| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,149,241 | A→C | 5.1% | K150Q (AAG→CAG) | PP_2765 → | sulfonate monooxygenase MsuD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,149,241 | 0 | A | C | 5.1% | 254.4 / 4.1 | 79 | K150Q (AAG→CAG) | PP_2765 | sulfonate monooxygenase MsuD |
| Reads supporting (aligned to +/- strand): ref base A (38/36); new base C (2/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.01e-01 | |||||||||||
TTGGCAAGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGCCGCGCGCGACATGGCCTC > NC_002947/3149094‑3149386 | ttGGCAAGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGaa < 1:72934/149‑1 (MQ=255) ggCAAGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAg < 8:14266/148‑1 (MQ=255) aaGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCa > 2:13322/1‑149 (MQ=255) aaGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCa > 7:302077/1‑149 (MQ=255) aGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCAt > 4:47924/1‑149 (MQ=255) cATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCt < 4:177893/149‑1 (MQ=255) gACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGa < 4:131359/148‑1 (MQ=255) gTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAg > 5:261491/1‑148 (MQ=255) ttCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGa < 6:261491/149‑1 (MQ=255) aCCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACaa > 1:370625/1‑149 (MQ=255) gcgGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAAttt < 7:345570/149‑1 (MQ=255) ggCCGCATCTCCATCAACGTGGTGTGCGGCTGGTTCAAGGGCGCGTTCCGCGCCATCTGAGAGACATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TTCCCTGAAGGGCATCTGGACCCAGGACAATTTCAg < 6:313385/149‑1 (MQ=255) aTCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTcaa > 5:73184/1‑147 (MQ=255) aTCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCa > 5:256523/1‑149 (MQ=255) gCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACgg < 5:335995/149‑1 (MQ=255) cAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGAtt > 4:35953/1‑149 (MQ=255) cGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCt < 2:370625/149‑1 (MQ=255) gtggtgTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTa < 1:13322/149‑1 (MQ=255) gtggtgTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTa < 2:160485/149‑1 (MQ=255) ggtgTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTccc > 2:47066/1‑149 (MQ=255) gtgtCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCg > 8:219808/1‑149 (MQ=255) tCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGttt < 7:219808/149‑1 (MQ=255) cGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTc < 5:320575/148‑1 (MQ=255) ggCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCaa > 6:150233/1‑149 (MQ=255) cTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCGCCGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAAc < 1:303512/149‑1 (MQ=255) cTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCa > 2:207721/1‑146 (MQ=255) gTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGAc > 1:301528/1‑148 (MQ=255) tCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGACTGGACCATGATGAGCGCTATCGCCCATCCGAGGAGTTCATTCG‑TGCACTGAAGAGAATCTGGACCCAGGACAATTTCAGCTTCAAAGGCGATTTCTACCGTTTCAACGAGTa > 1:248840/1‑148 (MQ=255) cAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTaca > 8:210868/1‑149 (MQ=255) gggCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACAcc > 4:338262/1‑148 (MQ=255) gTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTcaagc > 1:44437/1‑149 (MQ=255) ttCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTACCACGGCGATTTCTACCGTTTCAACGACTACACCCTcaagcc > 8:101763/1‑149 (MQ=255) cATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGAt > 2:44331/1‑109 (MQ=255) cATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGAt < 1:44331/109‑1 (MQ=255) cATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTcaagcc < 8:50810/141‑1 (MQ=255) cATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTcaagcc > 7:50810/1‑141 (MQ=255) tCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCa > 1:220773/1‑93 (MQ=255) tCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCa < 2:220773/93‑1 (MQ=255) ggCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTgc < 1:172883/148‑1 (MQ=255) gCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTgcag < 3:338262/149‑1 (MQ=255) gAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGA‑CCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCaa > 3:148016/1‑149 (MQ=255) aTGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCg > 7:142621/1‑148 (MQ=255) tGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCTATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCa < 5:150233/149‑1 (MQ=255) ggCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTgca > 2:107335/1‑139 (MQ=255) ggCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTgca < 1:107335/139‑1 (MQ=255) gCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCAc < 1:252242/148‑1 (MQ=255) aCCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGa > 6:219569/1‑148 (MQ=255) aCCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGa > 1:2740/1‑148 (MQ=255) atgaGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCtt < 7:210868/148‑1 (MQ=255) tgaGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCCACCGCACCCGGAAATcgtg > 4:118092/1‑145 (MQ=255) gaGCGCTATCGCCGATCCGAGGAGTACAATCG‑TGCCCTGAAGCGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGAATTCTACCGATTCAACGACTACACCCACAAGCCCAAGCCGCTGCAGTAACCGCACCCGGAAATCTTc > 3:244884/1‑147 (MQ=255) tCGCCGATCCGAGGAGTTCATTCG‑TGCCCTTTAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCgg < 2:248840/147‑1 (MQ=255) tCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACGGCACCCGGAAATCTTCCAGGGCgg < 1:207721/147‑1 (MQ=255) tCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCgg < 6:256523/147‑1 (MQ=255) tCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGa < 8:142621/149‑1 (MQ=255) gCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAg > 2:366133/1‑148 (MQ=255) gCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGc > 5:193383/1‑149 (MQ=255) cGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTc < 2:2740/149‑1 (MQ=255) gaggagTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAggg < 2:319732/134‑1 (MQ=255) gaggagTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGc > 7:229473/1‑149 (MQ=255) aggagTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGcc < 3:47924/149‑1 (MQ=255) ggagTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCACGCGGGCcg > 2:262924/1‑149 (MQ=255) gTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGCcgcgc < 5:219569/149‑1 (MQ=255) ttCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCgg < 5:375929/131‑1 (MQ=255) ttCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCgg > 6:375929/1‑131 (MQ=255) cATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGCcgcgcgc < 1:47066/148‑1 (MQ=255) cagatGCCCTTCAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGa < 5:390192/125‑1 (MQ=255) cagatGCCCTTCAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGa > 6:390192/5‑129 (MQ=255) cG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGCCGCGCGCGACa < 3:35953/148‑1 (MQ=255) gatGCCCTTCAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGa < 2:247999/125‑1 (MQ=255) gatGCCCTTCAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGa > 1:247999/3‑127 (MQ=255) g‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCt < 6:170411/114‑1 (MQ=255) g‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCt > 5:170411/1‑114 (MQ=255) g‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGCCGCGCGCGACATg > 2:370048/1‑149 (MQ=255) cctGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTGCAACGACTACACCCCCACGCCCAAGCCGCTGCAGCACCCGCACCCGGACATCTTCCAGGGCGGGAGCTCGCGGGCCGCGCGCGACa < 5:359627/146‑1 (MQ=255) cccTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCt > 4:368553/1‑111 (MQ=255) cccTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCt < 3:368553/111‑1 (MQ=255) ccTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAATCCCAAGCCGCt < 6:171158/87‑1 (MQ=255) ccTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCt > 5:171158/1‑87 (MQ=255) cTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGGGGGCCGCGCGCGACATGGCCTc > 5:340378/1‑149 (MQ=255) | TTGGCAAGCATCGACCAGTTCACCGCGGGCCGCATCGCCATCAACGTGGTGTCCGGCTGGTTCAAGGGCGAGTTCCGCGCCATCGGCGAGCCATGGCTGGACCATGATGAGCGCTATCGCCGATCCGAGGAGTTCATTCG‑TGCCCTGAAGGGCATCTGGACCCAGGACAATTTCAGCTTCCACGGCGATTTCTACCGTTTCAACGACTACACCCTCAAGCCCAAGCCGCTGCAGCAACCGCACCCGGAAATCTTCCAGGGCGGGAGCTCGCGGGCCGCGCGCGACATGGCCTC > NC_002947/3149094‑3149386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |