85843/149‑1 (MQ=255) aTACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCAt < 4:19668/149‑1 (MQ=255) aCGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATc > 1:333228/1‑149 (MQ=255) aCGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATc > 1:338281/1‑149 (MQ=255) ccAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAgtc < 4:365132/149‑1 (MQ=255) aaGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAgtcgt > 7:262926/1‑149 (MQ=255) aaGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCGATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAgtcgt > 4:100460/1‑149 (MQ=255) gaCCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACg > 5:252967/1‑149 (MQ=255) ccGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGtt < 5:111465/149‑1 (MQ=255) ttACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATAc > 6:27654/1‑149 (MQ=255) ttACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTAATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATAc > 1:254325/1‑149 (MQ=255) aaTCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATTAAATCGAGTCGTCACGTTTGATACTCtt > 2:290581/1‑149 (MQ=255) aaTCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCtt > 2:341467/1‑149 (MQ=255) aaTCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCtt < 6:252967/149‑1 (MQ=255) aTCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCTGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTg < 4:161675/149‑1 (MQ=255) aTCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTg < 1:341467/149‑1 (MQ=255) tCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTATTgg > 2:267659/1‑149 (MQ=255) ccAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTg > 2:17009/1‑145 (MQ=255) ccAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTg < 1:17009/145‑1 (MQ=255) cATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCt > 1:318606/1‑149 (MQ=255) aTGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATActc < 4:236067/128‑1 (MQ=255) aTGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATActc > 3:236067/1‑128 (MQ=255) aTGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCtt > 4:269713/1‑149 (MQ=255) aGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATcc < 5:9239/149‑1 (MQ=255) ggTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATTAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCt < 1:290581/149‑1 (MQ=255) cTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCt < 3:312317/148‑1 (MQ=255) cTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCt < 2:318606/148‑1 (MQ=255) tCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTa < 3:204857/131‑1 (MQ=255) tCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTa > 4:204857/1‑131 (MQ=255) ccATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTAc > 5:20673/1‑149 (MQ=255) cattcattGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAg < 6:9801/97‑1 (MQ=255) cattcattGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAg > 5:9801/1‑97 (MQ=255) attcattGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGTCTAGCCCCTTCATCCTGCTTAccc > 6:271566/1‑149 (MQ=255) attGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGtt < 7:333571/102‑1 (MQ=255) attGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGtt > 8:333571/1‑102 (MQ=255) ttGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGt < 6:20673/149‑1 (MQ=255) aTGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCg > 3:219951/1‑149 (MQ=255) gcTATTAGCCTACCTGTTCGGCTGGAGCTGCGGGATAGCTTGAGTGCCGCCACCAGCAGCTCTCTTGGAATAGCATAAAATCGAGTCGTGACGTTTGATACTCTTTGTATGCGGGTAGCACCTTCATCCTGCTTTCCCTAGGTCAGtt < 4:219951/147‑1 (MQ=255) ccTATTAGCCTACCAGTTAGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGtt < 1:174939/148‑1 (MQ=255) aTTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATc < 4:316387/125‑1 (MQ=255) aTTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATc > 3:316387/1‑125 (MQ=255) ttAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAg < 2:254325/147‑1 (MQ=255) tAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGa < 4:324835/79‑1 (MQ=255) tAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGa > 3:324835/1‑79 (MQ=255) cAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGa > 7:206781/1‑149 (MQ=255) cAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGa < 3:269713/149‑1 (MQ=255) aGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGAc < 8:262926/149‑1 (MQ=255) cGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGct > 1:5630/1‑149 (MQ=255) ggCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGctc > 8:41936/1‑149 (MQ=255) tGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTg > 8:201141/1‑148 (MQ=255) tGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTg > 8:195598/1‑148 (MQ=255) gAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTg < 7:195598/146‑1 (MQ=255) gAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTg < 7:201141/146‑1 (MQ=255) gAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTAGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTgcgc < 5:27654/149‑1 (MQ=255) aGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAgtgt > 5:129478/1‑129 (MQ=255) aGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAgtgt < 6:129478/129‑1 (MQ=255) gCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCt > 5:174833/1‑110 (MQ=255) gCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCt < 6:174833/110‑1 (MQ=255) gggAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGgacgac > 6:134715/1‑149 (MQ=255) gCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGa < 1:338277/47‑1 (MQ=255) gCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGa > 2:338277/1‑47 (MQ=255) cTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAgcg > 6:27091/1‑149 (MQ=255) ttGAGTGCCGCCACCATCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTc > 5:377537/1‑116 (MQ=255) ttGAGTGCCGCCACCATCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTc < 6:382701/116‑1 (MQ=255) ttGAGTGCCGCCACCATCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTc < 6:377537/116‑1 (MQ=255) ttGAGTGCCGCCACCATCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTc > 5:382701/1‑116 (MQ=255) aGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCTTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGt > 8:203227/1‑149 (MQ=255) tGCCGCCACCAGCAGCTCGCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTg < 3:100460/149‑1 (MQ=255) cgccACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTGccc < 2:333228/149‑1 (MQ=255) cgccACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTGccc < 2:338281/149‑1 (MQ=255) cgccACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTGccc > 6:32437/1‑149 (MQ=255) accaGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTGCCCGGcc < 8:206781/149‑1 (MQ=255) | GGTACGCAAGCCACAAAATACAAACGGGCCAAGAGACCGCGTTTACAATCCCCAAGGCAATTTCCATGTAAGGTGCTCCATTCATTGATGCCTATTAGCCTACCAGTTCGGCTGGAGCTGCGGGAAAGCTTGAGTGCCGCCACCAGCAGCTCTCGTGGCCTAGCATAAAATCGAGTCGTCACGTTTGATACTCTTGGTATGCGGCTAGCACCTTCATCCTGCTTACCCTAGGTCCGTTCAGTGTCGATGCGACGGCTCTGCGCGGACGACGGAAGCGCCGTTGCCCGGCC > NC_002947/2166090‑2166379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |