| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,224,235 | G→C | 10.3% | G104G (GGC→GGG) | PP_1962 ← | site‑specific recombinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,224,235 | 0 | G | C | 10.3% | 187.5 / 10.3 | 68 | G104G (GGC→GGG) | PP_1962 | site‑specific recombinase |
| Reads supporting (aligned to +/- strand): ref base G (28/33); new base C (3/4); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.34e-01 | |||||||||||
GCGATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTGGTATCTCT > NC_002947/2224087‑2224379 | gctaTAAGGAACTCCAAAATCGCAACATGAAAAACATGCCTGAATATTTACTCTTTTTTCCACTTGCTTTTGCTTCGTCGAGGGCCATATT‑AAGCATCT‑TAT‑TTGTTATGAGATCCAAGTTCTCAGGAATCGCTGAAAGCCTATTgggg < 8:354797/146‑1 (MQ=255) gATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGc < 7:130980/148‑1 (MQ=255) gATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGAGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TAGTTATTAGAAAAAAGTGATAATGAATCGCTGAAAGCATATTGGGGc > 3:206355/1‑148 (MQ=255) tAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCAGTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGcccc > 8:159422/1‑148 (MQ=255) gAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAg < 8:240764/149‑1 (MQ=255) gAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAg > 1:5921/1‑149 (MQ=255) aaGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAgg > 6:21358/1‑148 (MQ=255) ccAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGCaaa > 6:271382/1‑149 (MQ=255) aaaaTCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGCCCCAATAggctttca < 7:159422/149‑7 (MQ=255) aaaTCCCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGACGGCCCGATT‑AACCATCGCCAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGCCCCAATAggctttca < 1:303557/149‑7 (MQ=255) atagCAACATGAAAAACATTCCTTTATCATGACTAGGTTGTCCAATTGCTTTTGATGCTTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCg < 4:206355/146‑1 (MQ=255) gCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGAt < 3:3304/148‑1 (MQ=255) gCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATa < 3:188642/149‑1 (MQ=255) aaCATCAAAAAAAGGCCTGAATAATGCCTCGGATGAACACTTGCTTTTGCGTCGTCGAGGTCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGTAATCGCTGAATGCCTATTGGTGCCCAATAGGTAAATTTCGATaaa > 6:281240/1‑149 (MQ=255) aCATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAAc > 6:75924/1‑149 (MQ=255) aCATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGCAAATTTCGATAAAc < 5:271382/149‑1 (MQ=255) aTGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAACCTATTGGGGCCCAATAGGTAAATTTCGATAAAcc > 3:251756/1‑148 (MQ=255) aaaaCTGGCCTTAATTATTACTCTTTTGTACATTTTTTTTTGCGTTGTCGTGGCCCATCTTAAAGAATCG‑TATCTCCATATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGAt < 1:307970/149‑1 (MQ=255) ccTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAAtt < 2:13018/126‑1 (MQ=255) ccTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAAtt > 1:13018/1‑126 (MQ=255) cTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGAt > 4:366547/1‑149 (MQ=255) tGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTga > 1:345377/1‑145 (MQ=255) tGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTga < 2:345377/145‑1 (MQ=255) tGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGAtt > 7:260060/1‑149 (MQ=255) aataatGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTc > 4:333461/1‑149 (MQ=255) atGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCtt > 8:128147/1‑149 (MQ=255) tGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCttt < 2:210397/149‑1 (MQ=255) cTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGga > 6:52604/1‑149 (MQ=255) tCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGCGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGgat > 7:261883/1‑149 (MQ=255) cgtgggccACCTGCTGTTGCGGCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTAATGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGgat < 8:77809/141‑1 (MQ=255) gTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGgatgat < 8:260060/149‑1 (MQ=255) ttGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATa < 5:21358/149‑1 (MQ=255) cACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAg > 6:249670/1‑149 (MQ=255) ttGCATTTTCGTCGTCGAGGGCCCGATT‑TAGAATCG‑GAT‑TTGTTATTAGATCAAAGTGCTCATGATTCGCACAAAGAATATTGGGGCCCAATAGGTAAATTTCGATAAACCGATATTCGTGAGATTTCGCTTTGTATGATACGAAGGaa < 8:344165/149‑1 (MQ=255) gCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCT‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTAATgtgg < 8:236730/84‑1 (MQ=255) gCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAAc > 6:348421/1‑148 (MQ=255) gCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAAc < 5:348421/148‑1 (MQ=255) gCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTAATgggg > 7:236730/1‑84 (MQ=255) ttttGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGaa > 5:142265/1‑149 (MQ=255) ttttGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGaa > 5:166110/1‑149 (MQ=255) gCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATAc < 7:128147/148‑1 (MQ=255) gtcgtcGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGAt < 3:366547/149‑1 (MQ=255) gtcgtcGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGAt > 3:304724/1‑149 (MQ=255) tcgAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTg > 3:212202/1‑147 (MQ=255) gAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAgg < 5:75924/149‑1 (MQ=255) gAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAgg < 7:283633/149‑1 (MQ=255) gggCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGa < 2:5921/149‑1 (MQ=255) ggCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAg < 5:249670/149‑1 (MQ=255) aGCATCG‑GAT‑TTGTTATGTGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAg < 8:261883/148‑1 (MQ=255) aGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAAc > 2:235876/1‑81 (MQ=255) aGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAAc < 1:235876/81‑1 (MQ=255) gCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAggg < 6:166110/149‑1 (MQ=255) t‑tttttATTAGATCTAATTGGTCAGGAATCGCTGAAAGCCTATTGTGGCCAAATAGGTAAATTTCTATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAAt < 1:170569/148‑1 (MQ=255) tGTTATGAGAACCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATgg < 2:108723/148‑1 (MQ=255) ttATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTa < 6:142265/148‑1 (MQ=255) tATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTaaa > 4:163534/1‑149 (MQ=255) gaTCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAAtt > 4:78771/1‑149 (MQ=255) ccAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAAAAGATAGTCGTGAGAATACGCTTTGGATGATACGAAGGAACGAATACGATAGAAGGGAGTAAATGAAGGCAGCAAATGGTAAACAATTGca > 6:280691/1‑148 (MQ=255) cTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTc < 4:304724/148‑1 (MQ=255) tCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAAtt < 1:107641/138‑1 (MQ=255) tCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAAtt > 2:107641/1‑138 (MQ=255) atttaccTATTGGGCCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCAcc < 3:131368/144‑1 (MQ=255) tttaccTATTGGGCCCCAATAGGTAAATTTCGATAGACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGa > 2:14719/5‑108 (MQ=255) aaaGCCTATTGGTGGACAATAGTTAAATTTCTATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCAcc < 5:281240/148‑1 (MQ=255) aaaGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCt > 4:275748/1‑149 (MQ=255) ttaccTATTGGGCCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTg > 6:327783/4‑149 (MQ=255) aaGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTg < 5:52604/149‑1 (MQ=255) gCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTgg > 5:207722/1‑148 (MQ=255) atATTGGGGCCGAATAGGTAAATTTCGATAAACCGATACTCGTGAGATTTCGCTTTTGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTGGTAt < 4:251756/148‑1 (MQ=255) tATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAgg < 2:361987/87‑1 (MQ=255) aTTGGGCCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGAt > 4:303712/1‑46 (MQ=255) aTTGGGCCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGAt < 3:303712/46‑1 (MQ=255) ggggCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTGGTAtctct < 3:275748/148‑1 (MQ=255) gcggCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTGGTAtctct < 3:163534/146‑1 (MQ=255) gCCCAATAGGTAAATTTCGATAAACCGATAGTCATGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGt < 1:100953/104‑1 (MQ=255) gCCCAATAGGTAAATTTCGATAAACCGATAGTCATGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGt > 2:100953/1‑104 (MQ=255) | GCGATAAGGAAAGCCAAAATCGCAACATGAAAAACAGGCCTGAATAATGACTCGGTTGTCCACTTGCTTTTGCGTCGTCGAGGGCCCGATT‑AAGCATCG‑GAT‑TTGTTATGAGATCCAAGTGCTCAGGAATCGCTGAAAGCCTATTGGGGCCCAATAGGTAAATTTCGATAAACCGATAGTCGTGAGATTTCGCTTTGGATGATACGAAGGAACGAATACGATTGAAGGGAGTAAATGCAGGGAGCAAATGGTAAACAATTGCCCTTTTCAGGTCGTTCCCACCTGGTATCTCT > NC_002947/2224087‑2224379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |