Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,155,398 | G→T | 5.9% | R289R (CGA→AGA) | PP_2771 ← | sigma‑54 dependent transcriptional regulator |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,155,398 | 0 | G | T | 5.9% | 220.9 / 2.7 | 68 | R289R (CGA→AGA) | PP_2771 | sigma‑54 dependent transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base G (37/27); new base T (2/2); total (39/29) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 |
GATGTTGCGGCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGTTTTCCAGCT > NC_002947/3155258‑3155544 | gctGTAGCGGCTCAGGCCCAGCAGCCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACt < 7:265302/147‑1 (MQ=255) ttGCGGCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGttc > 6:96325/1‑149 (MQ=255) gCGGCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGttctt > 5:82525/1‑149 (MQ=255) cGGCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGttcttc > 6:347593/1‑149 (MQ=255) cGGCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGttctt < 1:232783/148‑1 (MQ=255) gCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCgg > 1:242248/1‑149 (MQ=255) cTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGTTGCTGCGAGCCTTTCAGCGCCTGttcgaggag > 8:176858/1‑143 (MQ=37) cTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGTTGCTGCGAGCCTTTCAGCGCCTGttcgaggag > 8:287521/1‑143 (MQ=37) cTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGTTGCTGCGAGCCTTTCAGCGCCTGttcgaggag < 7:287521/149‑7 (MQ=37) cTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGTTGCTGCGAGCCTTTCAGCGCCTGttcgaggag < 7:176858/149‑7 (MQ=37) aGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGgcg < 5:96325/147‑1 (MQ=255) cagcagGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTcgg > 5:75188/1‑149 (MQ=255) agcagGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTcggc > 3:83692/1‑149 (MQ=255) agcagGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTcggc > 6:92567/1‑149 (MQ=255) tGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCt > 8:303543/1‑148 (MQ=255) gtgtGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCgg < 5:347593/149‑1 (MQ=255) gtgCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGc > 4:145502/1‑148 (MQ=255) cACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACt > 4:120963/1‑149 (MQ=255) aCCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACtt > 5:43497/1‑149 (MQ=255) ccTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTg > 7:22217/1‑149 (MQ=255) ggTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTcc > 7:109730/1‑149 (MQ=255) gTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCt < 4:53561/149‑1 (MQ=255) gTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCt < 6:75188/149‑1 (MQ=255) gCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCCGTCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTg < 1:316192/148‑1 (MQ=255) gCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTgg < 4:83692/148‑1 (MQ=255) cAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGgc < 5:298574/148‑1 (MQ=255) cAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGgc < 8:22217/148‑1 (MQ=255) cAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGa < 2:183190/131‑1 (MQ=255) cAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGa > 1:183190/1‑131 (MQ=255) aGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATg > 4:282568/1‑149 (MQ=255) aaaCGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATgcg > 5:188832/1‑149 (MQ=255) aTAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGt < 4:37015/149‑1 (MQ=255) aTAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGt > 3:220246/1‑149 (MQ=255) aTAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGt > 3:37015/1‑149 (MQ=255) tGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAgg > 7:108606/1‑149 (MQ=255) gCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGgc > 7:92180/1‑149 (MQ=255) gCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGt > 8:85119/1‑135 (MQ=255) gCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGt < 7:85119/135‑1 (MQ=255) gTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGgacgtcgt > 4:110649/1‑149 (MQ=255) tCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGgtcgtcgtc < 2:242248/149‑1 (MQ=255) cc‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCtt < 7:177840/80‑1 (MQ=255) cc‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCtt > 8:177840/1‑80 (MQ=255) tCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACt < 6:117368/64‑1 (MQ=255) cGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGAc > 1:339800/1‑128 (MQ=255) cTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCAc > 3:53982/1‑147 (MQ=255) cGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCa > 3:67773/1‑149 (MQ=255) gTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGcc < 8:92180/147‑1 (MQ=255) gTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCAt > 8:38766/1‑149 (MQ=255) gTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTAACCGGCGACTTGTCCTGCCGCTCGATGCGCAGGTGCGACAGGCGAAGGTCCTCGTCCAGCCCCAGGCCAt > 6:209996/1‑149 (MQ=255) gCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTg > 8:310918/1‑149 (MQ=255) gCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTg > 8:305324/1‑149 (MQ=255) aGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCg < 4:220246/149‑1 (MQ=255) gccgccGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCgg > 6:180908/1‑148 (MQ=255) cgccgGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGca > 6:198342/1‑148 (MQ=255) ctcctcGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAgg < 3:145502/148‑1 (MQ=255) ctcGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGgtgt > 7:127798/1‑149 (MQ=255) cAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGa < 4:67773/149‑1 (MQ=255) aGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGAt < 8:108606/149‑1 (MQ=255) gcgcTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTgtggt < 4:261317/143‑1 (MQ=255) gcgcTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTgtggt > 3:261317/1‑143 (MQ=255) cgcTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGAc > 7:74606/1‑149 (MQ=255) gcTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACg > 3:292560/1‑149 (MQ=255) gcTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACg < 7:303543/149‑1 (MQ=255) aaaGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGttt < 5:180908/148‑1 (MQ=255) aaaGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGtt < 5:92567/147‑1 (MQ=255) aGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGTTTTcc < 4:292560/149‑1 (MQ=255) aGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGTTTTcc < 6:188832/149‑1 (MQ=255) tCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGTTTTCCAGCt > 5:345770/1‑149 (MQ=255) | GATGTTGCGGCTCAGGCCCAGCAGGCTGGCCGTGTGCACCTGGTTGCAGTGGCAGAAACGATAGGCACTGCGTAGCAGGCTGTCC‑TCGACCTTCTCGTGCAGGCCGCCGGCCTGCTCCTCGAACAGGCGCTGAAAGGCTCGCAGCAACTGTTCTTCGGCGCTTTCGGCGGTGCTCACCGGCGACTTGTCCTGGCGCTCGATGCGCAGGTGCGACAGGCGCAGGTCGTCGTCCTGCACCAGGCCATTGCGGCACACCAGCAGGGTGTGGTGGATGACGTTTTCCAGCT > NC_002947/3155258‑3155544 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |