Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,406,964 A→T 10.3% intergenic (+219/+35) PP_2110 → / ← PP_2111 ribosomal large subunit pseudouridine synthase/aerotaxis receptor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,406,9640AT10.3% 154.3 / 7.6 58intergenic (+219/+35)PP_2110/PP_2111ribosomal large subunit pseudouridine synthase/aerotaxis receptor
Reads supporting (aligned to +/- strand):  ref base A (25/27);  new base T (3/3);  total (28/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01

CCGTATTCGCGGGTAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTGGTCGGCCAGTTC  >  NC_002947/2406824‑2407109
                                                                                                                                             |                                                                                                                                                 
ccGTATTCGCGGGTAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGCTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGGGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGt                                                                                                                                           <  1:251441/149‑1 (MQ=255)
ccGTATTCGCGGGTAAACCCGCTCCTACATGGACCGGGCGGGACGCGCATCAGTGGTTCGACACAGGCATCGCCGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCg                                                                                                                                             <  5:269019/147‑1 (MQ=255)
     ttCGCGGGTAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCCCAGCCGTTGTAGGAGCGGGTTCCCCCGCGAACACCGGCAGAGCCGGTGCCAt                                                                                                                                      >  5:126250/1‑149 (MQ=255)
      gagcgGGTTTACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCTAAACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGGGCCATc                                                                                                                                     >  8:218752/3‑149 (MQ=38)
       cgcgGGTAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATc                                                                                                                                     <  7:27185/148‑1 (MQ=255)
        gcgGGTAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGGGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGGGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCTCTGCCGGTgttcgcg                                                                                                                                    <  7:230319/148‑7 (MQ=38)
             tAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCg                                                                                                                              <  6:280659/149‑1 (MQ=255)
               aaCCCGCTCCTACATGGACCGGGCTGGACGCGCATCACTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCgg                                                                                                                             >  2:186141/1‑148 (MQ=255)
                 cccGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGCCACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAg                                                                                                                          >  7:163540/1‑149 (MQ=255)
                        cTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCg                                                                                                                     <  6:302278/147‑1 (MQ=255)
                        cTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGa                                                                                                                    <  2:114725/148‑1 (MQ=255)
                          aCATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCt                                                                                                                 >  3:35530/1‑149 (MQ=255)
                            aTGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTc                                                                                                               <  1:144134/149‑1 (MQ=255)
                                aCCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGaa                                                                                                                           <  8:88845/133‑1 (MQ=255)
                                aCCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGaa                                                                                                                           >  7:88845/1‑133 (MQ=255)
                                 ccGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCgg                                                                                                          <  1:186141/149‑1 (MQ=255)
                                  cGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGa                                                                                                                    <  3:99058/138‑1 (MQ=255)
                                  cGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGa                                                                                                                    >  4:99058/1‑138 (MQ=255)
                                      cTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTGGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGaa                                                                                                     <  8:163540/149‑1 (MQ=255)
                                             cgcATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTcc                                                                                              <  6:227430/149‑1 (MQ=255)
                                              gcATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTcca                                                                                             >  2:347594/1‑149 (MQ=255)
                                              gcATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTcca                                                                                             >  4:57533/1‑149 (MQ=255)
                                              gcATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTcca                                                                                             <  6:171745/149‑1 (MQ=255)
                                              gcATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTAGGGACAGCCGTTGTAGGAGCGGGTTCACCCCCGAACACCCGCAGAGCCGGTGCCATACCCAGCGGAACTCTCGAACTTCAGCCTTTGCATCCCTcca                                                                                             >  8:179418/1‑149 (MQ=37)
                                                   aGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGc                                                                                        <  4:129859/149‑1 (MQ=255)
                                                     tGGTTCGACACAGGCATCGACGGCCCGGCGACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGc                                                                                        >  1:28200/1‑148 (MQ=255)
                                                          cGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATAc                                                                                  <  3:57533/148‑1 (MQ=255)
                                                           gACCCAGGCATCGACGGCCCGGC‑ACAGCATCGGGGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACt                                                                                 <  6:126250/148‑1 (MQ=255)
                                                            acacAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTgg                                                                               >  2:241415/1‑149 (MQ=255)
                                                             aacaGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTgg                                                                               <  7:179418/147‑1 (MQ=255)
                                                              acaGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCt                                                                             <  5:86310/149‑1 (MQ=255)
                                                                    aTCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGtt                                                                                                        >  6:127831/1‑116 (MQ=255)
                                                                    aTCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGtt                                                                                                        <  5:127831/116‑1 (MQ=255)
                                                                        aCGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTg                                                                   >  2:172043/1‑149 (MQ=255)
                                                                           gCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTg                                                                <  1:241415/149‑1 (MQ=255)
                                                                             ccGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTg                                                                >  5:199741/1‑147 (MQ=255)
                                                                             ccGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTg                                                                <  6:199741/147‑1 (MQ=255)
                                                                                gC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAg                                                           <  7:218752/149‑1 (MQ=255)
                                                                                   acaGCATCGCTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTAACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGt                                                          >  8:199838/1‑148 (MQ=255)
                                                                                       cATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGttcttc                                                     >  8:285748/1‑149 (MQ=255)
                                                                                              ggtTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTcag                                               >  5:344655/1‑148 (MQ=255)
                                                                                                    gCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGcc                                        >  8:243657/1‑149 (MQ=255)
                                                                                                                tAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTgcgc                             <  4:35530/148‑1 (MQ=255)
                                                                                                                 aGGAGCGGGTTCACCCGCGAACACCGGCAGAGACGGTGCCATCCCCTGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCTCCAGCGATTACTGGCTTCCCGCGGTGGTGGTCAGTTCTTCGCTCAGGAGTGCCGAGTGCTGCGCCt                           >  5:314727/1‑149 (MQ=38)
                                                                                                                  ggAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTg                          <  2:28200/149‑1 (MQ=255)
                                                                                                                   gAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGt                         <  1:172043/149‑1 (MQ=255)
                                                                                                                         gTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTcggcg                   >  2:154693/1‑149 (MQ=255)
                                                                                                                              cccGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTg              >  8:62489/1‑149 (MQ=255)
                                                                                                                               ccGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTgg             >  7:194548/1‑149 (MQ=255)
                                                                                                                               ccGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTgg             <  7:84705/149‑1 (MQ=255)
                                                                                                                                 gcgAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTGGTc           >  2:128599/1‑149 (MQ=255)
                                                                                                                                 gatggcacCGGCTCTGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGc                                         <  6:353784/114‑1 (MQ=255)
                                                                                                                                 gatggcacCGGCTCTGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGc                                         >  5:353784/6‑119 (MQ=255)
                                                                                                                                  atggcacCGGCTCTGCCGGTGTCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTcggcg                   <  4:256722/136‑1 (MQ=255)
                                                                                                                                  atggcacCGGCTCTGCCGGTGTCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTcggcg                   >  3:256722/5‑140 (MQ=255)
                                                                                                                                   tggcacCGGCTCTGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTGGTCgg         >  6:122058/4‑149 (MQ=255)
                                                                                                                                      cacCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTGGTCGGc        >  4:361145/1‑147 (MQ=255)
                                                                                                                                          ggCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTGGTCGGCCAGTTc  <  1:347594/149‑1 (MQ=255)
                                                                                                                                             |                                                                                                                                                 
CCGTATTCGCGGGTAAACCCGCTCCTACATGGACCGGGCTGGACGCGCATCAGTGGTTCGACACAGGCATCGACGGCCCGGC‑ACAGCATCGGTGGTTCGGCACAGCCGTTGTAGGAGCGGGTTCACCCGCGAACACCGGCAGAGCCGGTGCCATCCCCAGCGGAAGTCTCGAGCTTCAGCGGTTGAAGCGCTCCACCAGCGAATACTGGCTACCCGCCGTGCTGGTCAGTTCTTCGCTCAGCAGTGCCGAGTGCTGCGCCTGTTCGGCGGTCTGGTCGGCCAGTTC  >  NC_002947/2406824‑2407109

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑