Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,336,497 C→T 10.7% intergenic (‑41/+39) PP_2052 ← / ← PP_5500 bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,336,4970CT10.7% 147.1 / 7.2 57intergenic (‑41/+39)PP_2052/PP_5500bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (24/26);  new base T (2/4);  total (26/31)
Fisher's exact test for biased strand distribution p-value = 6.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.14e-01

AGAGAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTGCGGCG  >  NC_002947/2336350‑2336638
                                                                                                                                                   |                                                                                                                                             
agagAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGc                                                                                                                                               >  7:187562/1‑148 (MQ=255)
agagAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGc                                                                                                                                               >  3:285357/1‑148 (MQ=255)
agagAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGATCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACAGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGc                                                                                                                                               >  5:112017/1‑148 (MQ=255)
 gagaAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCaa                                                                                                                                             <  2:315341/149‑1 (MQ=255)
 gagaAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCaa                                                                                                                                             <  2:311122/149‑1 (MQ=255)
          gcttgAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgag                                                                                                                                     <  5:91784/148‑1 (MQ=255)
          gcttgAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCga                                                                                                                                      <  7:15350/147‑1 (MQ=255)
          gcttgAGTGTCCTGAAGAGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgag                                                                                                                                     <  8:168211/148‑1 (MQ=255)
           cttgAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgaga                                                                                                                                    <  4:301364/148‑1 (MQ=255)
              gAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCTCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgagatg                                                                                                                                  <  8:320651/147‑3 (MQ=255)
                   tCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTAGCCTGCAACAGGCGAGAACGgtgtgt                                                                                                                           >  1:161350/1‑149 (MQ=255)
                     cTGAAGCGCAGGCGCTCGGTGTCGAAGTGGGTGACATCCATATCGACGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGtgtgtg                                                                                                                          <  6:112017/148‑1 (MQ=255)
                      tGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAg                                                                                                                        >  6:297314/1‑149 (MQ=255)
                      tGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAg                                                                                                                        >  6:349107/1‑149 (MQ=255)
                      tGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAg                                                                                                                        >  5:390283/1‑149 (MQ=255)
                       gAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGc                                                                                                                       >  7:154194/1‑149 (MQ=255)
                          gcgcAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGc                                                                                                                    <  5:349107/149‑1 (MQ=255)
                           cgcAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCa                                                                                                                   <  5:297314/149‑1 (MQ=255)
                                gcgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCCTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg                                                                                                              <  1:93397/149‑1 (MQ=255)
                                 cgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGCTGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTgggg                                                                                                             <  1:260536/149‑1 (MQ=255)
                                 cgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTgggg                                                                                                             <  4:285357/149‑1 (MQ=255)
                                 cgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTgggg                                                                                                             <  1:177804/149‑1 (MQ=255)
                                 cgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAAAGGTGTGTGAGCTGCATTgggg                                                                                                             <  8:187562/149‑1 (MQ=255)
                                          tCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAgg                                                                                                    >  1:258688/1‑149 (MQ=255)
                                          tCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAg                                                                                                     <  6:390283/148‑1 (MQ=255)
                                            gAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTc                                                                                                  >  3:60915/1‑149 (MQ=255)
                                            gAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTc                                                                                                  >  6:112486/1‑149 (MQ=255)
                                              agagGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCgg                                                                                                <  8:154194/149‑1 (MQ=255)
                                                agGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCgggg                                                                                              <  6:80571/149‑1 (MQ=255)
                                                  ggTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCggggg                                                                                             <  2:258688/148‑1 (MQ=255)
                                                    tGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcac                                                                                          <  3:248992/149‑1 (MQ=255)
                                                          ccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTc                                                                                    >  3:71395/1‑149 (MQ=255)
                                                           catATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTc                                                                                    <  6:261359/148‑1 (MQ=255)
                                                           caaatCGAAGATGGAGCTGAAAATCTGTTTACCGTGACACTAAAGCATTGCCTGTTGGCCCTTGTCGTTGCGTCAGGCATCTCGCCTGGAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTc                                                                                    <  4:12902/145‑1 (MQ=255)
                                                            atatCGAAGATGGCGGTGAAAATCTGTTTACCGTTTAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTTCGTGAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcac                                                                                          <  8:345800/141‑1 (MQ=255)
                                                            atatCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAAAGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcac                                                                                          >  7:345800/1‑141 (MQ=255)
                                                             tatCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg                                                                                                              >  3:370661/1‑120 (MQ=255)
                                                             tatCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg                                                                                                              <  4:370661/120‑1 (MQ=255)
                                                               tCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAg                                                                               >  3:85278/1‑149 (MQ=255)
                                                               tCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAg                                                                               <  4:60915/149‑1 (MQ=255)
                                                                   aGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAggggg                                                                           <  5:112486/149‑1 (MQ=255)
                                                                     ctGGCGCAGAAACTCTGTTTACCGGTCAAGAACCGCCCTGGCTGTTGCCCCGTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGGGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGAc                                                                         <  8:101135/148‑1 (MQ=255)
                                                                          gcTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCt                                                                      >  5:372616/1‑147 (MQ=255)
                                                                            tGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGAGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAg                                                                   >  5:265929/1‑148 (MQ=255)
                                                                               aaaTCTGTTTACCGTGAAAGTCCAGCATTGGCTGTTGCCCCTTGTCGTTCCGGCAGGCATCTCGCCTGCAACAGGGGAGAACGGTGTGTGCGCTGCCGTGGGGGCAGTCAGGGCGGGGCCACACGTTCGACAGGGGGACGCTCAGGAGt                                                               <  4:85278/149‑1 (MQ=255)
                                                                                     gTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGTGGGACGCTCAGGAGTGACg                                                           >  7:125912/1‑147 (MQ=255)
                                                                                      tttACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTTACg                                                           >  7:122830/1‑146 (MQ=255)
                                                                                       ttACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCa                                                         >  5:68405/1‑147 (MQ=255)
                                                                                                 agaaaAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCACGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAggctg                                             >  5:295372/1‑147 (MQ=255)
                                                                                                   aaaaGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCa                                                                    >  7:336580/1‑124 (MQ=255)
                                                                                                   aaaaGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCa                                                                    <  8:336580/124‑1 (MQ=255)
                                                                                                       gCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAg                                                                   <  3:117109/121‑1 (MQ=255)
                                                                                                       gCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAg                                                                   >  4:117109/1‑121 (MQ=255)
                                                                                                          ttGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGc                                                          >  2:185600/1‑127 (MQ=255)
                                                                                                          ttGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGc                                                          <  1:185600/127‑1 (MQ=255)
                                                                                                                 ttGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTg                             >  5:242635/1‑149 (MQ=255)
                                                                                                                                       cgttctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTg       >  7:39324/4‑149 (MQ=255)
                                                                                                                                          tctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTgcgg    >  7:255126/1‑149 (MQ=255)
                                                                                                                                            tcGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTgcggcg  >  8:228304/1‑149 (MQ=255)
                                                                                                                                             cGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCTGTCAGGTCGGCGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTgcggc   >  5:304006/1‑147 (MQ=255)
                                                                                                                                                   |                                                                                                                                             
AGAGAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTTGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTGCGGCG  >  NC_002947/2336350‑2336638

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: