| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,171,961 | G→C | 6.9% | R78P (CGG→CCG) | PP_2784 → | short‑chain dehydrogenase/reductase family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,171,961 | 0 | G | C | 6.9% | 272.7 / 8.8 | 87 | R78P (CGG→CCG) | PP_2784 | short‑chain dehydrogenase/reductase family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (41/40); new base C (4/2); total (45/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.06e-01 | |||||||||||
GAGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGA > NC_002947/3171813‑3172108 | gAGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCg > 6:326781/1‑149 (MQ=255) aGCACCTTTTGATCTTACTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCgg < 4:357116/149‑1 (MQ=255) gCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCggg > 8:352818/1‑149 (MQ=255) cTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCgg > 4:73953/1‑149 (MQ=255) ttttGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGc > 6:105842/1‑149 (MQ=255) ttGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGc < 3:149606/147‑1 (MQ=255) ttGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGc < 8:129296/147‑1 (MQ=255) aTCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTg < 6:307954/148‑1 (MQ=255) ttgcttgATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGa > 5:81025/1‑149 (MQ=255) ttgcttgATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGa > 7:175835/1‑149 (MQ=255) ttgcttgATCGGGATCTGGAAACCTTGCAGGGGTGGGTCACCGATGGCGAATTTGACGCTCTTATCGAAACCCATCAAGC‑GAACATCGCAGATCTCTCCAGCAGGCAACTTATGTTAAAGTGCCTGGCCGACCGGGTCGGCTTTGTCGa > 2:260689/1‑149 (MQ=255) gcttgATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGa < 5:301373/147‑1 (MQ=255) cttgATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACACATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGAtgt < 6:140615/149‑1 (MQ=255) ttgATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGAtgtg > 2:162017/1‑149 (MQ=255) gATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCt > 2:235445/1‑149 (MQ=255) aTCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTg < 3:224150/149‑1 (MQ=255) ggCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAgcg > 3:260787/1‑149 (MQ=255) gCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTg > 4:67926/1‑138 (MQ=255) gCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTg < 3:67926/138‑1 (MQ=255) gCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAgcgc > 1:15099/1‑149 (MQ=255) aaCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCg > 6:355628/1‑149 (MQ=255) aCCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCgg < 7:260552/149‑1 (MQ=255) ccTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCggg < 5:149228/149‑1 (MQ=255) gCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGCGGAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTc > 1:289696/1‑149 (MQ=255) ggggTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCAATCTCGCCAGCCTGCAACTTCTGTTCAATGGCCTGGCCGACCGGGTCGGCTTTGTc > 7:359892/1‑118 (MQ=255) gggtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcga > 7:326069/1‑149 (MQ=255) gggtgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcga < 8:326069/149‑1 (MQ=255) tgggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGcgacga < 8:42108/149‑1 (MQ=255) ggtCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACgag > 4:322162/1‑148 (MQ=255) tCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCt > 3:323454/1‑105 (MQ=255) tCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCt < 4:323454/105‑1 (MQ=255) tCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAgaac > 2:73834/1‑149 (MQ=255) tCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAgaac < 2:15099/149‑1 (MQ=255) tCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAgaac < 1:235445/149‑1 (MQ=255) cGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTg < 5:154681/135‑1 (MQ=255) cGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTg > 6:154681/1‑135 (MQ=255) gCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCg > 5:163389/1‑147 (MQ=255) gAATTTGCCGCTCGTATCGAAACCCATCAAGA‑GAACATCGCCGATCTCTCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGa < 6:81025/149‑1 (MQ=255) aTTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGAcc > 2:317415/1‑149 (MQ=255) tttGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGAGCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCt < 5:326781/149‑1 (MQ=255) gCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGa > 8:356128/1‑149 (MQ=255) ccGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGa < 2:243193/148‑1 (MQ=255) ccGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGAc < 2:289696/149‑1 (MQ=255) cGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGAc > 4:355151/1‑148 (MQ=255) gCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACaa < 6:163389/149‑1 (MQ=255) atCGTATCGAAACCAATCAAGC‑GAACATCTCCGATATCTCAAGCATGCAACTTCTGTTCACTGGCCTGGCCGACAGGGTAGGATTTGTCGATGTGCTGTTCAACAGCGCCGGTGTATGCGACGAGAACGAACCCGAAGACCTCGACAAc < 1:260689/148‑1 (MQ=255) gTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTg < 5:105842/148‑1 (MQ=255) tCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTc < 7:99202/83‑1 (MQ=255) tCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTc > 8:99202/1‑83 (MQ=255) gAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGcaca < 3:322162/148‑1 (MQ=255) aaaCCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAg < 5:355628/149‑1 (MQ=255) aaCCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAgg < 3:73953/149‑1 (MQ=255) tCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTAAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCAttt < 7:352818/149‑1 (MQ=255) gC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGAt < 1:162017/149‑1 (MQ=255) gC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGAt > 6:94637/1‑149 (MQ=255) c‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGAt > 7:144101/1‑148 (MQ=255) c‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATc < 4:260787/149‑1 (MQ=255) c‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATc < 8:175835/149‑1 (MQ=255) aCATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAAc < 3:355151/149‑1 (MQ=255) aCATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAAc < 8:144101/149‑1 (MQ=255) cATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAAcc > 5:243466/1‑149 (MQ=255) aTCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTCGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACa > 2:34176/1‑79 (MQ=255) aTCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTCGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACa < 1:34176/79‑1 (MQ=255) gCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCAc < 1:73834/146‑1 (MQ=255) gCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCtt > 6:141401/1‑149 (MQ=255) cAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCtttt < 1:317415/149‑1 (MQ=255) cAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCAc > 4:204157/1‑149 (MQ=255) aCTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCt < 3:204157/149‑1 (MQ=255) ttCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCg > 6:328078/1‑149 (MQ=255) ttCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCg > 4:336686/1‑149 (MQ=255) tCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCg < 5:81080/92‑1 (MQ=255) tCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCg > 6:81080/1‑92 (MQ=255) tCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGt > 3:127123/1‑149 (MQ=255) tCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCGTTTACGTCACCTCGt > 7:129604/1‑149 (MQ=255) ttCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgtg > 5:25537/1‑149 (MQ=255) ttCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTtgtg > 3:249428/1‑149 (MQ=255) aaGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGtgcct > 6:357396/1‑149 (MQ=255) aaGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGtgcct > 3:109848/1‑149 (MQ=255) aaGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTATTACGTCACCTCGATGtgcct > 7:331395/1‑149 (MQ=255) gggCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGtgcctgc > 2:202069/1‑149 (MQ=255) ggCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGtgcctgc > 4:202074/1‑148 (MQ=255) acaaagCCGACCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCCACATCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCa > 1:230758/6‑149 (MQ=255) acaaagCCGACCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCtttt < 6:148787/121‑1 (MQ=255) acaaagCCGACCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCtttt > 5:148787/6‑126 (MQ=255) acaaagCCGACCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGt < 6:281066/125‑1 (MQ=255) acaaagCCGACCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGt > 5:281066/6‑130 (MQ=255) acaaagCCGACCCGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCa > 4:185514/6‑149 (MQ=255) gACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGc < 5:318143/149‑1 (MQ=255) cGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGa < 4:109848/149‑1 (MQ=255) cGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGa < 5:94637/149‑1 (MQ=255) | GAGCACCTTTTGATCTTGCTTGATCGGGATCTGGCAACCTTGCAGGGGTGGGTCACCGAGGGCGAATTTGCCGCTCGTATCGAAACCCATCAAGC‑GAACATCGCCGATCTCGCCAGCCTGCAACTTCTGTTCAAGGGCCTGGCCGACCGGGTCGGCTTTGTCGATGTGCTGGTCAACAGCGCCGGGGTCTGCGACGAGAACGAACCCGAAGACCTCGACAACTGGCACAAGGTCATTTCGATCAACCTCAACGGCACCTTTTACGTCACCTCGTTGTGCCTGCCACTGATGGCGGA > NC_002947/3171813‑3172108 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |